Properties
| Property Name | Value |
|---|
| TranscriptId | 584998 |
| Track | FilteredModels2 |
| ProteinId | 584912 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:911092..912840 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3204 ID=mRNA_3204|Name=jgi.p|Nanoce1779_2|584912|organism=Nannochloropsis oceanica|type=mRNA|length=1749bp
ATGACCAAGTCCTCGTGAGTAAGTGGGACTAGGAGTTCATGGTCTGCTGG
CTTGCTTGACCCTGTTCGTGTTGGGGTGTTAAGTTGAACGATGAGAAGAC
TTTGAGTCCATGCAATTCCACTGTGCCGACAGGTTAAATAAGGATAGCCT
CATACAGGTACTCTCTATGTAGACACATCGACGCAATCTTGACAATTATT
TTTGGTCCTGGGCTTATGTCAAGGTTTTCCGAAGTTTCGACGGCCCCTCC
TTGCATCATCGTCATCAGCCCCGCACTGCAGCCGGCACCCTTTTATCGAC
CTTCATTTCTCATCCCCTTTCCCCATTCCTACACCACACACAGGACATGT
CCTCGTTCGTCATATCTCCAGCGGAAAACAGTGGCGGCGAAGCGGCTCCT
GATGGCGGGGCAAGCACGCAGGAAACCCAAGACCCTCCGCACCAGGCTTA
CGATGAAGGAGGAGGAGGTTCTTTCGTAGAAGACATGGTCTACCAGCGCG
ACGTATCAATGGAGCTGGCCCGCAAGCTGGCCCAGGACCTGGACGCCAAG
AAGGGTTTGCTGAGTGGCCGGTTGGAAAACGCTTTGAGACTGTCAGCGGA
GGCGGAAGTAAGACTAGGCAAGGCAAATCGGGAGTACCAGGTGAAGCACT
TGACGCTGCGGAAGCGTATGCTGACAGTTGTGGCCACGTTAGCCTTGGCG
TCTTTCATTGGCTGGTTGGTGAGTGCGTTGATCACACAAAAGTTTTCTTT
GGGGGCGGTACTTATTCTTCCCTTGTCGCTGGCGATGGGCATCCATCTGT
TTGGCAAATTGGAAGGGGAGGATGGACTGCTGCAGCTGGCCCGGTCGTGA
GAGAGTGCGCGGGCATGATTTGAAGGACTCACAAATGCACTCGCTGACAC
GCGCAAAATATTCTCTATAGATAACAAAACGCGCATAAAGAATTGGAAAC
GGGTTTTGGCTGTTGACGGGCTCTCTTGGGCCTCCTTGTTGCGCAGGAGC
TGAAAACGGAAATCTGACGGGGAATATTCTGCATCATGATTAATGGTTTA
TTTCCTTCTATTTTATATTCACATATACCTTTTTCTGCTCGCCACCCCTC
CTTATCTCGTTATATTCACATTTGTGTGCCGTGCTTTGTTTTGCTTTGTT
GCCTCTCGTGTGCCTCCTTGTCTCAAGGCGAACGAGACCTTTCTGCCCGT
CTCCGCGGAGGGGTGGGGCTCCGCCGATCTGACCTTCGGCTCCTATCTCT
ACTCCTGCTGCTGCTGCTGCAGTTGTCTCTTCTCATTTTTCCTGTCCCGC
CTCGGTCGTAGCCTCTGTCCCTCTCCCTCTCCCTACCCCTCTCCCTACTC
CGATCATCTCGCTCCATCTCACGCCGTGGAGACAAGCGCGGGTAACCTCC
CTCCCTGCTTCTACTGCGGCTAGAATGTCTTCGTCGGGCATCCCATCGCC
CCCCTTCTACCGTCCCTCCTTCCTCCTCCTCCTCTCGCTTTCTCCTCCCT
CTCCCGCTTGAGCTCAAGCTTCTACTTCGTGAGCGACGATAAGGCTCACC
TTCCTCCCTTTGCCTCCCCCTCTCCCTCCCTTGATACTCCTCGTCCCTGT
GGTGCATATGCTTGTTCGTAGCTCGAGTTCTATCCGCACCAGCTGTGCCA
GCAGCAACAGCAGCTGCAGCCGTCGTCTTCAACTCCCCACCACCACCCAA
AGACGAAGACGACGAAGAAGGGCAATAATGATCCACATTCCTCCTCTGC back to topprotein sequence of jgi.p|Nanoce1779_2|584912 >mRNA_3204-protein ID=mRNA_3204-protein|Name=jgi.p|Nanoce1779_2|584912|organism=Nannochloropsis oceanica|type=polypeptide|length=168bp
MSSFVISPAENSGGEAAPDGGASTQETQDPPHQAYDEGGGGSFVEDMVYQ
RDVSMELARKLAQDLDAKKGLLSGRLENALRLSAEAEVRLGKANREYQVK
HLTLRKRMLTVVATLALASFIGWLVSALITQKFSLGAVLILPLSLAMGIH
LFGKLEGEDGLLQLARS* back to topmRNA from alignment at scaffold_7:911092..912840+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3204 ID=mRNA_3204|Name=jgi.p|Nanoce1779_2|584912|organism=Nannochloropsis oceanica|type=mRNA|length=1749bp|location=Sequence derived from alignment at scaffold_7:911092..912840+ (Nannochloropsis oceanica)
ATGACCAAGTCCTCGTGAGTAAGTGGGACTAGGAGTTCATGGTCTGCTGG
CTTGCTTGACCCTGTTCGTGTTGGGGTGTTAAGTTGAACGATGAGAAGAC
TTTGAGTCCATGCAATTCCACTGTGCCGACAGGTTAAATAAGGATAGCCT
CATACAGGTACTCTCTATGTAGACACATCGACGCAATCTTGACAATTATT
TTTGGTCCTGGGCTTATGTCAAGGTTTTCCGAAGTTTCGACGGCCCCTCC
TTGCATCATCGTCATCAGCCCCGCACTGCAGCCGGCACCCTTTTATCGAC
CTTCATTTCTCATCCCCTTTCCCCATTCCTACACCACACACAGGACATGT
CCTCGTTCGTCATATCTCCAGCGGAAAACAGTGGCGGCGAAGCGGCTCCT
GATGGCGGGGCAAGCACGCAGGAAACCCAAGACCCTCCGCACCAGGCTTA
CGATGAAGGAGGAGGAGGTTCTTTCGTAGAAGACATGGTCTACCAGCGCG
ACGTATCAATGGAGCTGGCCCGCAAGCTGGCCCAGGACCTGGACGCCAAG
AAGGGTTTGCTGAGTGGCCGGTTGGAAAACGCTTTGAGACTGTCAGCGGA
GGCGGAAGTAAGACTAGGCAAGGCAAATCGGGAGTACCAGGTGAAGCACT
TGACGCTGCGGAAGCGTATGCTGACAGTTGTGGCCACGTTAGCCTTGGCG
TCTTTCATTGGCTGGTTGGTGAGTGCGTTGATCACACAAAAGTTTTCTTT
GGGGGCGGTACTTATTCTTCCCTTGTCGCTGGCGATGGGCATCCATCTGT
TTGGCAAATTGGAAGGGGAGGATGGACTGCTGCAGCTGGCCCGGTCGTGA
GAGAGTGCGCGGGCATGATTTGAAGGACTCACAAATGCACTCGCTGACAC
GCGCAAAATATTCTCTATAGATAACAAAACGCGCATAAAGAATTGGAAAC
GGGTTTTGGCTGTTGACGGGCTCTCTTGGGCCTCCTTGTTGCGCAGGAGC
TGAAAACGGAAATCTGACGGGGAATATTCTGCATCATGATTAATGGTTTA
TTTCCTTCTATTTTATATTCACATATACCTTTTTCTGCTCGCCACCCCTC
CTTATCTCGTTATATTCACATTTGTGTGCCGTGCTTTGTTTTGCTTTGTT
GCCTCTCGTGTGCCTCCTTGTCTCAAGGCGAACGAGACCTTTCTGCCCGT
CTCCGCGGAGGGGTGGGGCTCCGCCGATCTGACCTTCGGCTCCTATCTCT
ACTCCTGCTGCTGCTGCTGCAGTTGTCTCTTCTCATTTTTCCTGTCCCGC
CTCGGTCGTAGCCTCTGTCCCTCTCCCTCTCCCTACCCCTCTCCCTACTC
CGATCATCTCGCTCCATCTCACGCCGTGGAGACAAGCGCGGGTAACCTCC
CTCCCTGCTTCTACTGCGGCTAGAATGTCTTCGTCGGGCATCCCATCGCC
CCCCTTCTACCGTCCCTCCTTCCTCCTCCTCCTCTCGCTTTCTCCTCCCT
CTCCCGCTTGAGCTCAAGCTTCTACTTCGTGAGCGACGATAAGGCTCACC
TTCCTCCCTTTGCCTCCCCCTCTCCCTCCCTTGATACTCCTCGTCCCTGT
GGTGCATATGCTTGTTCGTAGCTCGAGTTCTATCCGCACCAGCTGTGCCA
GCAGCAACAGCAGCTGCAGCCGTCGTCTTCAACTCCCCACCACCACCCAA
AGACGAAGACGACGAAGAAGGGCAATAATGATCCACATTCCTCCTCTGC back to topCoding sequence (CDS) from alignment at scaffold_7:911092..912840+ >mRNA_3204 ID=mRNA_3204|Name=jgi.p|Nanoce1779_2|584912|organism=Nannochloropsis oceanica|type=CDS|length=504bp|location=Sequence derived from alignment at scaffold_7:911092..912840+ (Nannochloropsis oceanica)
ATGTCCTCGTTCGTCATATCTCCAGCGGAAAACAGTGGCGGCGAAGCGGC
TCCTGATGGCGGGGCAAGCACGCAGGAAACCCAAGACCCTCCGCACCAGG
CTTACGATGAAGGAGGAGGAGGTTCTTTCGTAGAAGACATGGTCTACCAG
CGCGACGTATCAATGGAGCTGGCCCGCAAGCTGGCCCAGGACCTGGACGC
CAAGAAGGGTTTGCTGAGTGGCCGGTTGGAAAACGCTTTGAGACTGTCAG
CGGAGGCGGAAGTAAGACTAGGCAAGGCAAATCGGGAGTACCAGGTGAAG
CACTTGACGCTGCGGAAGCGTATGCTGACAGTTGTGGCCACGTTAGCCTT
GGCGTCTTTCATTGGCTGGTTGGTGAGTGCGTTGATCACACAAAAGTTTT
CTTTGGGGGCGGTACTTATTCTTCCCTTGTCGCTGGCGATGGGCATCCAT
CTGTTTGGCAAATTGGAAGGGGAGGATGGACTGCTGCAGCTGGCCCGGTC
GTGA back to top
|