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Properties
Property Name | Value |
TranscriptId | 654783 |
Track | FilteredModels2 |
ProteinId | 654697 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_22 | supercontig | scaffold_22:40418..43923 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7874 ID=mRNA_7874|Name=jgi.p|Nanoce1779_2|654697|organism=Nannochloropsis oceanica|type=mRNA|length=2093bp ATGTATGTGCTCGCGCTGCAGGAATGCATGGTTTTGGAGGAACTCAAGGA GGCGGTGCTTGCACGGCTGGAGGAGGGAGGGGGGAAGGAAGGGAGGGAGG GAGGGTGGGCGGTGGTGGCAGAAAATGTCTGGAGCACCAACGGGAACATT GCATTGCTCCTCTATGTGAGAGAGGAGGTCGTGAGGGAGGGAAGGTTTGA GGTCCTGCCTTTGGGGAGGGCTCGATTGAATCTGGGGGTGAGTGTAGGGG TGGGAAAGCTACCGAATAAGGCAGCGGTGGCGATCGCCTGCCGCATCGAC CACAGGAGCGTGGTTTTTGTGTCGGCCCATTTCGCGGCGGACAAGCATGG AAAGGAGGGGGGAAAGGCGCGGGTGAGAGATGTAATGAGGTGCTTGAAGG GGATGAGGGTGGGGAGGGAGGGGGAGGAGGTGGATCTTGAGCATGCGTTT CACCATGTGGTGTTTTGTGGGGATTTGAATTTTCGAATTAAGTTGAAGCC GGAACTGGTTTTGGAGAAGCTCAATGCGTCGGTGAGGAAGGAGGGATTGG GGGAGCTGCAGGAGGAAGCGAAGGAAGAAAGGGAGAAAGAAGAGAAGGGG AGAGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA GGAGGAGGAGGAGGAGGAGGAGGAGGGGAGAGAGGAGGAGGGGGAGGAGG AGGGGGAGGGGGAGGAGGAGGAGGTGGTGATGGAAGGGGCCTCGATCGAG CAAGTGCCAAGCCAGGACAAGGAAGAGAGTAAGGACGGAAAGAAGGAAGG GCACGAATCCGACGGTGGCGCCTCCTTCCTCCGCAGTTGCTGGCAGTGGG TGTATGAGCACGATGAGCTCACCCGTGTGATGACGGAGGAGAAGATCGTG TTTCATGCTTTTAGGGAAGGAAAATTGTGGTTCCCCCCTTCCTTCCGATG GGAGCGAGGAGCCAAAGCTGATTACACCGCTGTGAAAAAAGGAGGGGGAG GGGGAGGGAGGGAGGGAGGGAGGGAAGCGGCCGTGGAGGTGGGGAGGGAG GAGGGGAGAGAAGACGAGGTGCCAGTGTATGCGGTGTTGAGGGTGATGGA TCGGAAAGGAAGAGAGGAGGTGGGGCAAGGTGTCTTGTGCTTAAGGGAAG TTTTTGAGACGTCGAGGAGGGGAGGGAAGGAAGGCGTGCCGATCACGATG GATGTGACGAACGGTGGGAAGTTCATGGGCGTGCTGACGTTACAAGTGGA GGGATGGAAGATGGCCAGGAAGGGGGAGAAGAGAAGAGGAAGGGTGGAGG AGTGTTGAAAGCTGGACAGTGCACAGGTTTCCTGGGAGAGGAGGAAGGGA GGGAGCGCCGTAAAGTTTGGCCTGGGTGAGGCGGCTTGGATAGAAAAGGC AGACGCTGCTCGGGTGGAACGTGGTGATGAAAGTATCGGAGGGGAAAAAA GGGCATTTAAAAGATATGTTGTGAATATGGGAGGGAGAGAGAATGTAAGT AATTCTGCGTGTCCGGAGATTGTTTTTGTAACTCGGCGAAATGTGTGCAG CACAGAAAATTGGCAAAAAGTCGAGACCATCTGACGCACAAATATAGTAA ATGCAATTAAATGGAAAGTATATACAAAAGAGTTGACAAATATTGACGCG GGAAAACAAGAACATTACAAATACATTGTTTATTTGTGTTTTTGGTCGGC ATGGGCCAGGAGTGGCGTAGGGCATAGTGTTGGTACTTCGTGTCTGGCTT ACGTAGACTGTTGTCGTTTTTATTGACATTACTGGTAATATATCTGCTTC TGATGCGCGTGTAATGTATATACCTCTCACTGGTTTTCTTTTGTAGTACT GCTGCATCTATTGACGGTGCTGGAACGCGAAGTCATGTTCGTCGTTCGGG TTGGCGAGCGTTCAGGTTTTGTAGCCGCACCAGAGACAAAGAGACTTAAG CATCCTTTCTCATTCATGAGGTATGTGCTGGTGATAGGAGGCATCGTCAT GGTCTTGTGCTAGACCGCTCGGCAGCACGCATTATCAAAACGAGGGTTCG ATCTCACTTTACCCTCCCCTACCTTTCACCTTCCCACACTCTT back to topprotein sequence of jgi.p|Nanoce1779_2|654697 >mRNA_7874-protein ID=mRNA_7874-protein|Name=jgi.p|Nanoce1779_2|654697|organism=Nannochloropsis oceanica|type=polypeptide|length=436bp MYVLALQECMVLEELKEAVLARLEEGGGKEGREGGWAVVAENVWSTNGNI ALLLYVREEVVREGRFEVLPLGRARLNLGVSVGVGKLPNKAAVAIACRID HRSVVFVSAHFAADKHGKEGGKARVRDVMRCLKGMRVGREGEEVDLEHAF HHVVFCGDLNFRIKLKPELVLEKLNASVRKEGLGELQEEAKEEREKEEKG REEKEEEEEEEEEEEEEEEEEEEEEGREEEGEEEGEGEEEEVVMEGASIE QVPSQDKEESKDGKKEGHESDGGASFLRSCWQWVYEHDELTRVMTEEKIV FHAFREGKLWFPPSFRWERGAKADYTAVKKGGGGGGREGGREAAVEVGRE EGREDEVPVYAVLRVMDRKGREEVGQGVLCLREVFETSRRGGKEGVPITM DVTNGGKFMGVLTLQVEGWKMARKGEKRRGRVEEC* back to topmRNA from alignment at scaffold_22:40418..43923- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7874 ID=mRNA_7874|Name=jgi.p|Nanoce1779_2|654697|organism=Nannochloropsis oceanica|type=mRNA|length=3506bp|location=Sequence derived from alignment at scaffold_22:40418..43923- (Nannochloropsis oceanica) ATGTATGTGCTCGCGCTGCAGGAATGCATGGTTTTGGAGGAACTCAAGGA
GGCGGTGCTTGCACGGCTGGAGGAGGGAGGGGGGAAGGAAGGGAGGGAGG
GAGGGTGGGCGGTGGTGGCAGAAAATGTCTGGAGCACCAACGGGAACATT
GCATTGCTCCTCTATGTGAGAGAGGAGGTCGTGAGGGAGGGAAGGTTTGA
GGTCCTGCCTTTGGGGAGGGCTCGATTGAATCTGGGGGTGAGTGTAGGGG
TGGGAAAGCTACCGAATAAGGCAGCGGTGGCGATCGCCTGCCGCATCGAC
CACAGGAGCGTGGTTTTTGTGTCGGCCCATTTCGCGGCGGACAAGCATGG
AAAGGAGGGGGGAAAGGCGCGGGTGAGAGATGTAATGAGGTGCTTGAAGG
GGATGAGGGTGGGGAGGGAGGGGGAGGAGGTGGATCTTGAGCATGCGTTT
CACCATGTGGTGTTTTGTGGGGATTTGAATTTTCGAATTAAGTTGAAGCC
GGAACTGGTTTTGGAGAAGCTCAATGCGTCGGTGAGGAAGGAGGGATTGG
GGGTAAGAAAGGAAGCATTCTCAGCTGCGGCTTTGGCCATTTCTCACACG
CCTTGCCCTCCTCTGCTTTCTCTTGATGCCGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGAGGAGGCTTGATATGTCCCATGAGGCTCAAGAGATATA
AGGAGATGCTGCAGGTGCGAGAGGAGGAGGAGGAGAAGGAGGAAGAGGAG
GTGGGAGGACGAGGACAAGGACGAGATGGAGAAGGACGAGATGCCCCGCT
GGAGATCGTGGTGATCAGTGGGAAAGAGGAGGAGGACGAGGAGGAAGTTT
TGGAAGGGAAAAGCGAGAAGAAAGAGAAGGTTTCGTTCTCTCCTTTCCCC
TCCTCCCCCTCCTCCTCTTTCTTCTCTCCCCCTCCTCCTCCTTCAGCAGT
CTCTACTTATGTTACAACACATCGGGTGGAAGGGGGTAGGGAGAGAAGGA
GGGAGGGAAGAGTGCATCCTTGTTATGCGTCCGCTCTTGCGGCTCTTCTG
AAGGAGCTGCAGGAGGAAGCGAAGGAAGAAAGGGAGAAAGAAGAGAAGGG
GAGAGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGGGAGAGAGGAGGAGGGGGAGGAG
GAGGGGGAGGGGGAGGAGGAGGAGGTGGTGATGGAAGGGGCCTCGATCGA
GCAAGTGCCAAGCCAGGACAAGGAAGAGAGTAAGGACGGAAAGAAGGAAG
GGCACGAATCCGACGGTGGCGCCTCCTTCCTCCGCAGTTGCTGGCAGTGG
GTGTATGAGCACGATGAGCTCACCCGTGTGATGACGGAGGAGAAGATCGT
GTTTCATGCTTTTAGGGAAGGAAAATTGTGGTTCCCCCCTTCCTTCCGAT
GGGAGCGAGGAGCCAAAGCTGATTACACCGCTGTGAAAAAAGGAGGGGGA
GGGGGAGGGAGGGAGGGAGGGAGGGAAGGTGGGGGGGCGTTTGACGGTTG
CTTCACCCTCTACAAGACCTCGGAGGGCGCGTTGAAAGGCTCACGACCCC
CTTCATATACGGATCGGATCCTCGTACACTCCTTGCCTGACCTAAGAGGA
GGGAGGGAGGGAGGAGGAGGGAGGGAGGGCGGGCGGGCAGAGCTACGGAT
GGAGAGCTACGATGTGTGTGAGGAGATGACGGGGAGTGACCATCGACCAG
TTGCTGCTGTCCTGTCCCTCTTGGTTGATCGCACCTCCCTCGCGCCCTCC
ATGGCTTCCTCGTCTTTGTCCTCTGCCATTGCTGATGGAGAGGAAGGGAT
GGAGGGAAAGGCCATTGCCGCTGCTGCTGCTGTTGTTCATAAGACTCGCA
AGGTCTGTCTGGTCTTGTCGGAGCTTCGTTTCATCTCTCATGCTCATGCC
TTTGGAGGAGGGGAAGAGGGAGGCAGGGAGGGAGGGTGGTTGTCCTCATG
GGGCAGGAGATTGAGTGCGTTGGGGGGCCTGGTGGGAGGAAGGGAAGGAG
GGAGGGAGGTGAGGAAAGTGGTGGTGCATTACCCCTTGGCGATGGAGGGG
AGCGAGTGGATGAATGAAAGGAGACATAGGGAGATGATGAAAGAGGGGGT
GGAGGCCGGGTTTGCTTTTGGGAGGAAGAGGGGGAAGAGATGGGGAAGGG
AGGAGGAGGAGGAGGAGGAGGAGGCGGGGGAGTGGGAGGAGGAAGAAGAG
GAGGAGGAGGAGGAGGAGGAGAAAGAGGAGAAAGACGACGAAAAGGAAGT
GAGGCTGGCAAGAAAGAGGAGACGGAGTTGGAGTCGTGTGATGAGGGAGC
AGCAGCATCATCACTTGGAAAATGTCCATCGGCTGTGCGTGAAGGATGGG
GGGGAGGGCGGGAGGGGTGGAGGGGTCTTCACCTTCTCAGCGGCCGTGGA
GGTGGGGAGGGAGGAGGGGAGAGAAGACGAGGTGCCAGTGTATGCGGTGT
TGAGGGTGATGGATCGGAAAGGAAGAGAGGAGGTGGGGCAAGGTGTCTTG
TGCTTAAGGGAAGTTTTTGAGACGTCGAGGAGGGGAGGGAAGGAAGGCGT
GCCGATCACGATGGATGTGACGAACGGTGGGAAGTTCATGGGCGTGCTGA
CGTTACAAGTGGAGGGATGGAAGATGGCCAGGAAGGGGGAGAAGAGAAGA
GGAAGGGTGGAGGAGTGTTGAAAGCTGGACAGTGCACAGGTTTCCTGGGA
GAGGAGGAAGGGAGGGAGCGCCGTAAAGTTTGGCCTGGGTGAGGCGGCTT
GGATAGAAAAGGCAGACGCTGCTCGGGTGGAACGTGGTGATGAAAGTATC
GGAGGGGAAAAAAGGGCATTTAAAAGATATGTTGTGAATATGGGAGGGAG
AGAGAATGTAAGTAATTCTGCGTGTCCGGAGATTGTTTTTGTAACTCGGC
GAAATGTGTGCAGCACAGAAAATTGGCAAAAAGTCGAGACCATCTGACGC
ACAAATATAGTAAATGCAATTAAATGGAAAGTATATACAAAAGAGTTGAC
AAATATTGACGCGGGAAAACAAGAACATTACAAATACATTGTTTATTTGT
GTTTTTGGTCGGCATGGGCCAGGAGTGGCGTAGGGCATAGTGTTGGTACT
TCGTGTCTGGCTTACGTAGACTGTTGTCGTTTTTATTGACATTACTGGTA
ATATATCTGCTTCTGATGCGCGTGTAATGTATATACCTCTCACTGGTTTT
CTTTTGTAGTACTGCTGCATCTATTGACGGTGCTGGAACGCGAAGTCATG
TTCGTCGTTCGGGTTGGCGAGCGTTCAGGTTTTGTAGCCGCACCAGAGAC
AAAGAGACTTAAGCATCCTTTCTCATTCATGAGGTATGTGCTGGTGATAG
GAGGCATCGTCATGGTCTTGTGCTAGACCGCTCGGCAGCACGCATTATCA
AAACGAGGGTTCGATCTCACTTTACCCTCCCCTACCTTTCACCTTCCCAC
ACTCTT back to topCoding sequence (CDS) from alignment at scaffold_22:40418..43923- >mRNA_7874 ID=mRNA_7874|Name=jgi.p|Nanoce1779_2|654697|organism=Nannochloropsis oceanica|type=CDS|length=3924bp|location=Sequence derived from alignment at scaffold_22:40418..43923- (Nannochloropsis oceanica) CGGCCGTGGAGGTGGGGAGGGAGGAGGGGAGAGAAGACGAGGTGCCAGTG TATGCGGTGTTGAGGGTGATGGATCGGAAAGGAAGAGAGGAGGTGGGGCA AGGTGTCTTGTGCTTAAGGGAAGTTTTTGAGACGTCGAGGAGGGGAGGGA AGGAAGGCGTGCCGATCACGATGGATGTGACGAACGGTGGGAAGTTCATG GGCGTGCTGACGTTACAAGTGGAGGGATGGAAGATGGCCAGGAAGGGGGA GAAGAGAAGAGGAAGGGTGGAGGAGTGTTGAGAGCTGCAGGAGGAAGCGA AGGAAGAAAGGGAGAAAGAAGAGAAGGGGAGAGAGGAGAAGGAGGAGGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA GGAGGGGAGAGAGGAGGAGGGGGAGGAGGAGGGGGAGGGGGAGGAGGAGG AGGTGGTGATGGAAGGGGCCTCGATCGAGCAAGTGCCAAGCCAGGACAAG GAAGAGAGTAAGGACGGAAAGAAGGAAGGGCACGAATCCGACGGTGGCGC CTCCTTCCTCCGCAGTTGCTGGCAGTGGGTGTATGAGCACGATGAGCTCA CCCGTGTGATGACGGAGGAGAAGATCGTGTTTCATGCTTTTAGGGAAGGA AAATTGTGGTTCCCCCCTTCCTTCCGATGGGAGCGAGGAGCCAAAGCTGA TTACACCGCTGTGAAAAAAGGAGGGGGAGGGGGAGGGAGGGAGGGAGGGA GGGAAGATGTATGTGCTCGCGCTGCAGGAATGCATGGTTTTGGAGGAACT CAAGGAGGCGGTGCTTGCACGGCTGGAGGAGGGAGGGGGGAAGGAAGGGA GGGAGGGAGGGTGGGCGGTGGTGGCAGAAAATGTCTGGAGCACCAACGGG AACATTGCATTGCTCCTCTATGTGAGAGAGGAGGTCGTGAGGGAGGGAAG GTTTGAGGTCCTGCCTTTGGGGAGGGCTCGATTGAATCTGGGGGTGAGTG TAGGGGTGGGAAAGCTACCGAATAAGGCAGCGGTGGCGATCGCCTGCCGC ATCGACCACAGGAGCGTGGTTTTTGTGTCGGCCCATTTCGCGGCGGACAA GCATGGAAAGGAGGGGGGAAAGGCGCGGGTGAGAGATGTAATGAGGTGCT TGAAGGGGATGAGGGTGGGGAGGGAGGGGGAGGAGGTGGATCTTGAGCAT GCGTTTCACCATGTGGTGTTTTGTGGGGATTTGAATTTTCGAATTAAGTT GAAGCCGGAACTGGTTTTGGAGAAGCTCAATGCGTCGGTGAGGAAGGAGG GATTGGGGCGGCCGTGGAGGTGGGGAGGGAGGAGGGGAGAGAAGACGAGG TGCCAGTGTATGCGGTGTTGAGGGTGATGGATCGGAAAGGAAGAGAGGAG GTGGGGCAAGGTGTCTTGTGCTTAAGGGAAGTTTTTGAGACGTCGAGGAG GGGAGGGAAGGAAGGCGTGCCGATCACGATGGATGTGACGAACGGTGGGA AGTTCATGGGCGTGCTGACGTTACAAGTGGAGGGATGGAAGATGGCCAGG AAGGGGGAGAAGAGAAGAGGAAGGGTGGAGGAGTGTTGAGAGCTGCAGGA GGAAGCGAAGGAAGAAAGGGAGAAAGAAGAGAAGGGGAGAGAGGAGAAGG AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG GAGGAGGAGGAGGGGAGAGAGGAGGAGGGGGAGGAGGAGGGGGAGGGGGA GGAGGAGGAGGTGGTGATGGAAGGGGCCTCGATCGAGCAAGTGCCAAGCC AGGACAAGGAAGAGAGTAAGGACGGAAAGAAGGAAGGGCACGAATCCGAC GGTGGCGCCTCCTTCCTCCGCAGTTGCTGGCAGTGGGTGTATGAGCACGA TGAGCTCACCCGTGTGATGACGGAGGAGAAGATCGTGTTTCATGCTTTTA GGGAAGGAAAATTGTGGTTCCCCCCTTCCTTCCGATGGGAGCGAGGAGCC AAAGCTGATTACACCGCTGTGAAAAAAGGAGGGGGAGGGGGAGGGAGGGA GGGAGGGAGGGAAGATGTATGTGCTCGCGCTGCAGGAATGCATGGTTTTG GAGGAACTCAAGGAGGCGGTGCTTGCACGGCTGGAGGAGGGAGGGGGGAA GGAAGGGAGGGAGGGAGGGTGGGCGGTGGTGGCAGAAAATGTCTGGAGCA CCAACGGGAACATTGCATTGCTCCTCTATGTGAGAGAGGAGGTCGTGAGG GAGGGAAGGTTTGAGGTCCTGCCTTTGGGGAGGGCTCGATTGAATCTGGG GGTGAGTGTAGGGGTGGGAAAGCTACCGAATAAGGCAGCGGTGGCGATCG CCTGCCGCATCGACCACAGGAGCGTGGTTTTTGTGTCGGCCCATTTCGCG GCGGACAAGCATGGAAAGGAGGGGGGAAAGGCGCGGGTGAGAGATGTAAT GAGGTGCTTGAAGGGGATGAGGGTGGGGAGGGAGGGGGAGGAGGTGGATC TTGAGCATGCGTTTCACCATGTGGTGTTTTGTGGGGATTTGAATTTTCGA ATTAAGTTGAAGCCGGAACTGGTTTTGGAGAAGCTCAATGCGTCGGTGAG GAAGGAGGGATTGGGGCGGCCGTGGAGGTGGGGAGGGAGGAGGGGAGAGA AGACGAGGTGCCAGTGTATGCGGTGTTGAGGGTGATGGATCGGAAAGGAA GAGAGGAGGTGGGGCAAGGTGTCTTGTGCTTAAGGGAAGTTTTTGAGACG TCGAGGAGGGGAGGGAAGGAAGGCGTGCCGATCACGATGGATGTGACGAA CGGTGGGAAGTTCATGGGCGTGCTGACGTTACAAGTGGAGGGATGGAAGA TGGCCAGGAAGGGGGAGAAGAGAAGAGGAAGGGTGGAGGAGTGTTGAGAG CTGCAGGAGGAAGCGAAGGAAGAAAGGGAGAAAGAAGAGAAGGGGAGAGA GGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG AGGAGGAGGAGGAGGAGGAGGGGAGAGAGGAGGAGGGGGAGGAGGAGGGG GAGGGGGAGGAGGAGGAGGTGGTGATGGAAGGGGCCTCGATCGAGCAAGT GCCAAGCCAGGACAAGGAAGAGAGTAAGGACGGAAAGAAGGAAGGGCACG AATCCGACGGTGGCGCCTCCTTCCTCCGCAGTTGCTGGCAGTGGGTGTAT GAGCACGATGAGCTCACCCGTGTGATGACGGAGGAGAAGATCGTGTTTCA TGCTTTTAGGGAAGGAAAATTGTGGTTCCCCCCTTCCTTCCGATGGGAGC GAGGAGCCAAAGCTGATTACACCGCTGTGAAAAAAGGAGGGGGAGGGGGA GGGAGGGAGGGAGGGAGGGAAGATGTATGTGCTCGCGCTGCAGGAATGCA TGGTTTTGGAGGAACTCAAGGAGGCGGTGCTTGCACGGCTGGAGGAGGGA GGGGGGAAGGAAGGGAGGGAGGGAGGGTGGGCGGTGGTGGCAGAAAATGT CTGGAGCACCAACGGGAACATTGCATTGCTCCTCTATGTGAGAGAGGAGG TCGTGAGGGAGGGAAGGTTTGAGGTCCTGCCTTTGGGGAGGGCTCGATTG AATCTGGGGGTGAGTGTAGGGGTGGGAAAGCTACCGAATAAGGCAGCGGT GGCGATCGCCTGCCGCATCGACCACAGGAGCGTGGTTTTTGTGTCGGCCC ATTTCGCGGCGGACAAGCATGGAAAGGAGGGGGGAAAGGCGCGGGTGAGA GATGTAATGAGGTGCTTGAAGGGGATGAGGGTGGGGAGGGAGGGGGAGGA GGTGGATCTTGAGCATGCGTTTCACCATGTGGTGTTTTGTGGGGATTTGA ATTTTCGAATTAAGTTGAAGCCGGAACTGGTTTTGGAGAAGCTCAATGCG TCGGTGAGGAAGGAGGGATTGGGG back to top
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