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Properties
Property Name | Value |
TranscriptId | 599916 |
Track | FilteredModels2 |
ProteinId | 599830 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_21 | supercontig | scaffold_21:192207..196299 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7731 ID=mRNA_7731|Name=jgi.p|Nanoce1779_2|599830|organism=Nannochloropsis oceanica|type=mRNA|length=4093bp AATAACAGCAGGAAGGAGGAGAAAAACGACGAGGAGAATCCGCACCGGCG AGCTGGGAGGGCGGCTTGGGAATCACGGCACAACGAGCACGCGAGCTCCC CGCCGGTGGAAGCAAGTACAAAAACCCAGCTCCTGTGACGGGCCGAGTCA GGACAAGGGCTATTTACCAGAACGCAACAGCAAATTTGGGGGAGTCAAAC GCAGTATAAGGGTCAAAGGCCCGACGTTCCCGTCAAGGAAACTTCGAAGC GGAGGAGAGAGCTTAACAGGAGGGCATCGGTGCTGGCGGGACAAGGACAA AATCCAAAAGACGACACCAGTAGCAATGATACATGACCCCATTCCCTACT TTCAGGGTTTTCACGACAGTGGATGGTGGCAGAGTCGCAGGTATGGTCCA GGAGGGAAAAAAGGCTGGCTCGTATGCTTCCTGAAGCTCTCCGCAATTGG CATAGTCCTTTCCTTTGTCTTGGGGCAATGCGGCGTGGTCTTACGCAACC CAGCACCCATTTGCGCTTGGCGGCTGTCGAAAAGCTGGAGCGTGGCCTGG GCTGACACCCAAGCGTCCCACCATCTGATGGTCTTGTATCTGAATGAGGG GGAGGAGTTTAAGTTGGAGAGCGAATCCTTGCCTTACGCCCGTTTTTTCA GCTTCCAGACCTATTCCTTTTTGGGGGACACATCGCATGGAATTATTCGA GATGTAGACATTGTGTCCCGTAATGGCCCAAACGTGTACAATAACATTAC TGCCGCGATGCGTGGAGAGAAGCAAGGCGGCTACACCCTCCACTTGACTG CCGACGGATTTGTCGGGGAGTACCCGAACGAATTGCGGGCTCTAGCGCAC GGCCGACGCAGCGGGTTCTTTGTCCTCGTCTTTCGTATGTACGACGTCGG CGATGTGCCTCATCCGCGAGCACCCTGGGCTCAATTGCTACGTGGGAGTG TCAGGAGACCAGAGAGGTGGGGATGGACTTCCCCTCCTCGCTTACTGGTA AGGCGCATACGGCGACAAGGTCCAAGCCCATGGCGTGAGATTCCCCTCTG CACAGAGCGTGAAAATGAAAGTAAGAAGGGCTTCATTGAGAACTTGATTT TCAATATCTTGTTCCGCCTCGAAAGCTTTCTTCCCTCCATACACTCCTAC ACGGGGTTCATCCGGCCACTCCGTAAGAACAACTTCCACCTACAGCTTGG AAGCTTGTTCGACACTCCGGACACCCGAACCCTGGTCTCAGCCGCCGCCA ACATTCCTGCGGTCGCTGAGCAGGGCGACCTCTGGGCGCGTGTCTCTACA AAGCTACCACGTACACCTCGCTCCCTCTATGCAGCGCCATTTGTGGCCAA CACCAGCGCCTATGATGTCCGTTATGTTTCCTTCACCAGTGCCTCTCGCG CCTTTCCACTACGGACTTTCGAGACATTGACCGACAAAGACATCCGACAA CACCATCAAGATCAGCTACAAGGATCCCGTGAGAAGTGGGACGGTCGTTT TGTCTTGTGGGTTGGCCCTGCGCGAGCACCCATTCCGGAGCAGGCTCGCG GGGAAAAGACCCTCATCATGACTTGGGGAACAGGCGCTGATCATGCCCTC CTTTACAACCAGCTCAACTCCATGTCTCACACGATGCTTGACAGGGCGCA GTCTCATTCGGCGTTGGCAAATGTTGTGGTCGAGGAATGCTTCCCTTTTA AGGAGCGTGACGATGATGGTGAGGAGGAGAAGGATAAGGATGAGGATGAA GACGAGATCCGCAACAACAACGTGGTCTCTCAATCTACGTCACGGGAGAC GGTGTGCTGTCTGAGCAAAGCGGAAAGGATGCCCACTTTCTGTCGGATGC CTGAGTTCCTGCATTTAAACCTGCGTGAATTCTTTCCGGCAATTGACTAC TTTGTTCACCAGCAAGAAGAAGGACAAGAACAGCCTTCTGTCTTGCGGAA AATTTCTTTCTAAAAATGTTTGTATAAATTACTCAGAAAATACCAAAATA CGGAGTAAATTCATGACGAAAGGAGTCTAGGTAGGCAATTGAAACACTAT ATACAATAACTTACATACGTACTTTGATCTGGCAGATACAAGAGAGGATT CTTCAAATACATGGTTTTTTTTTCCGGCTTTGACTATCCCAAATGTAAAA TTTAATTCATCAAATAGCAAAAAATTGTCGCATGTGTAAGGAAGGCTTTT ATAATGAAGCCAAATCGAAGCTATATTCATCATTTTTATTTAAGGAGAGG CGGATTTATTGAAAGAAACGTAAAAAAAAACAATTGTTGCTGCTTGCATC AAAGAGACAGGAATATTTTCCTCGGTCTAATGGTGACAGGTGCTGGTAGA GGTAGGATAGAGGAGGGGATAATTTGATTTACAAAAATTCAAGTACGATT TGTCGGGCTTATTGTGACCTAAACAACTTGACCAGAGTAAGGGAAGGAAA CAGGGAGTAAAGGAGGGGGAGACAATTGGAGGAAAGTGATAGAGCGCGCA TCCGATTATGTGTTGTTGGAGCCGCATTTGATTCAATTGACCTTGAAAGG AGGGCCATTGAATTCCCAGTTTCCGCAATGGCAATGGTCATAACATTTGT AGGTATATTGTCAGCACCATTTTCTTCTACTTGGTACACTTAACTATGAC ACACCGATAGCATACGGGTCCATGGATACCAATATCGAAAAGAGGAATGT TGTGCCGCCTCGCGTAACTAATGTTTTCACTCGCCAATGAATGAAATGGA GAAATCAAGGGAGACTTTAAAGTCGTTAAAGACTCATTAAAAGAAACTAA TTGGCATGCATAGAATCGGAGTGAAGACCAGGAAAAAACTAACGGTAGGA AAATATACAAGAAAGAAACACGAGTTGTGCATTCATGGGGGGAAAATCAA AAGGAAAAGATTCGACTTCAGATATTTAAACGTGAAAAATGGGATAGTAG TAATAAATAGCAGTTAGGAAAAATATTTTCCCATTGAGTTCTTTCAGCTA GGTTGTGCTTAGTTGTAGAATGATTTAGAATTTTGTTTATTCCAGCGCTT CGTGAGTCAGGAGAAAGCAAGATATGATACACACAGATAAATTTAATTTT GCTTGATCATTTGTCATACTAGCTGCTTTAACCCCAACCCAACCCCCTCA CCCAAAATTGACTTGTTTCTTGGCTGTGCATCCTAACTCATGGCACATCA AATAAAAACATACGCACGTTCTTTTCTTACTCATTAAGTCTCAGTCTACA CGACTAGTAATATTCCATTTTTGTGCTTGCTACCGTGCGTTTGTGAATTG TCTCGATAATTTTTTTGACTCCCACATTTAGGCTAAATTTTCTTATTTCA TGCTCTCCCGTCATGCAGCGGTCCAAACCTTCTGCTTCTTGAGTGGATGC CAAAGATCGTGTTCCTTCCTCAGTATGATTTTAGGTATGTACACATAACC TCTGATCGAAATAATGAATCCAGGAACCAAGGATACGACTGGAATGAAAT GGTAGAGTGCGCTGTCACCAATATCGTCAAAGTAAGTGAGAAAGTAAGGA AGGTATGTTAGCCATCAACTGCACTCCAATTTGCGCCTTTGGCTCCATTA TCGTATCGATATGTGTCATCATCCCAAGAGCCTTGTTGTCCCGCGCGCTC CTCCTCCTGCCGTTGCCGCATCTGTCTCACCTCTTCAAGAACTTTCTCTC CCACCAAGTTCCCTCCCGAAATCTCATGCAGCCTTTTCAACAATCGTCCT CTCGCCTGCTGTACATACGCATTCATCTCATAATCTGCACCCGCAACACC CTCCTTTTTATCCAAGCGCAAACCTGTCTCAATTTCTGCTACCAGCCATT CCCCCCTTTGACCTTCCACCTCTGTACCTGCCGAACCCAACAGGGCATCA GTCGGCAGCGCCTGCAGCGCATGAAGAGCGGCCAATCGTACCGCCAAGTC CTCATCGTGAACCCGTTTAAACACTTCGTGCACCACCCGCGGACGATGAT GAAGCAACGGCAAGCGTTCCTCCCTCTCAACCTCCCTCTCCACCTCCTCC CCCTGCGTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT back to topprotein sequence of jgi.p|Nanoce1779_2|599830 >mRNA_7731-protein ID=mRNA_7731-protein|Name=jgi.p|Nanoce1779_2|599830|organism=Nannochloropsis oceanica|type=polypeptide|length=546bp MIHDPIPYFQGFHDSGWWQSRRYGPGGKKGWLVCFLKLSAIGIVLSFVLG QCGVVLRNPAPICAWRLSKSWSVAWADTQASHHLMVLYLNEGEEFKLESE SLPYARFFSFQTYSFLGDTSHGIIRDVDIVSRNGPNVYNNITAAMRGEKQ GGYTLHLTADGFVGEYPNELRALAHGRRSGFFVLVFRMYDVGDVPHPRAP WAQLLRGSVRRPERWGWTSPPRLLVRRIRRQGPSPWREIPLCTERENESK KGFIENLIFNILFRLESFLPSIHSYTGFIRPLRKNNFHLQLGSLFDTPDT RTLVSAAANIPAVAEQGDLWARVSTKLPRTPRSLYAAPFVANTSAYDVRY VSFTSASRAFPLRTFETLTDKDIRQHHQDQLQGSREKWDGRFVLWVGPAR APIPEQARGEKTLIMTWGTGADHALLYNQLNSMSHTMLDRAQSHSALANV VVEECFPFKERDDDGEEEKDKDEDEDEIRNNNVVSQSTSRETVCCLSKAE RMPTFCRMPEFLHLNLREFFPAIDYFVHQQEEGQEQPSVLRKISF* back to topmRNA from alignment at scaffold_21:192207..196299- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7731 ID=mRNA_7731|Name=jgi.p|Nanoce1779_2|599830|organism=Nannochloropsis oceanica|type=mRNA|length=4093bp|location=Sequence derived from alignment at scaffold_21:192207..196299- (Nannochloropsis oceanica) AATAACAGCAGGAAGGAGGAGAAAAACGACGAGGAGAATCCGCACCGGCG
AGCTGGGAGGGCGGCTTGGGAATCACGGCACAACGAGCACGCGAGCTCCC
CGCCGGTGGAAGCAAGTACAAAAACCCAGCTCCTGTGACGGGCCGAGTCA
GGACAAGGGCTATTTACCAGAACGCAACAGCAAATTTGGGGGAGTCAAAC
GCAGTATAAGGGTCAAAGGCCCGACGTTCCCGTCAAGGAAACTTCGAAGC
GGAGGAGAGAGCTTAACAGGAGGGCATCGGTGCTGGCGGGACAAGGACAA
AATCCAAAAGACGACACCAGTAGCAATGATACATGACCCCATTCCCTACT
TTCAGGGTTTTCACGACAGTGGATGGTGGCAGAGTCGCAGGTATGGTCCA
GGAGGGAAAAAAGGCTGGCTCGTATGCTTCCTGAAGCTCTCCGCAATTGG
CATAGTCCTTTCCTTTGTCTTGGGGCAATGCGGCGTGGTCTTACGCAACC
CAGCACCCATTTGCGCTTGGCGGCTGTCGAAAAGCTGGAGCGTGGCCTGG
GCTGACACCCAAGCGTCCCACCATCTGATGGTCTTGTATCTGAATGAGGG
GGAGGAGTTTAAGTTGGAGAGCGAATCCTTGCCTTACGCCCGTTTTTTCA
GCTTCCAGACCTATTCCTTTTTGGGGGACACATCGCATGGAATTATTCGA
GATGTAGACATTGTGTCCCGTAATGGCCCAAACGTGTACAATAACATTAC
TGCCGCGATGCGTGGAGAGAAGCAAGGCGGCTACACCCTCCACTTGACTG
CCGACGGATTTGTCGGGGAGTACCCGAACGAATTGCGGGCTCTAGCGCAC
GGCCGACGCAGCGGGTTCTTTGTCCTCGTCTTTCGTATGTACGACGTCGG
CGATGTGCCTCATCCGCGAGCACCCTGGGCTCAATTGCTACGTGGGAGTG
TCAGGAGACCAGAGAGGTGGGGATGGACTTCCCCTCCTCGCTTACTGGTA
AGGCGCATACGGCGACAAGGTCCAAGCCCATGGCGTGAGATTCCCCTCTG
CACAGAGCGTGAAAATGAAAGTAAGAAGGGCTTCATTGAGAACTTGATTT
TCAATATCTTGTTCCGCCTCGAAAGCTTTCTTCCCTCCATACACTCCTAC
ACGGGGTTCATCCGGCCACTCCGTAAGAACAACTTCCACCTACAGCTTGG
AAGCTTGTTCGACACTCCGGACACCCGAACCCTGGTCTCAGCCGCCGCCA
ACATTCCTGCGGTCGCTGAGCAGGGCGACCTCTGGGCGCGTGTCTCTACA
AAGCTACCACGTACACCTCGCTCCCTCTATGCAGCGCCATTTGTGGCCAA
CACCAGCGCCTATGATGTCCGTTATGTTTCCTTCACCAGTGCCTCTCGCG
CCTTTCCACTACGGACTTTCGAGACATTGACCGACAAAGACATCCGACAA
CACCATCAAGATCAGCTACAAGGATCCCGTGAGAAGTGGGACGGTCGTTT
TGTCTTGTGGGTTGGCCCTGCGCGAGCACCCATTCCGGAGCAGGCTCGCG
GGGAAAAGACCCTCATCATGACTTGGGGAACAGGCGCTGATCATGCCCTC
CTTTACAACCAGCTCAACTCCATGTCTCACACGATGCTTGACAGGGCGCA
GTCTCATTCGGCGTTGGCAAATGTTGTGGTCGAGGAATGCTTCCCTTTTA
AGGAGCGTGACGATGATGGTGAGGAGGAGAAGGATAAGGATGAGGATGAA
GACGAGATCCGCAACAACAACGTGGTCTCTCAATCTACGTCACGGGAGAC
GGTGTGCTGTCTGAGCAAAGCGGAAAGGATGCCCACTTTCTGTCGGATGC
CTGAGTTCCTGCATTTAAACCTGCGTGAATTCTTTCCGGCAATTGACTAC
TTTGTTCACCAGCAAGAAGAAGGACAAGAACAGCCTTCTGTCTTGCGGAA
AATTTCTTTCTAAAAATGTTTGTATAAATTACTCAGAAAATACCAAAATA
CGGAGTAAATTCATGACGAAAGGAGTCTAGGTAGGCAATTGAAACACTAT
ATACAATAACTTACATACGTACTTTGATCTGGCAGATACAAGAGAGGATT
CTTCAAATACATGGTTTTTTTTTCCGGCTTTGACTATCCCAAATGTAAAA
TTTAATTCATCAAATAGCAAAAAATTGTCGCATGTGTAAGGAAGGCTTTT
ATAATGAAGCCAAATCGAAGCTATATTCATCATTTTTATTTAAGGAGAGG
CGGATTTATTGAAAGAAACGTAAAAAAAAACAATTGTTGCTGCTTGCATC
AAAGAGACAGGAATATTTTCCTCGGTCTAATGGTGACAGGTGCTGGTAGA
GGTAGGATAGAGGAGGGGATAATTTGATTTACAAAAATTCAAGTACGATT
TGTCGGGCTTATTGTGACCTAAACAACTTGACCAGAGTAAGGGAAGGAAA
CAGGGAGTAAAGGAGGGGGAGACAATTGGAGGAAAGTGATAGAGCGCGCA
TCCGATTATGTGTTGTTGGAGCCGCATTTGATTCAATTGACCTTGAAAGG
AGGGCCATTGAATTCCCAGTTTCCGCAATGGCAATGGTCATAACATTTGT
AGGTATATTGTCAGCACCATTTTCTTCTACTTGGTACACTTAACTATGAC
ACACCGATAGCATACGGGTCCATGGATACCAATATCGAAAAGAGGAATGT
TGTGCCGCCTCGCGTAACTAATGTTTTCACTCGCCAATGAATGAAATGGA
GAAATCAAGGGAGACTTTAAAGTCGTTAAAGACTCATTAAAAGAAACTAA
TTGGCATGCATAGAATCGGAGTGAAGACCAGGAAAAAACTAACGGTAGGA
AAATATACAAGAAAGAAACACGAGTTGTGCATTCATGGGGGGAAAATCAA
AAGGAAAAGATTCGACTTCAGATATTTAAACGTGAAAAATGGGATAGTAG
TAATAAATAGCAGTTAGGAAAAATATTTTCCCATTGAGTTCTTTCAGCTA
GGTTGTGCTTAGTTGTAGAATGATTTAGAATTTTGTTTATTCCAGCGCTT
CGTGAGTCAGGAGAAAGCAAGATATGATACACACAGATAAATTTAATTTT
GCTTGATCATTTGTCATACTAGCTGCTTTAACCCCAACCCAACCCCCTCA
CCCAAAATTGACTTGTTTCTTGGCTGTGCATCCTAACTCATGGCACATCA
AATAAAAACATACGCACGTTCTTTTCTTACTCATTAAGTCTCAGTCTACA
CGACTAGTAATATTCCATTTTTGTGCTTGCTACCGTGCGTTTGTGAATTG
TCTCGATAATTTTTTTGACTCCCACATTTAGGCTAAATTTTCTTATTTCA
TGCTCTCCCGTCATGCAGCGGTCCAAACCTTCTGCTTCTTGAGTGGATGC
CAAAGATCGTGTTCCTTCCTCAGTATGATTTTAGGTATGTACACATAACC
TCTGATCGAAATAATGAATCCAGGAACCAAGGATACGACTGGAATGAAAT
GGTAGAGTGCGCTGTCACCAATATCGTCAAAGTAAGTGAGAAAGTAAGGA
AGGTATGTTAGCCATCAACTGCACTCCAATTTGCGCCTTTGGCTCCATTA
TCGTATCGATATGTGTCATCATCCCAAGAGCCTTGTTGTCCCGCGCGCTC
CTCCTCCTGCCGTTGCCGCATCTGTCTCACCTCTTCAAGAACTTTCTCTC
CCACCAAGTTCCCTCCCGAAATCTCATGCAGCCTTTTCAACAATCGTCCT
CTCGCCTGCTGTACATACGCATTCATCTCATAATCTGCACCCGCAACACC
CTCCTTTTTATCCAAGCGCAAACCTGTCTCAATTTCTGCTACCAGCCATT
CCCCCCTTTGACCTTCCACCTCTGTACCTGCCGAACCCAACAGGGCATCA
GTCGGCAGCGCCTGCAGCGCATGAAGAGCGGCCAATCGTACCGCCAAGTC
CTCATCGTGAACCCGTTTAAACACTTCGTGCACCACCCGCGGACGATGAT
GAAGCAACGGCAAGCGTTCCTCCCTCTCAACCTCCCTCTCCACCTCCTCC
CCCTGCGTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT back to topCoding sequence (CDS) from alignment at scaffold_21:192207..196299- >mRNA_7731 ID=mRNA_7731|Name=jgi.p|Nanoce1779_2|599830|organism=Nannochloropsis oceanica|type=CDS|length=1638bp|location=Sequence derived from alignment at scaffold_21:192207..196299- (Nannochloropsis oceanica) ATGATACATGACCCCATTCCCTACTTTCAGGGTTTTCACGACAGTGGATG GTGGCAGAGTCGCAGGTATGGTCCAGGAGGGAAAAAAGGCTGGCTCGTAT GCTTCCTGAAGCTCTCCGCAATTGGCATAGTCCTTTCCTTTGTCTTGGGG CAATGCGGCGTGGTCTTACGCAACCCAGCACCCATTTGCGCTTGGCGGCT GTCGAAAAGCTGGAGCGTGGCCTGGGCTGACACCCAAGCGTCCCACCATC TGATGGTCTTGTATCTGAATGAGGGGGAGGAGTTTAAGTTGGAGAGCGAA TCCTTGCCTTACGCCCGTTTTTTCAGCTTCCAGACCTATTCCTTTTTGGG GGACACATCGCATGGAATTATTCGAGATGTAGACATTGTGTCCCGTAATG GCCCAAACGTGTACAATAACATTACTGCCGCGATGCGTGGAGAGAAGCAA GGCGGCTACACCCTCCACTTGACTGCCGACGGATTTGTCGGGGAGTACCC GAACGAATTGCGGGCTCTAGCGCACGGCCGACGCAGCGGGTTCTTTGTCC TCGTCTTTCGTATGTACGACGTCGGCGATGTGCCTCATCCGCGAGCACCC TGGGCTCAATTGCTACGTGGGAGTGTCAGGAGACCAGAGAGGTGGGGATG GACTTCCCCTCCTCGCTTACTGGTAAGGCGCATACGGCGACAAGGTCCAA GCCCATGGCGTGAGATTCCCCTCTGCACAGAGCGTGAAAATGAAAGTAAG AAGGGCTTCATTGAGAACTTGATTTTCAATATCTTGTTCCGCCTCGAAAG CTTTCTTCCCTCCATACACTCCTACACGGGGTTCATCCGGCCACTCCGTA AGAACAACTTCCACCTACAGCTTGGAAGCTTGTTCGACACTCCGGACACC CGAACCCTGGTCTCAGCCGCCGCCAACATTCCTGCGGTCGCTGAGCAGGG CGACCTCTGGGCGCGTGTCTCTACAAAGCTACCACGTACACCTCGCTCCC TCTATGCAGCGCCATTTGTGGCCAACACCAGCGCCTATGATGTCCGTTAT GTTTCCTTCACCAGTGCCTCTCGCGCCTTTCCACTACGGACTTTCGAGAC ATTGACCGACAAAGACATCCGACAACACCATCAAGATCAGCTACAAGGAT CCCGTGAGAAGTGGGACGGTCGTTTTGTCTTGTGGGTTGGCCCTGCGCGA GCACCCATTCCGGAGCAGGCTCGCGGGGAAAAGACCCTCATCATGACTTG GGGAACAGGCGCTGATCATGCCCTCCTTTACAACCAGCTCAACTCCATGT CTCACACGATGCTTGACAGGGCGCAGTCTCATTCGGCGTTGGCAAATGTT GTGGTCGAGGAATGCTTCCCTTTTAAGGAGCGTGACGATGATGGTGAGGA GGAGAAGGATAAGGATGAGGATGAAGACGAGATCCGCAACAACAACGTGG TCTCTCAATCTACGTCACGGGAGACGGTGTGCTGTCTGAGCAAAGCGGAA AGGATGCCCACTTTCTGTCGGATGCCTGAGTTCCTGCATTTAAACCTGCG TGAATTCTTTCCGGCAATTGACTACTTTGTTCACCAGCAAGAAGAAGGAC AAGAACAGCCTTCTGTCTTGCGGAAAATTTCTTTCTAA back to top
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