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Properties
| Property Name | Value |
|---|
| TranscriptId | 593875 |
| Track | FilteredModels2 |
| ProteinId | 593789 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:539892..541947 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_6111 ID=mRNA_6111|Name=jgi.p|Nanoce1779_2|593789|organism=Nannochloropsis oceanica|type=mRNA|length=1085bp
GGCACTACCGCCGCAGGAGGAGGCGGCACTACCGCCGCAGGAGGAGGCGG
GGGAGGGGTTGACAATATGGTGGAGGTAGACGCGATAATCGAGAAGCTTT
TGACAGTCCGCGGGGCGCGACCAGGAAAGGTGGTGCAATTGCTTGAGTCG
GAAATTCGCATGCTGTGTATCAAGGCGAAGGACGTGTTCATGCAACAGTC
GATGCTGTTGGAGTTGGAGGCGCCGATTAAAATTTGTGGGGACATTCATG
GGCAGTACTATGACTTATTGCGGCTGTTCGAGTACGGGGGCTTTCCACCT
AATGCCAACTATCTCTTCCTGGGTGATTACGTCGACCGGGGAAAGCAGTC
CCTAGAGACGATCTGCCTCCTCCTGGCCTACAAAATAAAATACCCGGAAA
ACTTCTTCATCCTTCGTGGCAACCACGAGTGTGCTTCTATTAACCGCATT
TATGGTTTCTATGACGAGTGCAAACGCCGCTACAACATCAAGCTCTGGAA
GACGTTCACAGACTGCTTCAACTGCCTCCCCATCGCCGCAGTCATCGACG
AGAAGATCTTCTGCATGCACGGCGGCCTCTCGCCGGACCTGAATTCACTA
GAGGAAATAAAGGAAATCATGCGCCCCACCGACGTGCCAGATACGGGGCT
CTTGTGCGACTTGCTGTGGGCGGACCCAGACAAGGACATCATGGGTTGGG
GCGAAAACGACAGAGGGGTGAGCTATACGTTTGGGGAGGATGTGGTGGCT
GGCTTTTTGAAGCAGCACGACTTGGACTTGATCTGTAGAGCGCATCAGGT
GGTAGAGGACGGCTATGAGTTCTTCGCACGGCGGCAATTGGTCACAATTT
TCTCAGCGCCCAACTATTGCGGCGAATTCGACAATGCGGGCGCAATGATG
AGCGTGGACGAGACATTGATGTGCTCGTTCCAGATCCTCAAGCCCGCAGA
AAAGAAACAGAGATACGCCTATGCGGGTTTAGGGGGGCAAGCGATGGGGG
GAGGAGTCATTGGAGGAGGGGGAGGAGGAAGGCCGGCGACGCCACCAAAG
GGGCCGGGGCTGCCTGGGAATGGAAAGAAGTAGAG back to topprotein sequence of jgi.p|Nanoce1779_2|593789 >mRNA_6111-protein ID=mRNA_6111-protein|Name=jgi.p|Nanoce1779_2|593789|organism=Nannochloropsis oceanica|type=polypeptide|length=339bp
MVEVDAIIEKLLTVRGARPGKVVQLLESEIRMLCIKAKDVFMQQSMLLEL
EAPIKICGDIHGQYYDLLRLFEYGGFPPNANYLFLGDYVDRGKQSLETIC
LLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTDC
FNCLPIAAVIDEKIFCMHGGLSPDLNSLEEIKEIMRPTDVPDTGLLCDLL
WADPDKDIMGWGENDRGVSYTFGEDVVAGFLKQHDLDLICRAHQVVEDGY
EFFARRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAEKKQRY
AYAGLGGQAMGGGVIGGGGGGRPATPPKGPGLPGNGKK* back to topmRNA from alignment at scaffold_14:539892..541947- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_6111 ID=mRNA_6111|Name=jgi.p|Nanoce1779_2|593789|organism=Nannochloropsis oceanica|type=mRNA|length=2056bp|location=Sequence derived from alignment at scaffold_14:539892..541947- (Nannochloropsis oceanica)
GGCACTACCGCCGCAGGAGGAGGCGGCACTACCGCCGCAGGAGGAGGCGG
GGGAGGGGTTGACAATATGGTGGAGGTAGACGCGATAATCGAGAAGCTTT
TGACAGTCCGCGGGGCGCGACCAGGAAAGGTGGTGCAATTGCTTGAGTCG
GAAATTCGCATGCTGTGTATCAAGGCGAAGGACGTGTTCATGCAACAGTC
GATGCTGTTGGAGTTGGAGGCGCCGATTAAAATTTGTGGGGACATTCATG
GGCAGTACTATGACTTATTGCGGCTGTTCGAGTACGGGGGCTTTCCACCT
AATGCCAACTATCTCTTCCTGGGGTAAGGAGGGGGGAGAGGGAAGAAGGG
AGGGGAGAGGGAGGGAGGAAGAAAGTAGGGAGGGAAGGACGAAAAAAGAT
GCATTTACTGCCACAAGTGCATGCTTCCGATAACCACTTGTGCGTAAAGA
TGAGCGCTTGGATTACTGTAAACTCATCTCCTTCCCTCCATCATTACCAC
AGTGATTACGTCGACCGGGGAAAGCAGTCCCTAGAGACGATCTGCCTCCT
CCTGGCCTACAAAATAAAATACCCGGAAAACTTCTTCATCCTTCGTGGCA
ACCACGAGTGTGCTTCTATTAACCGCATTTATGGTTTCTATGACGAGTGC
AAACGCCGCTACAACATCAAGCTCTGGAAGGTGCGTCGGTTGCTGCCCTT
CATCCTTCCTTTTCTTCCTCCTTCCCTCCCACCCCTATCTGCCCCCCTAA
CTGTCTTATAATTGTTCTTTATCTCCGCGTCATGACTCCCTTCACTCGTC
CGTCCCTCCTTCCTTCCCTCCTTCCCTCCTTCCCTCCCATTCTTAGACGT
TCACAGACTGCTTCAACTGCCTCCCCATCGCCGCAGTCATCGACGAGAAG
ATCTTCTGCATGCACGGCGGCCTCTCGCCGGACCTGAATTCACTAGAGGA
AATAAAGGAAATCATGCGCCCCACCGACGTGCCAGATACGGGGCTCTTGT
GCGACTTGCTGTGGGCGGACCCAGACAAGGACATCATGGGTTGGGGCGAA
AACGACAGAGGGGTAAGGGGGAATGAGAATAGGGAGGACGAGAGGGAGGA
GTGGCTTTTGGAGACATCAAGTAGCAGTTTCCGTAAAGTTGTACCATCCT
CCTTTTTTTACATGACACTATCCCGACTATTTTCTTTACCGGATAAGCCG
TAAGCACTTGGGAGTGAATGGTAGCGTTTGTCCGGCTTCCTTTCTGAAGC
AAGCATCATTTTCTCCGATGATAATGCTTTACCCTCACTCACATTCATTC
ATGATTCCGCTTTATTTTACTTGTTCTTGTAGGTGAGCTATACGTTTGGG
GAGGATGTGGTGGCTGGCTTTTTGAAGCAGCACGACTTGGACTTGATCTG
TAGAGCGCATCAGGTAGGCGCCGAGGGAGGGAGGGAGGGAGGAAGGAAGA
AGGGGATACGAGAACATCATGACATAGCCACTTGCCTTCATCCATTCATT
ACCCTTCCCTCCCTCCTTCCCTCTCTCCCTCCCTCCCTCCCGCCTTCCCT
CATGCAGGTGGTAGAGGACGGCTATGAGTTCTTCGCACGGCGGCAATTGG
TCACAATTTTCTCAGCGGTACGTCCTTCCCTCCCCGCCTCCCATCCTCCT
CCCCTTTCCTCTCTCTCCTCCCCGTCAGTGTCCACTCTTATTTTTCTTCC
CGCGATGACGGTCTATGAGAAGCCGCTGCGAGTGGGGAAAATTCCGGCGT
GGGAAGCGAGATGTTGACAAGGCTTCAGTCAAACCCACTCACCCCTCCCT
GATTCCCTTCCTCCCTCGCGCCGGCACAGCCCAACTATTGCGGCGAATTC
GACAATGCGGGCGCAATGATGAGCGTGGACGAGACATTGATGTGCTCGTT
CCAGATCCTCAAGCCCGCAGAAAAGAAACAGAGATACGCCTATGCGGGTT
TAGGGGGGCAAGCGATGGGGGGAGGAGTCATTGGAGGAGGGGGAGGAGGA
AGGCCGGCGACGCCACCAAAGGGGCCGGGGCTGCCTGGGAATGGAAAGAA
GTAGAG back to topCoding sequence (CDS) from alignment at scaffold_14:539892..541947- >mRNA_6111 ID=mRNA_6111|Name=jgi.p|Nanoce1779_2|593789|organism=Nannochloropsis oceanica|type=CDS|length=6102bp|location=Sequence derived from alignment at scaffold_14:539892..541947- (Nannochloropsis oceanica)
CCCAACTATTGCGGCGAATTCGACAATGCGGGCGCAATGATGAGCGTGGA
CGAGACATTGATGTGCTCGTTCCAGATCCTCAAGCCCGCAGAAAAGAAAC
AGAGATACGCCTATGCGGGTTTAGGGGGGCAAGCGATGGGGGGAGGAGTC
ATTGGAGGAGGGGGAGGAGGAAGGCCGGCGACGCCACCAAAGGGGCCGGG
GCTGCCTGGGAATGGAAAGAAGTAGGTGGTAGAGGACGGCTATGAGTTCT
TCGCACGGCGGCAATTGGTCACAATTTTCTCAGCGGTGAGCTATACGTTT
GGGGAGGATGTGGTGGCTGGCTTTTTGAAGCAGCACGACTTGGACTTGAT
CTGTAGAGCGCATCAGACGTTCACAGACTGCTTCAACTGCCTCCCCATCG
CCGCAGTCATCGACGAGAAGATCTTCTGCATGCACGGCGGCCTCTCGCCG
GACCTGAATTCACTAGAGGAAATAAAGGAAATCATGCGCCCCACCGACGT
GCCAGATACGGGGCTCTTGTGCGACTTGCTGTGGGCGGACCCAGACAAGG
ACATCATGGGTTGGGGCGAAAACGACAGAGGGTGATTACGTCGACCGGGG
AAAGCAGTCCCTAGAGACGATCTGCCTCCTCCTGGCCTACAAAATAAAAT
ACCCGGAAAACTTCTTCATCCTTCGTGGCAACCACGAGTGTGCTTCTATT
AACCGCATTTATGGTTTCTATGACGAGTGCAAACGCCGCTACAACATCAA
GCTCTGGAAGATGGTGGAGGTAGACGCGATAATCGAGAAGCTTTTGACAG
TCCGCGGGGCGCGACCAGGAAAGGTGGTGCAATTGCTTGAGTCGGAAATT
CGCATGCTGTGTATCAAGGCGAAGGACGTGTTCATGCAACAGTCGATGCT
GTTGGAGTTGGAGGCGCCGATTAAAATTTGTGGGGACATTCATGGGCAGT
ACTATGACTTATTGCGGCTGTTCGAGTACGGGGGCTTTCCACCTAATGCC
AACTATCTCTTCCTGGGCCCAACTATTGCGGCGAATTCGACAATGCGGGC
GCAATGATGAGCGTGGACGAGACATTGATGTGCTCGTTCCAGATCCTCAA
GCCCGCAGAAAAGAAACAGAGATACGCCTATGCGGGTTTAGGGGGGCAAG
CGATGGGGGGAGGAGTCATTGGAGGAGGGGGAGGAGGAAGGCCGGCGACG
CCACCAAAGGGGCCGGGGCTGCCTGGGAATGGAAAGAAGTAGGTGGTAGA
GGACGGCTATGAGTTCTTCGCACGGCGGCAATTGGTCACAATTTTCTCAG
CGGTGAGCTATACGTTTGGGGAGGATGTGGTGGCTGGCTTTTTGAAGCAG
CACGACTTGGACTTGATCTGTAGAGCGCATCAGACGTTCACAGACTGCTT
CAACTGCCTCCCCATCGCCGCAGTCATCGACGAGAAGATCTTCTGCATGC
ACGGCGGCCTCTCGCCGGACCTGAATTCACTAGAGGAAATAAAGGAAATC
ATGCGCCCCACCGACGTGCCAGATACGGGGCTCTTGTGCGACTTGCTGTG
GGCGGACCCAGACAAGGACATCATGGGTTGGGGCGAAAACGACAGAGGGT
GATTACGTCGACCGGGGAAAGCAGTCCCTAGAGACGATCTGCCTCCTCCT
GGCCTACAAAATAAAATACCCGGAAAACTTCTTCATCCTTCGTGGCAACC
ACGAGTGTGCTTCTATTAACCGCATTTATGGTTTCTATGACGAGTGCAAA
CGCCGCTACAACATCAAGCTCTGGAAGATGGTGGAGGTAGACGCGATAAT
CGAGAAGCTTTTGACAGTCCGCGGGGCGCGACCAGGAAAGGTGGTGCAAT
TGCTTGAGTCGGAAATTCGCATGCTGTGTATCAAGGCGAAGGACGTGTTC
ATGCAACAGTCGATGCTGTTGGAGTTGGAGGCGCCGATTAAAATTTGTGG
GGACATTCATGGGCAGTACTATGACTTATTGCGGCTGTTCGAGTACGGGG
GCTTTCCACCTAATGCCAACTATCTCTTCCTGGGCCCAACTATTGCGGCG
AATTCGACAATGCGGGCGCAATGATGAGCGTGGACGAGACATTGATGTGC
TCGTTCCAGATCCTCAAGCCCGCAGAAAAGAAACAGAGATACGCCTATGC
GGGTTTAGGGGGGCAAGCGATGGGGGGAGGAGTCATTGGAGGAGGGGGAG
GAGGAAGGCCGGCGACGCCACCAAAGGGGCCGGGGCTGCCTGGGAATGGA
AAGAAGTAGGTGGTAGAGGACGGCTATGAGTTCTTCGCACGGCGGCAATT
GGTCACAATTTTCTCAGCGGTGAGCTATACGTTTGGGGAGGATGTGGTGG
CTGGCTTTTTGAAGCAGCACGACTTGGACTTGATCTGTAGAGCGCATCAG
ACGTTCACAGACTGCTTCAACTGCCTCCCCATCGCCGCAGTCATCGACGA
GAAGATCTTCTGCATGCACGGCGGCCTCTCGCCGGACCTGAATTCACTAG
AGGAAATAAAGGAAATCATGCGCCCCACCGACGTGCCAGATACGGGGCTC
TTGTGCGACTTGCTGTGGGCGGACCCAGACAAGGACATCATGGGTTGGGG
CGAAAACGACAGAGGGTGATTACGTCGACCGGGGAAAGCAGTCCCTAGAG
ACGATCTGCCTCCTCCTGGCCTACAAAATAAAATACCCGGAAAACTTCTT
CATCCTTCGTGGCAACCACGAGTGTGCTTCTATTAACCGCATTTATGGTT
TCTATGACGAGTGCAAACGCCGCTACAACATCAAGCTCTGGAAGATGGTG
GAGGTAGACGCGATAATCGAGAAGCTTTTGACAGTCCGCGGGGCGCGACC
AGGAAAGGTGGTGCAATTGCTTGAGTCGGAAATTCGCATGCTGTGTATCA
AGGCGAAGGACGTGTTCATGCAACAGTCGATGCTGTTGGAGTTGGAGGCG
CCGATTAAAATTTGTGGGGACATTCATGGGCAGTACTATGACTTATTGCG
GCTGTTCGAGTACGGGGGCTTTCCACCTAATGCCAACTATCTCTTCCTGG
GCCCAACTATTGCGGCGAATTCGACAATGCGGGCGCAATGATGAGCGTGG
ACGAGACATTGATGTGCTCGTTCCAGATCCTCAAGCCCGCAGAAAAGAAA
CAGAGATACGCCTATGCGGGTTTAGGGGGGCAAGCGATGGGGGGAGGAGT
CATTGGAGGAGGGGGAGGAGGAAGGCCGGCGACGCCACCAAAGGGGCCGG
GGCTGCCTGGGAATGGAAAGAAGTAGGTGGTAGAGGACGGCTATGAGTTC
TTCGCACGGCGGCAATTGGTCACAATTTTCTCAGCGGTGAGCTATACGTT
TGGGGAGGATGTGGTGGCTGGCTTTTTGAAGCAGCACGACTTGGACTTGA
TCTGTAGAGCGCATCAGACGTTCACAGACTGCTTCAACTGCCTCCCCATC
GCCGCAGTCATCGACGAGAAGATCTTCTGCATGCACGGCGGCCTCTCGCC
GGACCTGAATTCACTAGAGGAAATAAAGGAAATCATGCGCCCCACCGACG
TGCCAGATACGGGGCTCTTGTGCGACTTGCTGTGGGCGGACCCAGACAAG
GACATCATGGGTTGGGGCGAAAACGACAGAGGGTGATTACGTCGACCGGG
GAAAGCAGTCCCTAGAGACGATCTGCCTCCTCCTGGCCTACAAAATAAAA
TACCCGGAAAACTTCTTCATCCTTCGTGGCAACCACGAGTGTGCTTCTAT
TAACCGCATTTATGGTTTCTATGACGAGTGCAAACGCCGCTACAACATCA
AGCTCTGGAAGATGGTGGAGGTAGACGCGATAATCGAGAAGCTTTTGACA
GTCCGCGGGGCGCGACCAGGAAAGGTGGTGCAATTGCTTGAGTCGGAAAT
TCGCATGCTGTGTATCAAGGCGAAGGACGTGTTCATGCAACAGTCGATGC
TGTTGGAGTTGGAGGCGCCGATTAAAATTTGTGGGGACATTCATGGGCAG
TACTATGACTTATTGCGGCTGTTCGAGTACGGGGGCTTTCCACCTAATGC
CAACTATCTCTTCCTGGGCCCAACTATTGCGGCGAATTCGACAATGCGGG
CGCAATGATGAGCGTGGACGAGACATTGATGTGCTCGTTCCAGATCCTCA
AGCCCGCAGAAAAGAAACAGAGATACGCCTATGCGGGTTTAGGGGGGCAA
GCGATGGGGGGAGGAGTCATTGGAGGAGGGGGAGGAGGAAGGCCGGCGAC
GCCACCAAAGGGGCCGGGGCTGCCTGGGAATGGAAAGAAGTAGGTGGTAG
AGGACGGCTATGAGTTCTTCGCACGGCGGCAATTGGTCACAATTTTCTCA
GCGGTGAGCTATACGTTTGGGGAGGATGTGGTGGCTGGCTTTTTGAAGCA
GCACGACTTGGACTTGATCTGTAGAGCGCATCAGACGTTCACAGACTGCT
TCAACTGCCTCCCCATCGCCGCAGTCATCGACGAGAAGATCTTCTGCATG
CACGGCGGCCTCTCGCCGGACCTGAATTCACTAGAGGAAATAAAGGAAAT
CATGCGCCCCACCGACGTGCCAGATACGGGGCTCTTGTGCGACTTGCTGT
GGGCGGACCCAGACAAGGACATCATGGGTTGGGGCGAAAACGACAGAGGG
TGATTACGTCGACCGGGGAAAGCAGTCCCTAGAGACGATCTGCCTCCTCC
TGGCCTACAAAATAAAATACCCGGAAAACTTCTTCATCCTTCGTGGCAAC
CACGAGTGTGCTTCTATTAACCGCATTTATGGTTTCTATGACGAGTGCAA
ACGCCGCTACAACATCAAGCTCTGGAAGATGGTGGAGGTAGACGCGATAA
TCGAGAAGCTTTTGACAGTCCGCGGGGCGCGACCAGGAAAGGTGGTGCAA
TTGCTTGAGTCGGAAATTCGCATGCTGTGTATCAAGGCGAAGGACGTGTT
CATGCAACAGTCGATGCTGTTGGAGTTGGAGGCGCCGATTAAAATTTGTG
GGGACATTCATGGGCAGTACTATGACTTATTGCGGCTGTTCGAGTACGGG
GGCTTTCCACCTAATGCCAACTATCTCTTCCTGGGCCCAACTATTGCGGC
GAATTCGACAATGCGGGCGCAATGATGAGCGTGGACGAGACATTGATGTG
CTCGTTCCAGATCCTCAAGCCCGCAGAAAAGAAACAGAGATACGCCTATG
CGGGTTTAGGGGGGCAAGCGATGGGGGGAGGAGTCATTGGAGGAGGGGGA
GGAGGAAGGCCGGCGACGCCACCAAAGGGGCCGGGGCTGCCTGGGAATGG
AAAGAAGTAGGTGGTAGAGGACGGCTATGAGTTCTTCGCACGGCGGCAAT
TGGTCACAATTTTCTCAGCGGTGAGCTATACGTTTGGGGAGGATGTGGTG
GCTGGCTTTTTGAAGCAGCACGACTTGGACTTGATCTGTAGAGCGCATCA
GACGTTCACAGACTGCTTCAACTGCCTCCCCATCGCCGCAGTCATCGACG
AGAAGATCTTCTGCATGCACGGCGGCCTCTCGCCGGACCTGAATTCACTA
GAGGAAATAAAGGAAATCATGCGCCCCACCGACGTGCCAGATACGGGGCT
CTTGTGCGACTTGCTGTGGGCGGACCCAGACAAGGACATCATGGGTTGGG
GCGAAAACGACAGAGGGTGATTACGTCGACCGGGGAAAGCAGTCCCTAGA
GACGATCTGCCTCCTCCTGGCCTACAAAATAAAATACCCGGAAAACTTCT
TCATCCTTCGTGGCAACCACGAGTGTGCTTCTATTAACCGCATTTATGGT
TTCTATGACGAGTGCAAACGCCGCTACAACATCAAGCTCTGGAAGATGGT
GGAGGTAGACGCGATAATCGAGAAGCTTTTGACAGTCCGCGGGGCGCGAC
CAGGAAAGGTGGTGCAATTGCTTGAGTCGGAAATTCGCATGCTGTGTATC
AAGGCGAAGGACGTGTTCATGCAACAGTCGATGCTGTTGGAGTTGGAGGC
GCCGATTAAAATTTGTGGGGACATTCATGGGCAGTACTATGACTTATTGC
GGCTGTTCGAGTACGGGGGCTTTCCACCTAATGCCAACTATCTCTTCCTG
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