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Properties
| Property Name | Value |
|---|
| TranscriptId | 529757 |
| Track | FilteredModels2 |
| ProteinId | 529671 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:439967..441983 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6064 ID=mRNA_6064|Name=jgi.p|Nanoce1779_2|529671|organism=Nannochloropsis oceanica|type=mRNA|length=1752bp
ATGGGGCTGTACGATTTGCTCGCAGTCGGCATCGGTGGCACAGTTGGAAG
CGGGGTATTTGTCCTAGCAGGGGAGATTGCCAATGCGCCTGACTTGCCTG
CAGGACCTTCGGTTGTTCTTTCTTTTGCGGCTGCGGGCTTGGGGTGTGTC
CTGAGTGGCCTCTCATTTGCCGAGTTGGCGAGTCGCATTCATGCGGACGG
GAGCTCCTACATTTATGCATACGTGAACTTGGGGGAGGTCTTTGCGTTTG
TGGCTGGCTGTTGTCTGACCCTAGAATATGGCATCAGCAGTGCTGCCGTG
GCGAGAAACTGGGGCGACAAGCTCGGAGCTTGGGTAGATCACATGCATCC
ACACGACGCCAGCGAGGGTTCTGTCTGGCACCCGGGCAGTGGGGAGGCAA
CGGGTTTCTTCCGCGATTTCAATATCTACGCGGGGGCGATTGAGCTGGTG
TGTATGTGCATTATTCTTCGAGGGATGAATGTGAGTAAAATCACTGTGGA
TGTCATAACAATAGCGAAGTTGTTGCTGGTTGTGTTCATGACCATCACCG
GCTTTTCGTTTTTAAGGCCGAGTAATCTTGAGCCGTTTGCACCCAGTGGG
TTTCGAGGCATTTTCAGAGGAGGGACAAGGTGTTTTTTCGGATATCTGGG
CTTTGACGAGGTGTGCTGCATGGGCGGAGAAGCGAAGAATCCGTCAAAAA
GCATACCGTTGGCGGTGATGGGAACCATCTCGGTGGTGACAGTGCTGTAC
ATCTTGGCGTCGTTGGCCTTGGTGGGGATGCAGCCTTTTGCGGATATTAC
TCCTTCTTCCGGGTTTGCCGAGGCGTTTCGGTTCAATAACCTGGGTTGGG
CCGCGAATACCGTGACGGCTGGAGAGCTACTGACGCTACCACTAGTGGTA
TTGGTCTCGCTGCTCGCCCAACCCCGCCTTCAATATGCTATGGCCCAAGA
TGGATTACTCCCCGCTGTCTTCGGTCACGTGGACCGGAACGGAAATCTCT
TCAAAGGCACGTTGATCGCGGGAACGGTGGGTGTGGTCGTAGCATTATTT
TTGCCATTTCGTGCATTGGAGGACGTGATCAGCGCCGGGGTGCTCATTGC
CTTTAACCTCACCAACACTGCCCTGGTTGTCTCCCGTCGAGTCCATCCGA
TCCGGCCTTCCGCCAATCGTACCTTAGCTCTAGCATTCAACGTCCTCGCA
TTAAGTGCATGTTTCATGTGGAAAAACCTCGGGACCATTCTCCCCTGGCT
ACCGCTTAATGTACTGGTGACCGCCGCGGCAGTGGTACCTCTTGTGTTGC
TGCATGTGACTTGCCCAGATCATCCTTCGCAGGACGGACATTTTACTACC
CCGCTTGTACCGTGGGTGCCGGCTTTAGGGAGTGCTTTCAACTGGTTTTT
GTTGACACAGTTGTCGTGGGAGGGGTTGGGTTTAGTCTTGGCCTTCCTGG
GAGGGTCTCTTTTTTTGTATGCAACTTATGGATGGAGGAACTCGAAGGGG
GGAAAGACGGGGTGGATGGAGGTGTTGGCGGCCTCGGTACGCAGGCATTC
GCGGCATCCAAGTGAGGTGGATCCCGGGTTAATAGAGGGGTTGTTGGGGG
AGGGGGAGGGGGAGGGAGGCGAGGAGCATTTACGTGGGGGTCGAAGGGGT
GGTAAGGAGAAAGAGGGAGATGGGGGGCAGGAGGGACAGAGGCAAGCCGT
ACAAGAGGTGCAACCTGATCTGCGGAAAGCGGGCGATATGATTTCTACTT
GA back to topprotein sequence of jgi.p|Nanoce1779_2|529671 >mRNA_6064-protein ID=mRNA_6064-protein|Name=jgi.p|Nanoce1779_2|529671|organism=Nannochloropsis oceanica|type=polypeptide|length=584bp
MGLYDLLAVGIGGTVGSGVFVLAGEIANAPDLPAGPSVVLSFAAAGLGCV
LSGLSFAELASRIHADGSSYIYAYVNLGEVFAFVAGCCLTLEYGISSAAV
ARNWGDKLGAWVDHMHPHDASEGSVWHPGSGEATGFFRDFNIYAGAIELV
CMCIILRGMNVSKITVDVITIAKLLLVVFMTITGFSFLRPSNLEPFAPSG
FRGIFRGGTRCFFGYLGFDEVCCMGGEAKNPSKSIPLAVMGTISVVTVLY
ILASLALVGMQPFADITPSSGFAEAFRFNNLGWAANTVTAGELLTLPLVV
LVSLLAQPRLQYAMAQDGLLPAVFGHVDRNGNLFKGTLIAGTVGVVVALF
LPFRALEDVISAGVLIAFNLTNTALVVSRRVHPIRPSANRTLALAFNVLA
LSACFMWKNLGTILPWLPLNVLVTAAAVVPLVLLHVTCPDHPSQDGHFTT
PLVPWVPALGSAFNWFLLTQLSWEGLGLVLAFLGGSLFLYATYGWRNSKG
GKTGWMEVLAASVRRHSRHPSEVDPGLIEGLLGEGEGEGGEEHLRGGRRG
GKEKEGDGGQEGQRQAVQEVQPDLRKAGDMIST* back to topmRNA from alignment at scaffold_14:439967..441983- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6064 ID=mRNA_6064|Name=jgi.p|Nanoce1779_2|529671|organism=Nannochloropsis oceanica|type=mRNA|length=2017bp|location=Sequence derived from alignment at scaffold_14:439967..441983- (Nannochloropsis oceanica)
ATGGGGCTGTACGATTTGCTCGCAGTCGGCATCGGTGGCACAGTTGGAAG
CGGGGTATTTGTCCTAGCAGGGGAGATTGCCAATGCGCCTGACTTGCCTG
CAGGACCTTCGGTTGTTCTTTCTTTTGCGGCTGCGGGCTTGGGGTGTGTC
CTGAGTGGCCTCTCATTTGCCGAGTTGGCGAGTCGCATTCATGCGGACGG
GAGCTCCTACATTTATGCATACGTGAACTTGGGGGAGGTCTTTGCGTTTG
TGGCTGGCTGGTAAGGCGGGAGAATGGAGAAGGCAGCATCATTACATGTA
AATGGGGCACCGTATGTGTCGTCAATCTTGCTTCTCTACCCACTTCTTGC
CCGCCCATCACACATATGTACTCATATACACATACACACACATGAATACA
CACACATACACATACATGCATGTATACTCTCTCTCTCACACACACAGAGA
CATGTGTATATATATACATATATATACACATATATACACATATACCTGTT
CCCATAAACATACATATGACCACAGTTGTCTGACCCTAGAATATGGCATC
AGCAGTGCTGCCGTGGCGAGAAACTGGGGCGACAAGCTCGGAGCTTGGGT
AGATCACATGCATCCACACGACGCCAGCGAGGGTTCTGTCTGGCACCCGG
GCAGTGGGGAGGCAACGGGTTTCTTCCGCGATTTCAATATCTACGCGGGG
GCGATTGAGCTGGTGTGTATGTGCATTATTCTTCGAGGGATGAATGTGAG
TAAAATCACTGTGGATGTCATAACAATAGCGAAGTTGTTGCTGGTTGTGT
TCATGACCATCACCGGCTTTTCGTTTTTAAGGCCGAGTAATCTTGAGCCG
TTTGCACCCAGTGGGTTTCGAGGCATTTTCAGAGGAGGGACAAGGTGTTT
TTTCGGATATCTGGGCTTTGACGAGGTGTGCTGCATGGGCGGAGAAGCGA
AGAATCCGTCAAAAAGCATACCGTTGGCGGTGATGGGAACCATCTCGGTG
GTGACAGTGCTGTACATCTTGGCGTCGTTGGCCTTGGTGGGGATGCAGCC
TTTTGCGGATATTACTCCTTCTTCCGGGTTTGCCGAGGCGTTTCGGTTCA
ATAACCTGGGTTGGGCCGCGAATACCGTGACGGCTGGAGAGCTACTGACG
CTACCACTAGTGGTATTGGTCTCGCTGCTCGCCCAACCCCGCCTTCAATA
TGCTATGGCCCAAGATGGATTACTCCCCGCTGTCTTCGGTCACGTGGACC
GGAACGGAAATCTCTTCAAAGGCACGTTGATCGCGGGAACGGTGGGTGTG
GTCGTAGCATTATTTTTGCCATTTCGTGCATTGGAGGACGTGATCAGCGC
CGGGGTGCTCATTGCCTTTAACCTCACCAACACTGCCCTGGTTGTCTCCC
GTCGAGTCCATCCGATCCGGCCTTCCGCCAATCGTACCTTAGCTCTAGCA
TTCAACGTCCTCGCATTAAGTGCATGTTTCATGTGGAAAAACCTCGGGAC
CATTCTCCCCTGGCTACCGCTTAATGTACTGGTGACCGCCGCGGCAGTGG
TACCTCTTGTGTTGCTGCATGTGACTTGCCCAGATCATCCTTCGCAGGAC
GGACATTTTACTACCCCGCTTGTACCGTGGGTGCCGGCTTTAGGGAGTGC
TTTCAACTGGTTTTTGTTGACACAGTTGTCGTGGGAGGGGTTGGGTTTAG
TCTTGGCCTTCCTGGGAGGGTCTCTTTTTTTGTATGCAACTTATGGATGG
AGGAACTCGAAGGGGGGAAAGACGGGGTGGATGGAGGTGTTGGCGGCCTC
GGTACGCAGGCATTCGCGGCATCCAAGTGAGGTGGATCCCGGGTTAATAG
AGGGGTTGTTGGGGGAGGGGGAGGGGGAGGGAGGCGAGGAGCATTTACGT
GGGGGTCGAAGGGGTGGTAAGGAGAAAGAGGGAGATGGGGGGCAGGAGGG
ACAGAGGCAAGCCGTACAAGAGGTGCAACCTGATCTGCGGAAAGCGGGCG
ATATGATTTCTACTTGA back to topCoding sequence (CDS) from alignment at scaffold_14:439967..441983- >mRNA_6064 ID=mRNA_6064|Name=jgi.p|Nanoce1779_2|529671|organism=Nannochloropsis oceanica|type=CDS|length=3504bp|location=Sequence derived from alignment at scaffold_14:439967..441983- (Nannochloropsis oceanica)
TTGTCTGACCCTAGAATATGGCATCAGCAGTGCTGCCGTGGCGAGAAACT
GGGGCGACAAGCTCGGAGCTTGGGTAGATCACATGCATCCACACGACGCC
AGCGAGGGTTCTGTCTGGCACCCGGGCAGTGGGGAGGCAACGGGTTTCTT
CCGCGATTTCAATATCTACGCGGGGGCGATTGAGCTGGTGTGTATGTGCA
TTATTCTTCGAGGGATGAATGTGAGTAAAATCACTGTGGATGTCATAACA
ATAGCGAAGTTGTTGCTGGTTGTGTTCATGACCATCACCGGCTTTTCGTT
TTTAAGGCCGAGTAATCTTGAGCCGTTTGCACCCAGTGGGTTTCGAGGCA
TTTTCAGAGGAGGGACAAGGTGTTTTTTCGGATATCTGGGCTTTGACGAG
GTGTGCTGCATGGGCGGAGAAGCGAAGAATCCGTCAAAAAGCATACCGTT
GGCGGTGATGGGAACCATCTCGGTGGTGACAGTGCTGTACATCTTGGCGT
CGTTGGCCTTGGTGGGGATGCAGCCTTTTGCGGATATTACTCCTTCTTCC
GGGTTTGCCGAGGCGTTTCGGTTCAATAACCTGGGTTGGGCCGCGAATAC
CGTGACGGCTGGAGAGCTACTGACGCTACCACTAGTGGTATTGGTCTCGC
TGCTCGCCCAACCCCGCCTTCAATATGCTATGGCCCAAGATGGATTACTC
CCCGCTGTCTTCGGTCACGTGGACCGGAACGGAAATCTCTTCAAAGGCAC
GTTGATCGCGGGAACGGTGGGTGTGGTCGTAGCATTATTTTTGCCATTTC
GTGCATTGGAGGACGTGATCAGCGCCGGGGTGCTCATTGCCTTTAACCTC
ACCAACACTGCCCTGGTTGTCTCCCGTCGAGTCCATCCGATCCGGCCTTC
CGCCAATCGTACCTTAGCTCTAGCATTCAACGTCCTCGCATTAAGTGCAT
GTTTCATGTGGAAAAACCTCGGGACCATTCTCCCCTGGCTACCGCTTAAT
GTACTGGTGACCGCCGCGGCAGTGGTACCTCTTGTGTTGCTGCATGTGAC
TTGCCCAGATCATCCTTCGCAGGACGGACATTTTACTACCCCGCTTGTAC
CGTGGGTGCCGGCTTTAGGGAGTGCTTTCAACTGGTTTTTGTTGACACAG
TTGTCGTGGGAGGGGTTGGGTTTAGTCTTGGCCTTCCTGGGAGGGTCTCT
TTTTTTGTATGCAACTTATGGATGGAGGAACTCGAAGGGGGGAAAGACGG
GGTGGATGGAGGTGTTGGCGGCCTCGGTACGCAGGCATTCGCGGCATCCA
AGTGAGGTGGATCCCGGGTTAATAGAGGGGTTGTTGGGGGAGGGGGAGGG
GGAGGGAGGCGAGGAGCATTTACGTGGGGGTCGAAGGGGTGGTAAGGAGA
AAGAGGGAGATGGGGGGCAGGAGGGACAGAGGCAAGCCGTACAAGAGGTG
CAACCTGATCTGCGGAAAGCGGGCGATATGATTTCTACTTGAATGGGGCT
GTACGATTTGCTCGCAGTCGGCATCGGTGGCACAGTTGGAAGCGGGGTAT
TTGTCCTAGCAGGGGAGATTGCCAATGCGCCTGACTTGCCTGCAGGACCT
TCGGTTGTTCTTTCTTTTGCGGCTGCGGGCTTGGGGTGTGTCCTGAGTGG
CCTCTCATTTGCCGAGTTGGCGAGTCGCATTCATGCGGACGGGAGCTCCT
ACATTTATGCATACGTGAACTTGGGGGAGGTCTTTGCGTTTGTGGCTGGC
TGTTGTCTGACCCTAGAATATGGCATCAGCAGTGCTGCCGTGGCGAGAAA
CTGGGGCGACAAGCTCGGAGCTTGGGTAGATCACATGCATCCACACGACG
CCAGCGAGGGTTCTGTCTGGCACCCGGGCAGTGGGGAGGCAACGGGTTTC
TTCCGCGATTTCAATATCTACGCGGGGGCGATTGAGCTGGTGTGTATGTG
CATTATTCTTCGAGGGATGAATGTGAGTAAAATCACTGTGGATGTCATAA
CAATAGCGAAGTTGTTGCTGGTTGTGTTCATGACCATCACCGGCTTTTCG
TTTTTAAGGCCGAGTAATCTTGAGCCGTTTGCACCCAGTGGGTTTCGAGG
CATTTTCAGAGGAGGGACAAGGTGTTTTTTCGGATATCTGGGCTTTGACG
AGGTGTGCTGCATGGGCGGAGAAGCGAAGAATCCGTCAAAAAGCATACCG
TTGGCGGTGATGGGAACCATCTCGGTGGTGACAGTGCTGTACATCTTGGC
GTCGTTGGCCTTGGTGGGGATGCAGCCTTTTGCGGATATTACTCCTTCTT
CCGGGTTTGCCGAGGCGTTTCGGTTCAATAACCTGGGTTGGGCCGCGAAT
ACCGTGACGGCTGGAGAGCTACTGACGCTACCACTAGTGGTATTGGTCTC
GCTGCTCGCCCAACCCCGCCTTCAATATGCTATGGCCCAAGATGGATTAC
TCCCCGCTGTCTTCGGTCACGTGGACCGGAACGGAAATCTCTTCAAAGGC
ACGTTGATCGCGGGAACGGTGGGTGTGGTCGTAGCATTATTTTTGCCATT
TCGTGCATTGGAGGACGTGATCAGCGCCGGGGTGCTCATTGCCTTTAACC
TCACCAACACTGCCCTGGTTGTCTCCCGTCGAGTCCATCCGATCCGGCCT
TCCGCCAATCGTACCTTAGCTCTAGCATTCAACGTCCTCGCATTAAGTGC
ATGTTTCATGTGGAAAAACCTCGGGACCATTCTCCCCTGGCTACCGCTTA
ATGTACTGGTGACCGCCGCGGCAGTGGTACCTCTTGTGTTGCTGCATGTG
ACTTGCCCAGATCATCCTTCGCAGGACGGACATTTTACTACCCCGCTTGT
ACCGTGGGTGCCGGCTTTAGGGAGTGCTTTCAACTGGTTTTTGTTGACAC
AGTTGTCGTGGGAGGGGTTGGGTTTAGTCTTGGCCTTCCTGGGAGGGTCT
CTTTTTTTGTATGCAACTTATGGATGGAGGAACTCGAAGGGGGGAAAGAC
GGGGTGGATGGAGGTGTTGGCGGCCTCGGTACGCAGGCATTCGCGGCATC
CAAGTGAGGTGGATCCCGGGTTAATAGAGGGGTTGTTGGGGGAGGGGGAG
GGGGAGGGAGGCGAGGAGCATTTACGTGGGGGTCGAAGGGGTGGTAAGGA
GAAAGAGGGAGATGGGGGGCAGGAGGGACAGAGGCAAGCCGTACAAGAGG
TGCAACCTGATCTGCGGAAAGCGGGCGATATGATTTCTACTTGAATGGGG
CTGTACGATTTGCTCGCAGTCGGCATCGGTGGCACAGTTGGAAGCGGGGT
ATTTGTCCTAGCAGGGGAGATTGCCAATGCGCCTGACTTGCCTGCAGGAC
CTTCGGTTGTTCTTTCTTTTGCGGCTGCGGGCTTGGGGTGTGTCCTGAGT
GGCCTCTCATTTGCCGAGTTGGCGAGTCGCATTCATGCGGACGGGAGCTC
CTACATTTATGCATACGTGAACTTGGGGGAGGTCTTTGCGTTTGTGGCTG
GCTG back to top
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