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Properties
| Property Name | Value |
|---|
| TranscriptId | 600112 |
| Track | FilteredModels2 |
| ProteinId | 600026 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_21 | supercontig | scaffold_21:328963..330482 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7786 ID=mRNA_7786|Name=jgi.p|Nanoce1779_2|600026|organism=Nannochloropsis oceanica|type=mRNA|length=1348bp
ACAGCAAACGTACACGCATCATAGGGAGACGAAGTTTTAAGAGGCCCGTT
CTTGACCGCCTGTCGTCGCCCAAAAGCTCCCGGCGAGTCGCGGCAACGGC
GGCGGCGCTTCCTTCCTACCCTCCTTCCGGCACTTCAGACCCCAGAAGCA
CCACCACGATGGATGGCCCGCCGCGCGACCTGGAGCACCTCTTTGCAGAG
CTGGGCTTGCGGAACTTTAGTTACAAGATGGAGGGTTTGGAAGATGAAGA
GGACGAGGCAATGGCGGACGCCCGTCGCTTCCGCATCTGGCTCGGTGGAT
GGGTCCTTGTTCTCGGCTCCCTCCTTTTCCTGTCATTCTTCCTTTACAGC
ATCGTGCTAGCCAAGCTCTTACCCATGAGACCGTCGGATGGTGGGAAGAT
TAGGAGATGGATGGACCTGGTGCGGGATGACGAGTACTTTTGCTTGTTGG
TGCCGTTGACGCTGGCGCCGGCCACTGTGTTGGGGTATTTGAATTGGGTG
GCCATAGAATTTTATAGGGCCAATTAATTTACCCTATGATTAAACGAATT
AACAAGGGACGTAACCAAAGAATGAAACGGACGAGCAAACAACAGGACAA
AGCAAAACTTTGGCCCTGAGTATATTCTTCCCTCCATTTTGGCCCCCTCT
CACCCTAAAACTCCAACTCCCGCACTCGCATGAACTCCGCCAGCATATCA
TCCGTTACTGCCGCCCTCCTCTCCTGATGTTCACCCACCATTCCCCCGAG
CAACTCAATCAACCGCCCTTTCACCTGACCCGTCATCATCCTCCCCGCTT
TGTACTCCCTCCCAATCTCAGCCAACTCCTCGTCATCTTCGAGGAAAAAA
GTCAAATATTGATACGCAACGTCCACCTCCAAATCGGCTCCTAACTCCTT
CTGTAAGTCTGCAGTTTCTTGCCCTCCGGAGAAAGCACGACCAATTTTTT
GCTTGATTTTCTTGGCCGTGTCAGTGACGTAGATGGCGCTTGACTCGGCA
GAGGCAGACATTTTGCCTCCTTTTCCCTAAAGGGAAGGAGGCCCAAATGG
AAGGAAGGGAAAGTAGGGGGGGGGGGTGGGGTTGTAAGTACGTGTTTCTG
AATGCTAATGGTTTACGTAAAATCAAGAACAGTGAGAAGCGAGAGAAGCC
CATCGCGTGCGTTTCGTTCTCACCGGGCCCATCCTGCCTCCCTCCCTTCC
TCTCTCCCCCCCTTTTCATACCTCCAGTCCCGGGAAAAACTTGGAGTGAA
TCAACGACGGCTTTTTGTACCCTAATCGTGGGGCCACATCTCTCGTCATG
CGGAAATACGCATCCTGGTCGATCGCACACGGAATCAAACACGCCATG back to topprotein sequence of jgi.p|Nanoce1779_2|600026 >mRNA_7786-protein ID=mRNA_7786-protein|Name=jgi.p|Nanoce1779_2|600026|organism=Nannochloropsis oceanica|type=polypeptide|length=123bp
MDGPPRDLEHLFAELGLRNFSYKMEGLEDEEDEAMADARRFRIWLGGWVL
VLGSLLFLSFFLYSIVLAKLLPMRPSDGGKIRRWMDLVRDDEYFCLLVPL
TLAPATVLGYLNWVAIEFYRAN* back to topmRNA from alignment at scaffold_21:328963..330482+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7786 ID=mRNA_7786|Name=jgi.p|Nanoce1779_2|600026|organism=Nannochloropsis oceanica|type=mRNA|length=1520bp|location=Sequence derived from alignment at scaffold_21:328963..330482+ (Nannochloropsis oceanica)
ACAGCAAACGTACACGCATCATAGGGAGACGAAGTTTTAAGAGGCCCGTT
CTTGACCGCCTGTCGTCGCCCAAAAGCTCCCGGCGAGTCGCGGCAACGGC
GGCGGCGCTTCCTTCCTACCCTCCTTCCGGCACTTCAGACCCCAGAAGCA
CCACCACGATGGATGGCCCGCCGCGCGACCTGGAGCACCTCTTTGCAGAG
CTGGGCTTGCGGAACTTTAGTTACAAGATGGAGGGTTTGGAAGATGAAGA
GGACGAGGCAATGGCGGACGGTACGTAGTGGCGTGGGGTGTCTGAGCGTG
CAAGCTTACTCCCGCTATTTATGCCTTTCGTTGTTAATCAACAATTCATT
CACGCTCGCGACTTCGTCGTACCCACCTATCTCGCTTTCCATACCGCCGA
TTTCCATTGCACTTTCCTTCCTCCGTCCTCTCCACAACACAGCCCGTCGC
TTCCGCATCTGGCTCGGTGGATGGGTCCTTGTTCTCGGCTCCCTCCTTTT
CCTGTCATTCTTCCTTTACAGCATCGTGCTAGCCAAGCTCTTACCCATGA
GACCGTCGGATGGTGGGAAGATTAGGAGATGGATGGACCTGGTGCGGGAT
GACGAGTACTTTTGCTTGTTGGTGCCGTTGACGCTGGCGCCGGCCACTGT
GTTGGGGTATTTGAATTGGGTGGCCATAGAATTTTATAGGGCCAATTAAT
TTACCCTATGATTAAACGAATTAACAAGGGACGTAACCAAAGAATGAAAC
GGACGAGCAAACAACAGGACAAAGCAAAACTTTGGCCCTGAGTATATTCT
TCCCTCCATTTTGGCCCCCTCTCACCCTAAAACTCCAACTCCCGCACTCG
CATGAACTCCGCCAGCATATCATCCGTTACTGCCGCCCTCCTCTCCTGAT
GTTCACCCACCATTCCCCCGAGCAACTCAATCAACCGCCCTTTCACCTGA
CCCGTCATCATCCTCCCCGCTTTGTACTCCCTCCCAATCTCAGCCAACTC
CTCGTCATCTTCGAGGAAAAAAGTCAAATATTGATACGCAACGTCCACCT
CCAAATCGGCTCCTAACTCCTTCTGTAAGTCTGCAGTTTCTTGCCCTCCG
GAGAAAGCACGACCAATTTTTTGCTTGATTTTCTTGGCCGTGTCAGTGAC
GTAGATGGCGCTTGACTCGGCAGAGGCAGACATTTTGCCTCCTTTTCCCT
AAAGGGAAGGAGGCCCAAATGGAAGGAAGGGAAAGTAGGGGGGGGGGGTG
GGGTTGTAAGTACGTGTTTCTGAATGCTAATGGTTTACGTAAAATCAAGA
ACAGTGAGAAGCGAGAGAAGCCCATCGCGTGCGTTTCGTTCTCACCGGGC
CCATCCTGCCTCCCTCCCTTCCTCTCTCCCCCCCTTTTCATACCTCCAGT
CCCGGGAAAAACTTGGAGTGAATCAACGACGGCTTTTTGTACCCTAATCG
TGGGGCCACATCTCTCGTCATGCGGAAATACGCATCCTGGTCGATCGCAC
ACGGAATCAAACACGCCATG back to topCoding sequence (CDS) from alignment at scaffold_21:328963..330482+ >mRNA_7786 ID=mRNA_7786|Name=jgi.p|Nanoce1779_2|600026|organism=Nannochloropsis oceanica|type=CDS|length=738bp|location=Sequence derived from alignment at scaffold_21:328963..330482+ (Nannochloropsis oceanica)
ATGGATGGCCCGCCGCGCGACCTGGAGCACCTCTTTGCAGAGCTGGGCTT
GCGGAACTTTAGTTACAAGATGGAGGGTTTGGAAGATGAAGAGGACGAGG
CAATGGCGGACGCCCGTCGCTTCCGCATCTGGCTCGGTGGATGGGTCCTT
GTTCTCGGCTCCCTCCTTTTCCTGTCATTCTTCCTTTACAGCATCGTGCT
AGCCAAGCTCTTACCCATGAGACCGTCGGATGGTGGGAAGATTAGGAGAT
GGATGGACCTGGTGCGGGATGACGAGTACTTTTGCTTGTTGGTGCCGTTG
ACGCTGGCGCCGGCCACTGTGTTGGGGTATTTGAATTGGGTGGCCATAGA
ATTTTATAGGGCCAATTAAATGGATGGCCCGCCGCGCGACCTGGAGCACC
TCTTTGCAGAGCTGGGCTTGCGGAACTTTAGTTACAAGATGGAGGGTTTG
GAAGATGAAGAGGACGAGGCAATGGCGGACGCCCGTCGCTTCCGCATCTG
GCTCGGTGGATGGGTCCTTGTTCTCGGCTCCCTCCTTTTCCTGTCATTCT
TCCTTTACAGCATCGTGCTAGCCAAGCTCTTACCCATGAGACCGTCGGAT
GGTGGGAAGATTAGGAGATGGATGGACCTGGTGCGGGATGACGAGTACTT
TTGCTTGTTGGTGCCGTTGACGCTGGCGCCGGCCACTGTGTTGGGGTATT
TGAATTGGGTGGCCATAGAATTTTATAGGGCCAATTAA back to top
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