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Properties
Property Name | Value |
TranscriptId | 606896 |
Track | FilteredModels2 |
ProteinId | 606810 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_36 | supercontig | scaffold_36:173278..174909 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9188 ID=mRNA_9188|Name=jgi.p|Nanoce1779_2|606810|organism=Nannochloropsis oceanica|type=mRNA|length=1376bp ACAGGCTCACATCGGATTTGAGGTTCACAAATTCCAGTCAGTCAGTCAGT CATGTACACGCCTTCCTCCTCGTCCACTTCCCCTGCAAGTATGCGGCGGG TGCAGGCACTAAGTGCGGCAGGCGGCTCATCGGGGGACAGCAAGACGGCA GCCGCCCGTATTTTGGGTTCGGGTACGGCAGGGATTTTTGAGCTGGCCTT GTTCCACCCCTTCGATACGGCCGCTAAACGATTGATGAGTTGGGAGGGCC GCATTATCGTCTCAGGTCAAACTTTAACCAATCTGAACAACGCCGTCTTC CGCAATCAGGCATCTGCCGCACCCCTCACCAAGTGGATGTCTCTCTTTCC CGGAGTCTCTTTCGGTGCCGCCTATAAGGTCTTGCAACGCGCCTATAAAT TCGGCGGGCAGCCATTCGTGCGTGATTATTTGACGACGTATCACAACGAT ATGTTTGAAAGCTCTTTTGGAAAAAGGAACGGGAAGACGATGATCTATGC GACTGCTGGCAGCATCATGGGGGTGGGTGAGATCGTGCTGCTGCCGCTGG ATGTCTTAAAAATCAAGGCCCAGACCAATCCGGAGGCGTTCAAGGGCCGT GGATTGATGAAGATCATTTCGGACGAGGGGGTTAATTTATACCGAGGGGC GAGCTGGACGGCGGCTCGGAATGCGCCGGGCTCGTTTGCGTTGTTCGGCG GGTCGGCAGCCATGAAGGATTATGTGTTTAAGCTGGAGAAGTACAGCGAT GCCACCTTTTTCCAGGACTCCATGGCGAGCGTGGCAGGGGCCGTAGCCTC GATTACGGTAGCACAGCCTCTGGACGTAATCAAAACACGCATCCAGAGGC GCGATTTCAACGATAAGACCTCGGGCACGCGCATTCTGGCCGACCTGGTC AAGAAGGAGGGGTTTGGGGCATTCTTCAAGGGGCTGACGCCCAAGCTTAT CGTGATCGGCCCCAAGCTGGTCTTCTCCTTCACCATCGCCCAGCAGTTGA TGTCCTTCTTCGAGAAGCGCTTTTAAGTGAGGAGGAAAGGAGGATGGAGG GGAGAAAAGGAAGGAGGGTAGAGTATTCTTTTTGTCTGGGTTTTGAGTTG AGAGGAAAGATGGTAAAAAAGGAATGAGAGGAAGAGGAGGAGGATGCGCG GGGCATCGGAGATATTTTTGTAGGTGCATGATTGAAAAGCAGGGAGAAAG GGAGAAAAAGTATGTACGCTTGGGAAGAGGGAGAGGGAAAGGGACAGGGA GAGGGAGAAAGAAAGAGATGCACACTCACAGCCACCAATTTTTGTGTCGA AGAAGTAATTTAACCCAAAAACATCGACGAAAAAATGAACTATACGTGAT CCCATCGTATGTAAAAAGAAGAAGAG back to topprotein sequence of jgi.p|Nanoce1779_2|606810 >mRNA_9188-protein ID=mRNA_9188-protein|Name=jgi.p|Nanoce1779_2|606810|organism=Nannochloropsis oceanica|type=polypeptide|length=325bp MYTPSSSSTSPASMRRVQALSAAGGSSGDSKTAAARILGSGTAGIFELAL FHPFDTAAKRLMSWEGRIIVSGQTLTNLNNAVFRNQASAAPLTKWMSLFP GVSFGAAYKVLQRAYKFGGQPFVRDYLTTYHNDMFESSFGKRNGKTMIYA TAGSIMGVGEIVLLPLDVLKIKAQTNPEAFKGRGLMKIISDEGVNLYRGA SWTAARNAPGSFALFGGSAAMKDYVFKLEKYSDATFFQDSMASVAGAVAS ITVAQPLDVIKTRIQRRDFNDKTSGTRILADLVKKEGFGAFFKGLTPKLI VIGPKLVFSFTIAQQLMSFFEKRF* back to topmRNA from alignment at scaffold_36:173278..174909- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9188 ID=mRNA_9188|Name=jgi.p|Nanoce1779_2|606810|organism=Nannochloropsis oceanica|type=mRNA|length=1632bp|location=Sequence derived from alignment at scaffold_36:173278..174909- (Nannochloropsis oceanica) ACAGGCTCACATCGGATTTGAGGTTCACAAATTCCAGTCAGTCAGTCAGT
CATGTACACGCCTTCCTCCTCGTCCACTTCCCCTGCAAGTATGCGGCGGG
TGCAGGCACTAAGTGCGGCAGGCGGCTCATCGGGGGACAGCAAGACGGCA
GCCGCCCGTATTTTGGGTTCGGGTACGGCAGGGATTTTTGAGCTGGTACG
TTTGATCAATAAGCATGTCCTCAATCCTTTCAAATTGTCTTGCTTATCCC
ATGCATATGACTCACCTTTCCCTTTCACTTCGCCCTTCCCCTCCATTCAA
ATCAAAAACAAAGGCCTTGTTCCACCCCTTCGATACGGCCGCTAAACGAT
TGATGAGTTGGGAGGGCCGCATTATCGTCTCAGGTCAAACTTTAACCAAT
CTGAACAACGCCGTCTTCCGCAATCAGGCATCTGCCGCACCCCTCACCAA
GTGGATGTCTCTCTTTCCCGGAGTCTCTTTCGGTGCCGCCTATAAGGTCT
TGCAACGCGCCTATAAATTCGGCGGGCAGCCATTCGTGCGTGATTATTTG
ACGACGTATCACAACGATATGTTTGAAAGCTCTTTTGGAAAAAGGAACGG
GAAGACGATGATCTATGCGACTGCTGGCAGCATCATGGGGGTGGGTGAGA
TCGTGCTGCTGCCGCTGGATGTCTTAAAAATCAAGGCCCAGACCAATCCG
GAGGCGTTCAAGGGCCGTGGATTGATGAAGATCATTTCGGACGAGGGGGT
TAATTTATACCGAGGGGCGAGCTGGACGGCGGCTCGGAATGCGCCGGGCT
CGTTTGCGTTGTTCGGCGGGTCGGCAGCCATGAAGGATTATGTGTTTAAG
CTGGAGAAGTACAGCGATGCCACCTTTTTCCAGGACTCCATGGCGAGCGT
GGCAGGGGCCGTAGCCTCGATTACGGTAGCACAGCCTCTGGTATGAACGG
GAGGAAGGAAGAGATAGAGGGACAGGGACGGGGAGGAGGAACATGTGTCT
TTTTTTTCTTGCTCTTTTCGCCCCTATCCTCACTTCCTCCCCTACACCGT
CCATCCACTCCTTCCTCTACCTTTACAGGACGTAATCAAAACACGCATCC
AGAGGCGCGATTTCAACGATAAGACCTCGGGCACGCGCATTCTGGCCGAC
CTGGTCAAGAAGGAGGGGTTTGGGGCATTCTTCAAGGGGCTGACGCCCAA
GCTTATCGTGATCGGCCCCAAGCTGGTCTTCTCCTTCACCATCGCCCAGC
AGTTGATGTCCTTCTTCGAGAAGCGCTTTTAAGTGAGGAGGAAAGGAGGA
TGGAGGGGAGAAAAGGAAGGAGGGTAGAGTATTCTTTTTGTCTGGGTTTT
GAGTTGAGAGGAAAGATGGTAAAAAAGGAATGAGAGGAAGAGGAGGAGGA
TGCGCGGGGCATCGGAGATATTTTTGTAGGTGCATGATTGAAAAGCAGGG
AGAAAGGGAGAAAAAGTATGTACGCTTGGGAAGAGGGAGAGGGAAAGGGA
CAGGGAGAGGGAGAAAGAAAGAGATGCACACTCACAGCCACCAATTTTTG
TGTCGAAGAAGTAATTTAACCCAAAAACATCGACGAAAAAATGAACTATA
CGTGATCCCATCGTATGTAAAAAGAAGAAGAG back to topCoding sequence (CDS) from alignment at scaffold_36:173278..174909- >mRNA_9188 ID=mRNA_9188|Name=jgi.p|Nanoce1779_2|606810|organism=Nannochloropsis oceanica|type=CDS|length=2925bp|location=Sequence derived from alignment at scaffold_36:173278..174909- (Nannochloropsis oceanica) GACGTAATCAAAACACGCATCCAGAGGCGCGATTTCAACGATAAGACCTC GGGCACGCGCATTCTGGCCGACCTGGTCAAGAAGGAGGGGTTTGGGGCAT TCTTCAAGGGGCTGACGCCCAAGCTTATCGTGATCGGCCCCAAGCTGGTC TTCTCCTTCACCATCGCCCAGCAGTTGATGTCCTTCTTCGAGAAGCGCTT TTAAGCCTTGTTCCACCCCTTCGATACGGCCGCTAAACGATTGATGAGTT GGGAGGGCCGCATTATCGTCTCAGGTCAAACTTTAACCAATCTGAACAAC GCCGTCTTCCGCAATCAGGCATCTGCCGCACCCCTCACCAAGTGGATGTC TCTCTTTCCCGGAGTCTCTTTCGGTGCCGCCTATAAGGTCTTGCAACGCG CCTATAAATTCGGCGGGCAGCCATTCGTGCGTGATTATTTGACGACGTAT CACAACGATATGTTTGAAAGCTCTTTTGGAAAAAGGAACGGGAAGACGAT GATCTATGCGACTGCTGGCAGCATCATGGGGGTGGGTGAGATCGTGCTGC TGCCGCTGGATGTCTTAAAAATCAAGGCCCAGACCAATCCGGAGGCGTTC AAGGGCCGTGGATTGATGAAGATCATTTCGGACGAGGGGGTTAATTTATA CCGAGGGGCGAGCTGGACGGCGGCTCGGAATGCGCCGGGCTCGTTTGCGT TGTTCGGCGGGTCGGCAGCCATGAAGGATTATGTGTTTAAGCTGGAGAAG TACAGCGATGCCACCTTTTTCCAGGACTCCATGGCGAGCGTGGCAGGGGC CGTAGCCTCGATTACGGTAGCACAGCCTCTGATGTACACGCCTTCCTCCT CGTCCACTTCCCCTGCAAGTATGCGGCGGGTGCAGGCACTAAGTGCGGCA GGCGGCTCATCGGGGGACAGCAAGACGGCAGCCGCCCGTATTTTGGGTTC GGGTACGGCAGGGATTTTTGAGCTGGACGTAATCAAAACACGCATCCAGA GGCGCGATTTCAACGATAAGACCTCGGGCACGCGCATTCTGGCCGACCTG GTCAAGAAGGAGGGGTTTGGGGCATTCTTCAAGGGGCTGACGCCCAAGCT TATCGTGATCGGCCCCAAGCTGGTCTTCTCCTTCACCATCGCCCAGCAGT TGATGTCCTTCTTCGAGAAGCGCTTTTAAGCCTTGTTCCACCCCTTCGAT ACGGCCGCTAAACGATTGATGAGTTGGGAGGGCCGCATTATCGTCTCAGG TCAAACTTTAACCAATCTGAACAACGCCGTCTTCCGCAATCAGGCATCTG CCGCACCCCTCACCAAGTGGATGTCTCTCTTTCCCGGAGTCTCTTTCGGT GCCGCCTATAAGGTCTTGCAACGCGCCTATAAATTCGGCGGGCAGCCATT CGTGCGTGATTATTTGACGACGTATCACAACGATATGTTTGAAAGCTCTT TTGGAAAAAGGAACGGGAAGACGATGATCTATGCGACTGCTGGCAGCATC ATGGGGGTGGGTGAGATCGTGCTGCTGCCGCTGGATGTCTTAAAAATCAA GGCCCAGACCAATCCGGAGGCGTTCAAGGGCCGTGGATTGATGAAGATCA TTTCGGACGAGGGGGTTAATTTATACCGAGGGGCGAGCTGGACGGCGGCT CGGAATGCGCCGGGCTCGTTTGCGTTGTTCGGCGGGTCGGCAGCCATGAA GGATTATGTGTTTAAGCTGGAGAAGTACAGCGATGCCACCTTTTTCCAGG ACTCCATGGCGAGCGTGGCAGGGGCCGTAGCCTCGATTACGGTAGCACAG CCTCTGATGTACACGCCTTCCTCCTCGTCCACTTCCCCTGCAAGTATGCG GCGGGTGCAGGCACTAAGTGCGGCAGGCGGCTCATCGGGGGACAGCAAGA CGGCAGCCGCCCGTATTTTGGGTTCGGGTACGGCAGGGATTTTTGAGCTG GACGTAATCAAAACACGCATCCAGAGGCGCGATTTCAACGATAAGACCTC GGGCACGCGCATTCTGGCCGACCTGGTCAAGAAGGAGGGGTTTGGGGCAT TCTTCAAGGGGCTGACGCCCAAGCTTATCGTGATCGGCCCCAAGCTGGTC TTCTCCTTCACCATCGCCCAGCAGTTGATGTCCTTCTTCGAGAAGCGCTT TTAAGCCTTGTTCCACCCCTTCGATACGGCCGCTAAACGATTGATGAGTT GGGAGGGCCGCATTATCGTCTCAGGTCAAACTTTAACCAATCTGAACAAC GCCGTCTTCCGCAATCAGGCATCTGCCGCACCCCTCACCAAGTGGATGTC TCTCTTTCCCGGAGTCTCTTTCGGTGCCGCCTATAAGGTCTTGCAACGCG CCTATAAATTCGGCGGGCAGCCATTCGTGCGTGATTATTTGACGACGTAT CACAACGATATGTTTGAAAGCTCTTTTGGAAAAAGGAACGGGAAGACGAT GATCTATGCGACTGCTGGCAGCATCATGGGGGTGGGTGAGATCGTGCTGC TGCCGCTGGATGTCTTAAAAATCAAGGCCCAGACCAATCCGGAGGCGTTC AAGGGCCGTGGATTGATGAAGATCATTTCGGACGAGGGGGTTAATTTATA CCGAGGGGCGAGCTGGACGGCGGCTCGGAATGCGCCGGGCTCGTTTGCGT TGTTCGGCGGGTCGGCAGCCATGAAGGATTATGTGTTTAAGCTGGAGAAG TACAGCGATGCCACCTTTTTCCAGGACTCCATGGCGAGCGTGGCAGGGGC CGTAGCCTCGATTACGGTAGCACAGCCTCTGATGTACACGCCTTCCTCCT CGTCCACTTCCCCTGCAAGTATGCGGCGGGTGCAGGCACTAAGTGCGGCA GGCGGCTCATCGGGGGACAGCAAGACGGCAGCCGCCCGTATTTTGGGTTC GGGTACGGCAGGGATTTTTGAGCTG back to top
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