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Properties
| Property Name | Value |
|---|
| TranscriptId | 603951 |
| Track | FilteredModels2 |
| ProteinId | 603865 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_28 | supercontig | scaffold_28:35758..37194 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8751 ID=mRNA_8751|Name=jgi.p|Nanoce1779_2|603865|organism=Nannochloropsis oceanica|type=mRNA|length=1437bp
AGCAATTGTAGGCAAAGGAGCAATTCCAGATCATGGAGGGCTCCTCCCAG
CCACCTCCTCCACCCTCCACCCCAAATACTGCCCAGTCTTCCCCCGCTAG
GGGCCAGTCCAGGCCTACTTCTCCCTACAGCATCTCCTTGGCCAAGTCTT
ACCTAGCGGCCGCCCGTCGCGATGACAACGACTCTCCTTTGGACAACAAT
GCTGAGTCAGTGATTTCGTCCCCAATGATCCCAGATCCGCCCCCCGCCAA
GGCCCTTCGGGCCTTCCTTATGACGTGTGTTGCCTGGAGCGCTACCGTCA
CCACTTGCCTCGGCCCCTTCTTTCCACTGTACATGAAGGAGAACTTCAAT
GCCTCCACGACGCTGATTGGCCTATGCTTCTCCGTGCTTGCATTGATGCA
ATTTGTGACTTGCCCTTTCGTGATGCCTATCAGTCGCCGCATCAACCGTC
TCAACAGCCTACGATTCGGTCTCCTCGCGTCAGTGGCCGGCGCCCTCCTC
TTCGGCCTAGTTAATCGGATTCCTGGCTTTATTATCGGTAGAATCATCTC
CGGAGTTGGTGACGCCTTCATTGACGTCACCAGCCTGAGCTTCCTCATTC
AGTACTCCCCCAATATTCGCAAGGATATTGGCGTTCTAGAAGGGGCCTCC
AGCATAGGCTACCTCCTAGGTCCTCTTCTGGGCGGATTCCTTTTTTTCAC
GGTGGGCTTCAAAGCTCTTTTCATCATCATGGCAACGCCCTACATTGTCC
TCCTCTTTACCCTCTGCTTCGTGCCCTCCCTCTTCCCTCCTCTCCCCTCA
CATCCCAAAAAAGAGCGTACAAGGAGCTCTCTGGCTTCTATCGAGGAGTC
GACCTTCCCCTTCAAACCCTCCATCGACGACTCCTCCTCTTCCGCTATTT
CTACTGATTCCTTCTCCTCCTCCATCCTCCCTTCCCTCTCGACGCGTCAA
TACCTCTTGCGCTTGGGCCGGGCGCTGTGTAGCAGCCCTTCGATACCTCT
ATATATTTTGGTTGTGATGTTCGTTTCTGGCGGGATCGGATGGTTGGACA
CTTCTTTAGCGGAGCACCTCGGTACGTTCTTTTATGTTATGCGTGGTGCA
CGTAGATGGGGTTGATGGAGGTGGTATGCGTGTTCACCTCCTTTCATGCT
GTGTCTTGTCTCTTCTTAATCGTTACTCCCCCTCCTTCCTCCTCTCCCTC
CCTTCCTCCCCCCCTCCCCTCCAGTCCTTTCTCTGGGCGTTACTATCGAG
CAAGCTGGTCTCCTCTTCACCGTCCACATTCTTACATACCTCTTCTTTTC
CTTTTTTGCTGCTGAAATCGCCTTTCGAATCGGGGAGTGGAGAGCCATCT
TGGGAGGAATGGTGGTGTGGTCGGGAGGGCTGTTACTTTTCGGGCCGGCG
CCGGTCTTTCACTTGTTCAAAGGAATAGGGAGAAAGG back to topprotein sequence of jgi.p|Nanoce1779_2|603865 >mRNA_8751-protein ID=mRNA_8751-protein|Name=jgi.p|Nanoce1779_2|603865|organism=Nannochloropsis oceanica|type=polypeptide|length=361bp
MEGSSQPPPPPSTPNTAQSSPARGQSRPTSPYSISLAKSYLAAARRDDND
SPLDNNAESVISSPMIPDPPPAKALRAFLMTCVAWSATVTTCLGPFFPLY
MKENFNASTTLIGLCFSVLALMQFVTCPFVMPISRRINRLNSLRFGLLAS
VAGALLFGLVNRIPGFIIGRIISGVGDAFIDVTSLSFLIQYSPNIRKDIG
VLEGASSIGYLLGPLLGGFLFFTVGFKALFIIMATPYIVLLFTLCFVPSL
FPPLPSHPKKERTRSSLASIEESTFPFKPSIDDSSSSAISTDSFSSSILP
SLSTRQYLLRLGRALCSSPSIPLYILVVMFVSGGIGWLDTSLAEHLGTFF
YVMRGARRWG* back to topmRNA from alignment at scaffold_28:35758..37194- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8751 ID=mRNA_8751|Name=jgi.p|Nanoce1779_2|603865|organism=Nannochloropsis oceanica|type=mRNA|length=1437bp|location=Sequence derived from alignment at scaffold_28:35758..37194- (Nannochloropsis oceanica)
AGCAATTGTAGGCAAAGGAGCAATTCCAGATCATGGAGGGCTCCTCCCAG
CCACCTCCTCCACCCTCCACCCCAAATACTGCCCAGTCTTCCCCCGCTAG
GGGCCAGTCCAGGCCTACTTCTCCCTACAGCATCTCCTTGGCCAAGTCTT
ACCTAGCGGCCGCCCGTCGCGATGACAACGACTCTCCTTTGGACAACAAT
GCTGAGTCAGTGATTTCGTCCCCAATGATCCCAGATCCGCCCCCCGCCAA
GGCCCTTCGGGCCTTCCTTATGACGTGTGTTGCCTGGAGCGCTACCGTCA
CCACTTGCCTCGGCCCCTTCTTTCCACTGTACATGAAGGAGAACTTCAAT
GCCTCCACGACGCTGATTGGCCTATGCTTCTCCGTGCTTGCATTGATGCA
ATTTGTGACTTGCCCTTTCGTGATGCCTATCAGTCGCCGCATCAACCGTC
TCAACAGCCTACGATTCGGTCTCCTCGCGTCAGTGGCCGGCGCCCTCCTC
TTCGGCCTAGTTAATCGGATTCCTGGCTTTATTATCGGTAGAATCATCTC
CGGAGTTGGTGACGCCTTCATTGACGTCACCAGCCTGAGCTTCCTCATTC
AGTACTCCCCCAATATTCGCAAGGATATTGGCGTTCTAGAAGGGGCCTCC
AGCATAGGCTACCTCCTAGGTCCTCTTCTGGGCGGATTCCTTTTTTTCAC
GGTGGGCTTCAAAGCTCTTTTCATCATCATGGCAACGCCCTACATTGTCC
TCCTCTTTACCCTCTGCTTCGTGCCCTCCCTCTTCCCTCCTCTCCCCTCA
CATCCCAAAAAAGAGCGTACAAGGAGCTCTCTGGCTTCTATCGAGGAGTC
GACCTTCCCCTTCAAACCCTCCATCGACGACTCCTCCTCTTCCGCTATTT
CTACTGATTCCTTCTCCTCCTCCATCCTCCCTTCCCTCTCGACGCGTCAA
TACCTCTTGCGCTTGGGCCGGGCGCTGTGTAGCAGCCCTTCGATACCTCT
ATATATTTTGGTTGTGATGTTCGTTTCTGGCGGGATCGGATGGTTGGACA
CTTCTTTAGCGGAGCACCTCGGTACGTTCTTTTATGTTATGCGTGGTGCA
CGTAGATGGGGTTGATGGAGGTGGTATGCGTGTTCACCTCCTTTCATGCT
GTGTCTTGTCTCTTCTTAATCGTTACTCCCCCTCCTTCCTCCTCTCCCTC
CCTTCCTCCCCCCCTCCCCTCCAGTCCTTTCTCTGGGCGTTACTATCGAG
CAAGCTGGTCTCCTCTTCACCGTCCACATTCTTACATACCTCTTCTTTTC
CTTTTTTGCTGCTGAAATCGCCTTTCGAATCGGGGAGTGGAGAGCCATCT
TGGGAGGAATGGTGGTGTGGTCGGGAGGGCTGTTACTTTTCGGGCCGGCG
CCGGTCTTTCACTTGTTCAAAGGAATAGGGAGAAAGG back to topCoding sequence (CDS) from alignment at scaffold_28:35758..37194- >mRNA_8751 ID=mRNA_8751|Name=jgi.p|Nanoce1779_2|603865|organism=Nannochloropsis oceanica|type=CDS|length=1083bp|location=Sequence derived from alignment at scaffold_28:35758..37194- (Nannochloropsis oceanica)
ATGGAGGGCTCCTCCCAGCCACCTCCTCCACCCTCCACCCCAAATACTGC
CCAGTCTTCCCCCGCTAGGGGCCAGTCCAGGCCTACTTCTCCCTACAGCA
TCTCCTTGGCCAAGTCTTACCTAGCGGCCGCCCGTCGCGATGACAACGAC
TCTCCTTTGGACAACAATGCTGAGTCAGTGATTTCGTCCCCAATGATCCC
AGATCCGCCCCCCGCCAAGGCCCTTCGGGCCTTCCTTATGACGTGTGTTG
CCTGGAGCGCTACCGTCACCACTTGCCTCGGCCCCTTCTTTCCACTGTAC
ATGAAGGAGAACTTCAATGCCTCCACGACGCTGATTGGCCTATGCTTCTC
CGTGCTTGCATTGATGCAATTTGTGACTTGCCCTTTCGTGATGCCTATCA
GTCGCCGCATCAACCGTCTCAACAGCCTACGATTCGGTCTCCTCGCGTCA
GTGGCCGGCGCCCTCCTCTTCGGCCTAGTTAATCGGATTCCTGGCTTTAT
TATCGGTAGAATCATCTCCGGAGTTGGTGACGCCTTCATTGACGTCACCA
GCCTGAGCTTCCTCATTCAGTACTCCCCCAATATTCGCAAGGATATTGGC
GTTCTAGAAGGGGCCTCCAGCATAGGCTACCTCCTAGGTCCTCTTCTGGG
CGGATTCCTTTTTTTCACGGTGGGCTTCAAAGCTCTTTTCATCATCATGG
CAACGCCCTACATTGTCCTCCTCTTTACCCTCTGCTTCGTGCCCTCCCTC
TTCCCTCCTCTCCCCTCACATCCCAAAAAAGAGCGTACAAGGAGCTCTCT
GGCTTCTATCGAGGAGTCGACCTTCCCCTTCAAACCCTCCATCGACGACT
CCTCCTCTTCCGCTATTTCTACTGATTCCTTCTCCTCCTCCATCCTCCCT
TCCCTCTCGACGCGTCAATACCTCTTGCGCTTGGGCCGGGCGCTGTGTAG
CAGCCCTTCGATACCTCTATATATTTTGGTTGTGATGTTCGTTTCTGGCG
GGATCGGATGGTTGGACACTTCTTTAGCGGAGCACCTCGGTACGTTCTTT
TATGTTATGCGTGGTGCACGTAGATGGGGTTGA back to top
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