jgi.p|Nanoce1779_2|629606, mRNA_3897 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|629606
Unique Name	mRNA_3897
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4349
Alignment location	scaffold_8:333263..338521 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	629692
Track	FilteredModels2
ProteinId	629606

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_8	supercontig	scaffold_8:333263..338521 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|629606	gene_3897	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|629606	mRNA_3897-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3897	CDS_3897	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_8:333263..338521+
coding sequence from alignment at scaffold_8:333263..338521+

mRNA sequence

>mRNA_3897 ID=mRNA_3897|Name=jgi.p|Nanoce1779_2|629606|organism=Nannochloropsis oceanica|type=mRNA|length=4349bp
GATCGAAATATGTGGTATTTCGTGATATTTTTTCAGTTAAACCATGGCCG
ACGTCGATCTCACCTTAGAATCAGAACAACCCTTCAGAAAGCGAAGCAAA
CGAAGCGAACAACCCCTCTTCGTGCATCTCTTACTGAGGCATACCATTCT
TCTTGCATTTCCGCTGGCTTACATTGTTGGCAAGCCCCCCAAAGGGAGGA
GCCGGCTGCAACGATGGCTGTCGCAGCCGAAACTTGACTTTGCATGACCT
GCTGCTGGTAGTGGTGGTGGAAGTAAAGGTGGTGCGGGTCCTGGTGTCCG
CCACCTCCATGCCAGTCAAACGAGTCTTGGTTGGAAGGCCTCTACTCTTC
CTCTTTAACATGCCTTGGAGCCACGTCAATGACGATTCGCCTATTTGTCT
TGCCCTTGAGCAGTTCCTCCGTCAAATCGATGACCTTTCCGTCGGGCGTC
TGCACAGACACGTCCTCGTATTCCCACCTCTCCATCCCCTCTCGTTCCCC
TCCCATCTCCTCTTCATGCCGACTCGCCACCACCTGAACAAACATCTCCC
TTGGTTTACTCGAGGCCACCAAAAATTGCATCACAACATGCTTGTCTGCT
CCATTCACCACCTGCATACTCATCTTATGCAAACCCGTCGTATGAAAATC
CGTCCCGTATCTCCCCAACTTCGGGTGCACATTAATAATCTCCAACACGT
CGCGTTCGATCGAACCGCGCGCATTCTTCAACCCATCCAACATCACACCG
TCCGTCATCATGTCAATCAACGGCCCAAAGAACGATGGCGGTGCCCCTGG
AGGCCTCTGTCTCCGCATCACCTGCCGCATCAAATGCGGTTGCCGATTCA
AAAGTTTAAACCCGGCAAACGCCACCAAAAACAAGACAGCAAATGCCGTT
GAAGTCGCGAAGAGGGAGACCGCTAATACACCAACTCCAATCACAAAAAT
CGTTCCATAGAATACTTGAGCAAACCAGGGTAAGCCCAACTGGCGAATGA
ATTTCGGGGACCAAAAATGACGGCATGTCGCAGAAGAAGAGGGAAGGGAG
TGGAGGAGGGGCGAGAGGAGACGTTGTGTGCGAAGGGAGGAGGAGATAAT
GGCTTGCGTCATGATTCCTCGTTTTTGTGGGAAAAAAGAGGAGGAGGAGA
AGAAGGATAAGGAGGAGGAGGAGGAGGAGGATAAGGAGGAGGAGGAGGAG
GAGTAGGAGGAGGAGTAGGAGGAGGAGGAGGAAGGGTGGAAAGAGCACGA
GAGGAGTGAGGAAAGCGGTGCTATTGGCGAGATCTCAGACGAAGGAGAGG
ATAGCGATCGTCGTGGACCTCTTTGAGCTGATGCAGCTACTGCTGTCAAC
TCCAGAGTCAACGAGGGACGGGGTGTGACCGTGATATGACTGATGGTGGT
GTTGGGAAGGGTGGAAGAAGAAGCAGCGGGCTTGGGTGGCGATGTCCATA
CATGCGGGTATGGTCTTATTGTCGTCGTCACTGCTGCCGCTGCTGACACT
TGTATCCTATTTGTCGCCCTGGCACTGGTGCTGGCATGGCTTCCTGCACA
GAGGGGGACATACCAGGTGCCGACGTGGCGGAACACCAACCGTTGCGCTG
CCTTCATTTTGTGACCCCCCTTGTGTTCTTGTTTTCAAAATTGCCTGCAT
GGTTTGTTTCGTTTTTGGTTGTTTGAAAGAAAGGGGCCATGAAAATAAAT
GATATTGACACCAGTGAATATATAGTCAGAGAATTTCTCTCTTCCTCTCG
CCTTTCTGCTCCTCCCGCTCCTTGTCATCGTGTCTCGTTGTATGTGCGTC
TTTTACCATCAGCTTACTAGAATGATGTGCTCATGTGGCGGAAGGATCAA
ACTTGGAAAGAGTTGTCGCGAGAGAAACCTTTCGCACATATCCGCGTCGG
GCATGAGTGCATTATCCGGTCGCGCGTTTCCCTCAAAAAAGGAAAAAACG
TATTAAAAAGAGAGTTGACTCCTTCCTCGTTTGGGAAGAGGACCACATGC
ATACATACACACAAATCCCCAAAGCGAGGCAAAAAGAAGCCTTCTTCTCT
CGCATGACCGTCGCGTCTGGGTCGTGCTAAAACGTGGAGGAAAGTAGATG
GGCGCCTTACCCCCAGAAGGAAGGCGCAGCTCTCTTCCACGGGAACAGGA
CATGCATGTCTCGCCAGTCACAAGACCAACGACACACACTTGCCCCTCCG
ACCTATTCGTCTTGAATTGAGTTTCTTCTTGTCACGAAGACAAGCAGTGT
CCTGTCTGCCTTTATAAAGCAGCCAAACATCTCACAGCTGCCCACCATAA
AATATAAGACAGGGTTCTCCCTCCCTCCCTCTCTCCCTCCCCACGCATAC
CCTCCTTCGGCCACAAGGACACTGAAAAGGGAGGCAGGCGCAAAAGATGA
AAGCGAAGTACTAAAAGGTATCTGTGCTCTACTCCCGCCTTTACAATGCA
CATTTCGTGGACTCATAAATGGCATCGAGTATCAGGAGCGTTCGTGCCGC
CGGTCAAGGCACAACACGCTATGGCAACCCACCCTGGACGCAGTCACGAC
AAGTTTCTAATCATTTGGAAAAAGACAAAACACAAAACATCACCACTATT
CTGAGGAGAGGGGTAGAGATATGCGGCGTGCAAGAGCCTAGGGCGTTCGA
TCAATTGCGAAACTTGTGTTCGGACTGACTTACTTCGTGTTGCCGATGCT
GGCTGCGGCGGTAGCAGTGCCCGTTGAGGTTGCCAGAGCAAGAGGCGCAA
GGTTCCAGGCGGGCTCACACGACAAGCATCACAAGCAGCGAGTTGATCCT
TAGCCTGGGATTAAGGTGGAGACAGGGTCGTGGCATCAGCGTGAAAAAAG
TTGGTGTGAAACGAAGTGTGCAGGAGCAGCCCGGAGAAAGGCAGTGCAAG
GTGTTAGGAGGTTGGAGAAGGGGGCATGGGAAGAACTTTAGCAGGCGTCC
TTACACACAGGAAACACAGAATTACATGGCACGCTAGCAGCTACTTACTC
TTCTATAGCTATGCAAGCCTCCTATGCAGCTATGATCCGGTGTCCAAGGC
ATTTTTGCTCGTTGAGGACCGCAAGCCTCCTCATGAACATCATCAGTCAT
CCCATGCTTCACCCAACGCAATCCAACCCCAACACAGCACCATGGAGCTC
TTTGTGGTGCTGCCCGCCACGACCAGCAGCGGCAGCACGTCGCGCACGGT
GGCGCTCGAGGTGGGCTCCGCGGGATCAACGACAGTCAGGGATCTGAAAG
AGGCCATCCAACATCGCAGCGCGCAGGTGTACGGCTCCACCAAGACCACA
TGCGGCATCCACAACATCAGCAAGAGCCGCAAGAGCACGGTAGAGAAACA
AGAGGAAGAATGCTTGAAAGGGATTCCTGCAGGGTTGCAGCGTTTGACAC
TGGGGGGCCGGCATTTGCGGGATGAGCAGACGCTGGCAGAAAGCGCGGTT
GTCGGCCATACCACCCTCCACCTCCTCCTTCCCCTCCCCGGCGGCATCGA
CTTCCAACACCGGGATGGTTCCAAATTCGGCGGTGGCGGACAAATGTCCG
AATCGCTGGCCAACGCCGACCGGCGGGAACGCCTGCGGAAGCTGGCTTTG
GAGACGATCGACTTGAATAAAGATCCGTATTTTATGCGCAATCACCTGGG
TTCCTACGAATGCAAGCTGTGCTTAACTCTTCACAACAATGAAGGGAATT
ACTTGGCCCACACTCAGGGGAAACGGCACCAGGAGAATTTGGCGCGGAGG
GCAGCGAAGGAGGCTAAGGAGCAGCAGTATCGCCCCAACAAGCCAACGGT
CGTGGCAGCCCGAAGAGTGATGAAAATCGGGAGGCCAGGGTACAAGGTGA
CCAAGGCAAGGGATCTAAGCACGCGGCAACGGTCGTTGATATTTGAAATC
GACTATCCCCAGGCCGAGGAAGACGTCCAGCCGCGGCACCGGTTTATGAG
CGCGTTTGAGCAACGGGTTGATAGCACCAAGGACCGGGAGTGGCAGTACC
TGCTGTTTGCCTGTGAGCCATACGAGACGGTGGGGTTCAAGATTCCCAAC
GTAGAGATAGATAAGGGAGAGGGGCGGTTCTCTTCGTCGTGGGATGGAAA
GGCCAAGAAGTTTGTGTTGCAGTTGTACTTCCGTATTAGGGGGGAAGGGG
TTTTCGTGTCACGGATGGGTGCATGGATAGATTGGTAGCGTGGTGAGACG
GAAGGGATAAAAAGGAAGAGGAGAAATAGGTGAGCCATGAGAATATGGAC
AAGGATAAAAAGAAGCACGTCAAGAAGATCCAGAAAGGCTGTGCAAAACA
AGGGCGGCAATCAGACCATGAAGAAGAACAAGAGACAACGACGCAAAAA

protein sequence of jgi.p|Nanoce1779_2|629606

>mRNA_3897-protein ID=mRNA_3897-protein|Name=jgi.p|Nanoce1779_2|629606|organism=Nannochloropsis oceanica|type=polypeptide|length=421bp
MGRTLAGVLTHRKHRITWHASSYLLFYSYASLLCSYDPVSKAFLLVEDRK
PPHEHHQSSHASPNAIQPQHSTMELFVVLPATTSSGSTSRTVALEVGSAG
STTVRDLKEAIQHRSAQVYGSTKTTCGIHNISKSRKSTVEKQEEECLKGI
PAGLQRLTLGGRHLRDEQTLAESAVVGHTTLHLLLPLPGGIDFQHRDGSK
FGGGGQMSESLANADRRERLRKLALETIDLNKDPYFMRNHLGSYECKLCL
TLHNNEGNYLAHTQGKRHQENLARRAAKEAKEQQYRPNKPTVVAARRVMK
IGRPGYKVTKARDLSTRQRSLIFEIDYPQAEEDVQPRHRFMSAFEQRVDS
TKDREWQYLLFACEPYETVGFKIPNVEIDKGEGRFSSSWDGKAKKFVLQL
YFRIRGEGVFVSRMGAWIDW*

mRNA from alignment at scaffold_8:333263..338521+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3897 ID=mRNA_3897|Name=jgi.p|Nanoce1779_2|629606|organism=Nannochloropsis oceanica|type=mRNA|length=5259bp|location=Sequence derived from alignment at scaffold_8:333263..338521+ (Nannochloropsis oceanica)
GATCGAAATATGTGGTATTTCGTGATATTTTTTCAGTTAAACCATGGCCG
ACGTCGATCTCACCTTAGAATCAGAACAACCCTTCAGAAAGCGAAGCAAA
CGAAGCGAACAACCCCTCTTCGTGCATCTCTTACTGAGGCATACCATTCT
TCTTGCATTTCCGCTGGCTTACATTGTTGGCAAGCCCCCCAAAGGGAGGA
GCCGGCTGCAACGATGGCTGTCGCAGCCGAAACTTGACTTTGCATGACCT
GCTGCTGGTAGTGGTGGTGGAAGTAAAGGTGGTGCGGGTCCTGGTGTCCG
CCACCTCCATGCCAGTCAAACGAGTCTTGGTTGGAAGGCCTCTACTCTTC
CTCTTTAACATGCCTTGGAGCCACGTCAATGACGATTCGCCTATTTGTCT
TGCCCTTGAGCAGTTCCTCCGTCAAATCGATGACCTTTCCGTCGGGCGTC
TGCACAGACACGTCCTCGTATTCCCACCTCTCCATCCCCTCTCGTTCCCC
TCCCATCTCCTCTTCATGCCGACTCGCCACCACCTGAACAAACATCTCCC
TTGGTTTACTCGAGGCCACCAAAAATTGCATCACAACATGCTTGTCTGCT
CCATTCACCACCTGCATACTCATCTTATGCAAACCCGTCGTATGAAAATC
CGTCCCGTATCTCCCCAACTTCGGGTGCACATTAATAATCTCCAACACGT
CGCGTTCGATCGAACCGCGCGCATTCTTCAACCCATCCAACATCACACCG
TCCGTCATCATGTCAATCAACGGCCCAAAGAACGATGGCGGTGCCCCTGG
AGGCCTCTGTCTCCGCATCACCTGCCGCATCAAATGCGGTTGCCGATTCA
AAAGTTTAAACCCGGCAAACGCCACCAAAAACAAGACAGCAAATGCCGTT
GAAGTCGCGAAGAGGGAGACCGCTAATACACCAACTCCAATCACAAAAAT
CGTTCCATAGAATACTTGAGCAAACCAGGGTAAGCCCAACTGGCGAATGA
ATTTCGGGGACCAAAAATGACGGCATGTCGCAGAAGAAGAGGGAAGGGAG
TGGAGGAGGGGCGAGAGGAGACGTTGTGTGCGAAGGGAGGAGGAGATAAT
GGCTTGCGTCATGATTCCTCGTTTTTGTGGGAAAAAAGAGGAGGAGGAGA
AGAAGGATAAGGAGGAGGAGGAGGAGGAGGATAAGGAGGAGGAGGAGGAG
GAGTAGGAGGAGGAGTAGGAGGAGGAGGAGGAAGGGTGGAAAGAGCACGA
GAGGAGTGAGGAAAGCGGTGCTATTGGCGAGATCTCAGACGAAGGAGAGG
ATAGCGATCGTCGTGGACCTCTTTGAGCTGATGCAGCTACTGCTGTCAAC
TCCAGAGTCAACGAGGGACGGGGTGTGACCGTGATATGACTGATGGTGGT
GTTGGGAAGGGTGGAAGAAGAAGCAGCGGGCTTGGGTGGCGATGTCCATA
CATGCGGGTATGGTCTTATTGTCGTCGTCACTGCTGCCGCTGCTGACACT
TGTATCCTATTTGTCGCCCTGGCACTGGTGCTGGCATGGCTTCCTGCACA
GAGGGGGACATACCAGGTGCCGACGTGGCGGAACACCAACCGTTGCGCTG
CCTTCATTTTGTGACCCCCCTTGTGTTCTTGTTTTCAAAATTGCCTGCAT
GGTTTGTTTCGTTTTTGGTTGTTTGAAAGAAAGGGGCCATGAAAATAAAT
GATATTGACACCAGTGAATATATAGTCAGAGAATTTCTCTCTTCCTCTCG
CCTTTCTGCTCCTCCCGCTCCTTGTCATCGTGTCTCGTTGTATGTGCGTC
TTTTACCATCAGCTTACTAGAATGATGTGCTCATGTGGCGGAAGGATCAA
ACTTGGAAAGAGTTGTCGCGAGAGAAACCTTTCGCACATATCCGCGTCGG
GCATGAGTGCATTATCCGGTCGCGCGTTTCCCTCAAAAAAGGAAAAAACG
TATTAAAAAGAGAGTTGACTCCTTCCTCGTTTGGGAAGAGGACCACATGC
ATACATACACACAAATCCCCAAAGCGAGGCAAAAAGAAGCCTTCTTCTCT
CGCATGACCGTCGCGTCTGGGTCGTGCTAAAACGTGGAGGAAAGTAGATG
GGCGCCTTACCCCCAGAAGGAAGGCGCAGCTCTCTTCCACGGGAACAGGA
CATGCATGTCTCGCCAGTCACAAGACCAACGACACACACTTGCCCCTCCG
ACCTATTCGTCTTGAATTGAGTTTCTTCTTGTCACGAAGACAAGCAGTGT
CCTGTCTGCCTTTATAAAGCAGCCAAACATCTCACAGCTGCCCACCATAA
AATATAAGACAGGGTTCTCCCTCCCTCCCTCTCTCCCTCCCCACGCATAC
CCTCCTTCGGCCACAAGGACACTGAAAAGGGAGGCAGGCGCAAAAGATGA
AAGCGAAGTACTAAAAGGTATCTGTGCTCTACTCCCGCCTTTACAATGCA
CATTTCGTGGACTCATAAATGGCATCGAGTATCAGGAGCGTTCGTGCCGC
CGGTCAAGGCACAACACGCTATGGCAACCCACCCTGGACGCAGTCACGAC
AAGTTTCTAATCATTTGGAAAAAGACAAAACACAAAACATCACCACTATT
CTGAGGAGAGGGGTAGAGATATGCGGCGTGCAAGAGCCTAGGGCGTTCGA
TCAATTGCGAAACTTGTGTTCGGACTGACTTACTTCGTGTTGCCGATGCT
GGCTGCGGCGGTAGCAGTGCCCGTTGAGGTTGCCAGAGCAAGAGGCGCAA
GGTTCCAGGCGGGCTCACACGACAAGCATCACAAGCAGCGAGTTGATCCT
TAGCCTGGGATTAAGGTGGAGACAGGGTCGTGGCATCAGCGTGAAAAAAG
TTGGTGTGAAACGAAGTGTGCAGGAGCAGCCCGGAGAAAGGCAGTGCAAG
GTGTTAGGAGGTTGGAGAAGGGGGCATGGGAAGAACTTTAGCAGGCGTCC
TTACACACAGGAAACACAGAATTACATGGCACGCTAGCAGCTACTTACTC
TTCTATAGCTATGCAAGCCTCCTATGCAGCTATGATCCGGTGTCCAAGGC
ATTTTTGCTCGTTGAGGACCGCAAGCCTCCTCATGAACATCATCAGTCAT
CCCATGCTTCACCCAACGCAATCCAACCCCAACACAGCACCATGGAGCTC
TTTGTGGTGCTGCCCGCCACGACCAGCAGCGGCAGCACGTCGCGCACGGT
GGCGCTCGAGGTGGGCTCCGCGGGATCAACGACAGTCAGGGATCTGAAAG
AGGCCATCCAACATCGCAGCGCGCAGGTGTACGGCTCCACCAAGACCACA
TGCGGCATCCACAACATCAGCAAGAGCCGCAAGAGCACGGTAGAGAAACA
AGAGGAAGAATGCTTGAAAGGGATTCCTGCAGGGTTGCAGCGTTTGACAC
TGGGGGGCCGGCATTTGCGGGATGAGCAGACGCTGGCAGAAAGCGCGGTT
GTCGGGTACGTAAGACATGCATCACTTGTGTCTGTGTATCTATGAACCCA
CGCTCTTGCCAAAGACTGGCTGTTGTCCGCTCTTGTACTGCTGCAGGCAC
CTTCTTCATTATTTTCCTCTGCCTGTGTATGATCGGTAAGAACGGAGTAT
CCCTCGCTTCTCTGGGGGACCGCCTCAAGCCCCATGGCGTTCAAGTCCCT
TCATGGACCTCCAAAAATTACAGTGCTAAGAACGCATGTGTGTATATTCC
AGTGTATCCATGTGTGTGTGTTCCCTTTTCTCGCCTGCTTGACCGACTGA
CTTCTCTTGCTGTGGTGAGGGAGGGAGGAAGGGAGGGAGGGAGGGAAGGC
ACACGCGCACACCTACAGGGAGGCACACACATGTCACTGGCTGTCTTCTA
CGACTGTGGTGCAGAAAGATTTATCTTTCCACGGACAGATACGGACCGTA
TATTTAAACCCTCTTTTTCCTTCCCCTACCCCTCTCGGTCCTTTTCACTC
CGTCAGCTCATCTTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCTACGT
TTTTCCCACCCCCCACCCACAGCCATACCACCCTCCACCTCCTCCTTCCC
CTCCCCGGCGGCATCGACTTCCAACACCGGGATGGTTCCAAATTCGGCGG
TGGCGGACAAATGTCCGAATCGCTGGCCAACGCCGACCGGCGGGAACGCC
TGCGGAAGCTGGCTTTGGAGACGATCGACTTGAATAAAGATCCGTATTTT
ATGCGCAATCACCTGGGTTCCTACGAATGCAAGCTGTGCTTAACTCTTCA
CAACAATGAAGGGAATTACTTGGCCCACACTCAGGGGAAACGGCACCAGG
AGAATTTGGCGCGGAGGGCAGCGAAGGAGGCTAAGGAGCAGCAGTATCGC
CCCAACAAGCCAACGGTCGTGGCAGCCCGAAGAGTGATGAAAATCGGGAG
GCCAGGGTACAAGGTGACCAAGGCAAGGGATCTAAGCACGCGGCAACGGT
CGTTGATATTTGAAATCGACTATCCCCAGGCCGAGGAAGACGTCCAGCCG
CGGCACCGGTTTATGAGCGCGTTTGAGCAACGGGTTGATAGCACCAAGGA
CCGGGAGTGGCAGTACCTGCTGTTTGCCTGTGAGCCATACGAGACGGTGG
GGTTCAAGATTCCCAACGTAGAGATAGATAAGGGAGAGGGGCGGTTCTCT
TCGTCGTGGGATGGAAAGGCCAAGAAGTTTGTGTTGCAGTTGTACTTCCG
TGAGAAGGGGGCCGAAGGGGGAGGAAGGGAGGGAGGGAGGGGGACGCCAG
TCCCTGATCATTTGCAGAGGAATGAGGGAAGAGGGCCATCTCCGCGGGGG
GGAGGAGCGGGCATAATGTATGGTGGTGGGCACCAGCAGCAACAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGATGTATCCTCCTCCTCCTC
CACCACCGCACTTACAGCAGCATTTGAGAGGTGTCGGTCAGCCTCCTCCT
CCTCCTCCCCCTCCTCCTGGGCGACCGGGAGGAGGGTTCGGAGGGTATGG
AGGGGGAGCACCCCCTCCTCCTCCTCCTCCCCCTCCTCCTAGGTATTAGG
GGGGAAGGGGTTTTCGTGTCACGGATGGGTGCATGGATAGATTGGTAGCG
TGGTGAGACGGAAGGGATAAAAAGGAAGAGGAGAAATAGGTGAGCCATGA
GAATATGGACAAGGATAAAAAGAAGCACGTCAAGAAGATCCAGAAAGGCT
GTGCAAAACAAGGGCGGCAATCAGACCATGAAGAAGAACAAGAGACAACG
ACGCAAAAA

Coding sequence (CDS) from alignment at scaffold_8:333263..338521+

>mRNA_3897 ID=mRNA_3897|Name=jgi.p|Nanoce1779_2|629606|organism=Nannochloropsis oceanica|type=CDS|length=3789bp|location=Sequence derived from alignment at scaffold_8:333263..338521+ (Nannochloropsis oceanica)
ATGGGAAGAACTTTAGCAGGCGTCCTTACACACAGGAAACACAGAATTAC
ATGGCACGCTAGCAGCTACTTACTCTTCTATAGCTATGCAAGCCTCCTAT
GCAGCTATGATCCGGTGTCCAAGGCATTTTTGCTCGTTGAGGACCGCAAG
CCTCCTCATGAACATCATCAGTCATCCCATGCTTCACCCAACGCAATCCA
ACCCCAACACAGCACCATGGAGCTCTTTGTGGTGCTGCCCGCCACGACCA
GCAGCGGCAGCACGTCGCGCACGGTGGCGCTCGAGGTGGGCTCCGCGGGA
TCAACGACAGTCAGGGATCTGAAAGAGGCCATCCAACATCGCAGCGCGCA
GGTGTACGGCTCCACCAAGACCACATGCGGCATCCACAACATCAGCAAGA
GCCGCAAGAGCACGGTAGAGAAACAAGAGGAAGAATGCTTGAAAGGGATT
CCTGCAGGGTTGCAGCGTTTGACACTGGGGGGCCGGCATTTGCGGGATGA
GCAGACGCTGGCAGAAAGCGCGGTTGTCGGCCATACCACCCTCCACCTCC
TCCTTCCCCTCCCCGGCGGCATCGACTTCCAACACCGGGATGGTTCCAAA
TTCGGCGGTGGCGGACAAATGTCCGAATCGCTGGCCAACGCCGACCGGCG
GGAACGCCTGCGGAAGCTGGCTTTGGAGACGATCGACTTGAATAAAGATC
CGTATTTTATGCGCAATCACCTGGGTTCCTACGAATGCAAGCTGTGCTTA
ACTCTTCACAACAATGAAGGGAATTACTTGGCCCACACTCAGGGGAAACG
GCACCAGGAGAATTTGGCGCGGAGGGCAGCGAAGGAGGCTAAGGAGCAGC
AGTATCGCCCCAACAAGCCAACGGTCGTGGCAGCCCGAAGAGTGATGAAA
ATCGGGAGGCCAGGGTACAAGGTGACCAAGGCAAGGGATCTAAGCACGCG
GCAACGGTCGTTGATATTTGAAATCGACTATCCCCAGGCCGAGGAAGACG
TCCAGCCGCGGCACCGGTTTATGAGCGCGTTTGAGCAACGGGTTGATAGC
ACCAAGGACCGGGAGTGGCAGTACCTGCTGTTTGCCTGTGAGCCATACGA
GACGGTGGGGTTCAAGATTCCCAACGTAGAGATAGATAAGGGAGAGGGGC
GGTTCTCTTCGTCGTGGGATGGAAAGGCCAAGAAGTTTGTGTTGCAGTTG
TACTTCCGTATTAGGGGGGAAGGGGTTTTCGTGTCACGGATGGGTGCATG
GATAGATTGGTAGATGGGAAGAACTTTAGCAGGCGTCCTTACACACAGGA
AACACAGAATTACATGGCACGCTAGCAGCTACTTACTCTTCTATAGCTAT
GCAAGCCTCCTATGCAGCTATGATCCGGTGTCCAAGGCATTTTTGCTCGT
TGAGGACCGCAAGCCTCCTCATGAACATCATCAGTCATCCCATGCTTCAC
CCAACGCAATCCAACCCCAACACAGCACCATGGAGCTCTTTGTGGTGCTG
CCCGCCACGACCAGCAGCGGCAGCACGTCGCGCACGGTGGCGCTCGAGGT
GGGCTCCGCGGGATCAACGACAGTCAGGGATCTGAAAGAGGCCATCCAAC
ATCGCAGCGCGCAGGTGTACGGCTCCACCAAGACCACATGCGGCATCCAC
AACATCAGCAAGAGCCGCAAGAGCACGGTAGAGAAACAAGAGGAAGAATG
CTTGAAAGGGATTCCTGCAGGGTTGCAGCGTTTGACACTGGGGGGCCGGC
ATTTGCGGGATGAGCAGACGCTGGCAGAAAGCGCGGTTGTCGGCCATACC
ACCCTCCACCTCCTCCTTCCCCTCCCCGGCGGCATCGACTTCCAACACCG
GGATGGTTCCAAATTCGGCGGTGGCGGACAAATGTCCGAATCGCTGGCCA
ACGCCGACCGGCGGGAACGCCTGCGGAAGCTGGCTTTGGAGACGATCGAC
TTGAATAAAGATCCGTATTTTATGCGCAATCACCTGGGTTCCTACGAATG
CAAGCTGTGCTTAACTCTTCACAACAATGAAGGGAATTACTTGGCCCACA
CTCAGGGGAAACGGCACCAGGAGAATTTGGCGCGGAGGGCAGCGAAGGAG
GCTAAGGAGCAGCAGTATCGCCCCAACAAGCCAACGGTCGTGGCAGCCCG
AAGAGTGATGAAAATCGGGAGGCCAGGGTACAAGGTGACCAAGGCAAGGG
ATCTAAGCACGCGGCAACGGTCGTTGATATTTGAAATCGACTATCCCCAG
GCCGAGGAAGACGTCCAGCCGCGGCACCGGTTTATGAGCGCGTTTGAGCA
ACGGGTTGATAGCACCAAGGACCGGGAGTGGCAGTACCTGCTGTTTGCCT
GTGAGCCATACGAGACGGTGGGGTTCAAGATTCCCAACGTAGAGATAGAT
AAGGGAGAGGGGCGGTTCTCTTCGTCGTGGGATGGAAAGGCCAAGAAGTT
TGTGTTGCAGTTGTACTTCCGTATTAGGGGGGAAGGGGTTTTCGTGTCAC
GGATGGGTGCATGGATAGATTGGTAGATGGGAAGAACTTTAGCAGGCGTC
CTTACACACAGGAAACACAGAATTACATGGCACGCTAGCAGCTACTTACT
CTTCTATAGCTATGCAAGCCTCCTATGCAGCTATGATCCGGTGTCCAAGG
CATTTTTGCTCGTTGAGGACCGCAAGCCTCCTCATGAACATCATCAGTCA
TCCCATGCTTCACCCAACGCAATCCAACCCCAACACAGCACCATGGAGCT
CTTTGTGGTGCTGCCCGCCACGACCAGCAGCGGCAGCACGTCGCGCACGG
TGGCGCTCGAGGTGGGCTCCGCGGGATCAACGACAGTCAGGGATCTGAAA
GAGGCCATCCAACATCGCAGCGCGCAGGTGTACGGCTCCACCAAGACCAC
ATGCGGCATCCACAACATCAGCAAGAGCCGCAAGAGCACGGTAGAGAAAC
AAGAGGAAGAATGCTTGAAAGGGATTCCTGCAGGGTTGCAGCGTTTGACA
CTGGGGGGCCGGCATTTGCGGGATGAGCAGACGCTGGCAGAAAGCGCGGT
TGTCGGCCATACCACCCTCCACCTCCTCCTTCCCCTCCCCGGCGGCATCG
ACTTCCAACACCGGGATGGTTCCAAATTCGGCGGTGGCGGACAAATGTCC
GAATCGCTGGCCAACGCCGACCGGCGGGAACGCCTGCGGAAGCTGGCTTT
GGAGACGATCGACTTGAATAAAGATCCGTATTTTATGCGCAATCACCTGG
GTTCCTACGAATGCAAGCTGTGCTTAACTCTTCACAACAATGAAGGGAAT
TACTTGGCCCACACTCAGGGGAAACGGCACCAGGAGAATTTGGCGCGGAG
GGCAGCGAAGGAGGCTAAGGAGCAGCAGTATCGCCCCAACAAGCCAACGG
TCGTGGCAGCCCGAAGAGTGATGAAAATCGGGAGGCCAGGGTACAAGGTG
ACCAAGGCAAGGGATCTAAGCACGCGGCAACGGTCGTTGATATTTGAAAT
CGACTATCCCCAGGCCGAGGAAGACGTCCAGCCGCGGCACCGGTTTATGA
GCGCGTTTGAGCAACGGGTTGATAGCACCAAGGACCGGGAGTGGCAGTAC
CTGCTGTTTGCCTGTGAGCCATACGAGACGGTGGGGTTCAAGATTCCCAA
CGTAGAGATAGATAAGGGAGAGGGGCGGTTCTCTTCGTCGTGGGATGGAA
AGGCCAAGAAGTTTGTGTTGCAGTTGTACTTCCGTATTAGGGGGGAAGGG
GTTTTCGTGTCACGGATGGGTGCATGGATAGATTGGTAG

Synonyms

Publications