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Properties
| Property Name | Value |
|---|
| TranscriptId | 357000 |
| Track | FilteredModels2 |
| ProteinId | 356914 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_59 | supercontig | scaffold_59:55470..57604 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10796 ID=mRNA_10796|Name=jgi.p|Nanoce1779_2|356914|organism=Nannochloropsis oceanica|type=mRNA|length=1762bp
CCTCCCTCATTGTGATGTATCGGCTACCTCGGCGTTTCTTCTCAACCGCC
CATTCCCCCTCCTTCCCTTTCTCAACCGCCCATTCCCCCTCCTTCCCTCC
CTCCTTCCCTTCCTCCCCTCCCTCAGGTCCTGTCCGAAGCCCTTCTTCCC
ACCCTCCGGGTATGCTTGGAGAGGGACAAGACCCCGCCGGTGGTCATGGC
CGTCGTGGGGTGTTACGATCTCATATTGAAGGAAGTGGGTGATGTGGAGA
CTATCTGCACACAGGTCCTACCCGTTCTCCTCCCCCTCCTCTCCCTCCGC
TCCCTCTCTTCCTCTCAATTCGACCGAGTGGCCCATAAAATCCAATCCCT
CCTTGCCAAGGCCATCGAGAGCCGGCGGGGAGAGATGGGAGGAGGAAGGG
AGGGTAGGAGGGAGGGAGGGCGGGCGGTGTCACCCGGGTATGATGAATTG
ACGTTTGCGAGCGGTGCCGCGAATGCATTAATTTTGCAGCAAGGAGGTGA
TGGAGGAGGAGGAGGAGGTGGAAGGGTGAATGATTTCACTGGTGCAGCTG
CAGCTGCTGCCTCCTCCTCCTCCCCTCCCTCCTCCTCCATCACCGATCCG
CTCGAAGATTGGTCATGGTTGAAGCAAACCCTCCCTCCCGCCGTCTCTGC
CCCTCCCTCCCTCCCTCCCTCCACCGGGGCCTTTGACTCGGGCGGCGGGC
CTAAATATGATGCTGGCGCTAATCCCTATATGATTGACTTCCCCTCGTCC
TCTTCTTCCATTGCCTCTTCACCAGCCCTTCCGCCATTAAAACCTGCTTC
CTCTCAGCGGAAACAGCCTTCTTCCCCCACCTCCTTTTTCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCACC
ATCATTCAGGCAACCGGTCGGCCCCGTCTGGCACGCGTTCCGTCCCCTTC
CTCCCTTACGTCCTCCTCCCCTCCTTCCTCATCCTCGTCCATGTTTGATG
GCCTCAAGCGGTCCCCGTTGTCGGGCCCTCAACGATCCGGGAGCAGAGGA
GGAGGAGGAGGGCTGAATAGCGATGGTGTAAACCCCTCGACGGCCACAGT
GCTGCTTCCTGTCAAGGCTTCTGTTCCTCTTTCTTCTTCGCTTCCTCATT
CAACCACGCGAGGTCAGCAGCAGCAGCAGCAGCAGCAGCAGCCATCACAT
TCACAAACAGGATCGAACTCTTTCTTGGCTCCGATTCAGCCTATCCCTGT
ACATCAATTTGGAAGGGGGAAAGGTCGTGGGAGCTATCCACAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAAAATATGGGAGGGTACGATCCAATGAGT
GCATTTGATGGGCTTGACGGTGGTGCATCTGGCGGAGGAGGAGGAGGTGG
GATAGGAGGACAGCCAGCACAAGGACAGGGACAGAGAGGAGGAGGGTGGT
GAGTGTACTTTTAATGAAAATCGAAGAAAATTAGGCAAGCGATTATTTAA
TGTAAAAAGACGTAAAGCCATGTGCATACAAAAGACAAGGATGAGCACTT
CAGTACATTGACTGACCACAAAGAAGAAATGGACCATGATTGTCACCGAT
AAATTAGTACATCGTGTCTACATTTTGTATTCTTTGACTCTCTAATTCAA
ATATCTCTTTATATTACCATTATATTACCATTACTTGTGCTTTTGCCTTA
CTCCTTTCACACACATGTCAAATCAATTCCACTCTACCATCCCATAGGGG
CCAAATTCTGTT back to topprotein sequence of jgi.p|Nanoce1779_2|356914 >mRNA_10796-protein ID=mRNA_10796-protein|Name=jgi.p|Nanoce1779_2|356914|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MAVVGCYDLILKEVGDVETICTQVLPVLLPLLSLRSLSSSQFDRVAHKIQ
SLLAKAIESRRGEMGGGREGRREGGRAVSPGYDELTFASGAANALILQQG
GDGGGGGGGRVNDFTGAAAAAASSSSPPSSSITDPLEDWSWLKQTLPPAV
SAPPSLPPSTGAFDSGGGPKYDAGANPYMIDFPSSSSSIASSPALPPLKP
ASSQRKQPSSPTSFFSSSSSSSSSSSSSSSSSSSTIIQATGRPRLARVPS
PSSLTSSSPPSSSSSMFDGLKRSPLSGPQRSGSRGGGGGLNSDGVNPSTA
TVLLPVKASVPLSSSLPHSTTRGQQQQQQQQQPSHSQTGSNSFLAPIQPI
PVHQFGRGKGRGSYPQQQQQQQQQQQNMGGYDPMSAFDGLDGGASGGGGG
GGIGGQPAQGQGQRGGGW* back to topmRNA from alignment at scaffold_59:55470..57604+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10796 ID=mRNA_10796|Name=jgi.p|Nanoce1779_2|356914|organism=Nannochloropsis oceanica|type=mRNA|length=2135bp|location=Sequence derived from alignment at scaffold_59:55470..57604+ (Nannochloropsis oceanica)
CCTCCCTCATTGTGATGTATCGGCTACCTCGGCGTTTCTTCTCAACCGCC
CATTCCCCCTCCTTCCCTTTCTCAACCGCCCATTCCCCCTCCTTCCCTCC
CTCCTTCCCTTCCTCCCCTCCCTCAGGTCCTGTCCGAAGCCCTTCTTCCC
ACCCTCCGGGTATGCTTGGAGAGGGACAAGACCCCGCCGGTGGTCATGGC
CGTCGTGGGGTGTTACGATCTCATATTGAAGGAAGTGGGTGATGTGGAGG
TAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGCAGGGATGGCGAGAACAGGAGTGAAGAAGAATGGAGCACCTGGTG
GTGGAGTCGGAGCCGTGCTTGTCGTGACCGACTTGCAGCATCCCCGGCCA
ACCCCCCCCTCCTCCCTCCCTCCATTCCGTTTTAAGACTATCTGCACACA
GGTCCTACCCGTTCTCCTCCCCCTCCTCTCCCTCCGCTCCCTCTCTTCCT
CTCAATTCGACCGAGTGGCCCATAAAATCCAATCCCTCCTTGCCAAGGCC
ATCGAGAGCCGGCGGGGAGAGATGGGAGGAGGAAGGGAGGGTAGGAGGGA
GGGAGGGCGGGCGGTGTCACCCGGGTATGATGAATTGACGTTTGCGAGCG
GTGCCGCGAATGCATTAATTTTGCAGCAAGGAGGTGATGGAGGAGGAGGA
GGAGGTGGAAGGGTGAATGATTTCACTGGTGCAGCTGCAGCTGCTGCCTC
CTCCTCCTCCCCTCCCTCCTCCTCCATCACCGATCCGCTCGAAGATTGGT
CATGGTTGAAGCAAACCCTCCCTCCCGCCGTCTCTGCCCCTCCCTCCCTC
CCTCCCTCCACCGGGGCCTTTGACTCGGGCGGCGGGCCTAAATATGATGC
TGGCGCTAATCCCTATATGATTGACTTCCCCTCGTCCTCTTCTTCCATTG
CCTCTTCACCAGCCCTTCCGCCATTAAAACCTGCTTCCTCTCAGCGGAAA
CAGCCTTCTTCCCCCACCTCCTTTTTCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCTCCACCATCATTCAGGCAA
CCGGTCGGCCCCGTCTGGCACGCGTTCCGTCCCCTTCCTCCCTTACGTCC
TCCTCCCCTCCTTCCTCATCCTCGTCCATGTTTGATGGCCTCAAGCGGTC
CCCGTTGTCGGGCCCTCAACGATCCGGGAGCAGTGGAGGAGGAGGAGAAG
GAGGAGGAGGAGGAGGAGGAGGGCTGAATAGCGATGGTGTAAACCCCTCG
ACGGCCACAGTGCTGCTTCCTGTCAAGGCTTCTGTTCCTCTTTCTTCTTC
GCTTCCTCATTCAACCACGGTAATGATGGGAGGTAGAGGAGGAGGAGGAG
GGGAGGGGGGAGGAGGAAGAGCAGGATCAGGAGCAGGAGCAGGAGCAGGA
GAAGGGGTCGGGGGAGGAGTGGGAGGGCAGCAGCATTTAATGGGAGACTT
GTCCTCTTCCTTCCCATTCATTGAACCACAGCGAGGTCAGCAGCAGCAGC
AGCAGCAGCAGCAGCCATCACATTCACAAACAGGATCGAACTCTTTCTTG
GCTCCGATTCAGCCTATCCCTGTACATCAATTTGGAAGGGGGAAAGGTCG
TGGGAGCTATCCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAATA
TGGGAGGGTACGATCCAATGAGTGCATTTGATGGGCTTGACGGTGGTGCA
TCTGGCGGAGGAGGAGGAGGTGGGATAGGAGGACAGCCAGCACAAGGACA
GGGACAGAGAGGAGGAGGGTGGTGAGTGTACTTTTAATGAAAATCGAAGA
AAATTAGGCAAGCGATTATTTAATGTAAAAAGACGTAAAGCCATGTGCAT
ACAAAAGACAAGGATGAGCACTTCAGTACATTGACTGACCACAAAGAAGA
AATGGACCATGATTGTCACCGATAAATTAGTACATCGTGTCTACATTTTG
TATTCTTTGACTCTCTAATTCAAATATCTCTTTATATTACCATTATATTA
CCATTACTTGTGCTTTTGCCTTACTCCTTTCACACACATGTCAAATCAAT
TCCACTCTACCATCCCATAGGGGCCAAATTCTGTT back to topCoding sequence (CDS) from alignment at scaffold_59:55470..57604+ >mRNA_10796 ID=mRNA_10796|Name=jgi.p|Nanoce1779_2|356914|organism=Nannochloropsis oceanica|type=CDS|length=5028bp|location=Sequence derived from alignment at scaffold_59:55470..57604+ (Nannochloropsis oceanica)
ATGGCCGTCGTGGGGTGTTACGATCTCATATTGAAGGAAGTGGGTGATGT
GGAGACTATCTGCACACAGGTCCTACCCGTTCTCCTCCCCCTCCTCTCCC
TCCGCTCCCTCTCTTCCTCTCAATTCGACCGAGTGGCCCATAAAATCCAA
TCCCTCCTTGCCAAGGCCATCGAGAGCCGGCGGGGAGAGATGGGAGGAGG
AAGGGAGGGTAGGAGGGAGGGAGGGCGGGCGGTGTCACCCGGGTATGATG
AATTGACGTTTGCGAGCGGTGCCGCGAATGCATTAATTTTGCAGCAAGGA
GGTGATGGAGGAGGAGGAGGAGGTGGAAGGGTGAATGATTTCACTGGTGC
AGCTGCAGCTGCTGCCTCCTCCTCCTCCCCTCCCTCCTCCTCCATCACCG
ATCCGCTCGAAGATTGGTCATGGTTGAAGCAAACCCTCCCTCCCGCCGTC
TCTGCCCCTCCCTCCCTCCCTCCCTCCACCGGGGCCTTTGACTCGGGCGG
CGGGCCTAAATATGATGCTGGCGCTAATCCCTATATGATTGACTTCCCCT
CGTCCTCTTCTTCCATTGCCTCTTCACCAGCCCTTCCGCCATTAAAACCT
GCTTCCTCTCAGCGGAAACAGCCTTCTTCCCCCACCTCCTTTTTCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTCCT
CCACCATCATTCAGGCAACCGGTCGGCCCCGTCTGGCACGCGTTCCGTCC
CCTTCCTCCCTTACGTCCTCCTCCCCTCCTTCCTCATCCTCGTCCATGTT
TGATGGCCTCAAGCGGTCCCCGTTGTCGGGCCCTCAACGATCCGGGAGCA
GAGGAGGAGGAGGAGGGCTGAATAGCGATGGTGTAAACCCCTCGACGGCC
ACAGTGCTGCTTCCTGTCAAGGCTTCTGTTCCTCTTTCTTCTTCGCTTCC
TCATTCAACCACGCGAGGTCAGCAGCAGCAGCAGCAGCAGCAGCAGCCAT
CACATTCACAAACAGGATCGAACTCTTTCTTGGCTCCGATTCAGCCTATC
CCTGTACATCAATTTGGAAGGGGGAAAGGTCGTGGGAGCTATCCACAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAAAATATGGGAGGGTACGATCCAA
TGAGTGCATTTGATGGGCTTGACGGTGGTGCATCTGGCGGAGGAGGAGGA
GGTGGGATAGGAGGACAGCCAGCACAAGGACAGGGACAGAGAGGAGGAGG
GTGGTGAATGGCCGTCGTGGGGTGTTACGATCTCATATTGAAGGAAGTGG
GTGATGTGGAGACTATCTGCACACAGGTCCTACCCGTTCTCCTCCCCCTC
CTCTCCCTCCGCTCCCTCTCTTCCTCTCAATTCGACCGAGTGGCCCATAA
AATCCAATCCCTCCTTGCCAAGGCCATCGAGAGCCGGCGGGGAGAGATGG
GAGGAGGAAGGGAGGGTAGGAGGGAGGGAGGGCGGGCGGTGTCACCCGGG
TATGATGAATTGACGTTTGCGAGCGGTGCCGCGAATGCATTAATTTTGCA
GCAAGGAGGTGATGGAGGAGGAGGAGGAGGTGGAAGGGTGAATGATTTCA
CTGGTGCAGCTGCAGCTGCTGCCTCCTCCTCCTCCCCTCCCTCCTCCTCC
ATCACCGATCCGCTCGAAGATTGGTCATGGTTGAAGCAAACCCTCCCTCC
CGCCGTCTCTGCCCCTCCCTCCCTCCCTCCCTCCACCGGGGCCTTTGACT
CGGGCGGCGGGCCTAAATATGATGCTGGCGCTAATCCCTATATGATTGAC
TTCCCCTCGTCCTCTTCTTCCATTGCCTCTTCACCAGCCCTTCCGCCATT
AAAACCTGCTTCCTCTCAGCGGAAACAGCCTTCTTCCCCCACCTCCTTTT
TCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCT
TCCTCCTCCACCATCATTCAGGCAACCGGTCGGCCCCGTCTGGCACGCGT
TCCGTCCCCTTCCTCCCTTACGTCCTCCTCCCCTCCTTCCTCATCCTCGT
CCATGTTTGATGGCCTCAAGCGGTCCCCGTTGTCGGGCCCTCAACGATCC
GGGAGCAGAGGAGGAGGAGGAGGGCTGAATAGCGATGGTGTAAACCCCTC
GACGGCCACAGTGCTGCTTCCTGTCAAGGCTTCTGTTCCTCTTTCTTCTT
CGCTTCCTCATTCAACCACGCGAGGTCAGCAGCAGCAGCAGCAGCAGCAG
CAGCCATCACATTCACAAACAGGATCGAACTCTTTCTTGGCTCCGATTCA
GCCTATCCCTGTACATCAATTTGGAAGGGGGAAAGGTCGTGGGAGCTATC
CACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAATATGGGAGGGTAC
GATCCAATGAGTGCATTTGATGGGCTTGACGGTGGTGCATCTGGCGGAGG
AGGAGGAGGTGGGATAGGAGGACAGCCAGCACAAGGACAGGGACAGAGAG
GAGGAGGGTGGTGAATGGCCGTCGTGGGGTGTTACGATCTCATATTGAAG
GAAGTGGGTGATGTGGAGACTATCTGCACACAGGTCCTACCCGTTCTCCT
CCCCCTCCTCTCCCTCCGCTCCCTCTCTTCCTCTCAATTCGACCGAGTGG
CCCATAAAATCCAATCCCTCCTTGCCAAGGCCATCGAGAGCCGGCGGGGA
GAGATGGGAGGAGGAAGGGAGGGTAGGAGGGAGGGAGGGCGGGCGGTGTC
ACCCGGGTATGATGAATTGACGTTTGCGAGCGGTGCCGCGAATGCATTAA
TTTTGCAGCAAGGAGGTGATGGAGGAGGAGGAGGAGGTGGAAGGGTGAAT
GATTTCACTGGTGCAGCTGCAGCTGCTGCCTCCTCCTCCTCCCCTCCCTC
CTCCTCCATCACCGATCCGCTCGAAGATTGGTCATGGTTGAAGCAAACCC
TCCCTCCCGCCGTCTCTGCCCCTCCCTCCCTCCCTCCCTCCACCGGGGCC
TTTGACTCGGGCGGCGGGCCTAAATATGATGCTGGCGCTAATCCCTATAT
GATTGACTTCCCCTCGTCCTCTTCTTCCATTGCCTCTTCACCAGCCCTTC
CGCCATTAAAACCTGCTTCCTCTCAGCGGAAACAGCCTTCTTCCCCCACC
TCCTTTTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCTTCCTCCTCCACCATCATTCAGGCAACCGGTCGGCCCCGTCTGG
CACGCGTTCCGTCCCCTTCCTCCCTTACGTCCTCCTCCCCTCCTTCCTCA
TCCTCGTCCATGTTTGATGGCCTCAAGCGGTCCCCGTTGTCGGGCCCTCA
ACGATCCGGGAGCAGAGGAGGAGGAGGAGGGCTGAATAGCGATGGTGTAA
ACCCCTCGACGGCCACAGTGCTGCTTCCTGTCAAGGCTTCTGTTCCTCTT
TCTTCTTCGCTTCCTCATTCAACCACGCGAGGTCAGCAGCAGCAGCAGCA
GCAGCAGCAGCCATCACATTCACAAACAGGATCGAACTCTTTCTTGGCTC
CGATTCAGCCTATCCCTGTACATCAATTTGGAAGGGGGAAAGGTCGTGGG
AGCTATCCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAAATATGGG
AGGGTACGATCCAATGAGTGCATTTGATGGGCTTGACGGTGGTGCATCTG
GCGGAGGAGGAGGAGGTGGGATAGGAGGACAGCCAGCACAAGGACAGGGA
CAGAGAGGAGGAGGGTGGTGAATGGCCGTCGTGGGGTGTTACGATCTCAT
ATTGAAGGAAGTGGGTGATGTGGAGACTATCTGCACACAGGTCCTACCCG
TTCTCCTCCCCCTCCTCTCCCTCCGCTCCCTCTCTTCCTCTCAATTCGAC
CGAGTGGCCCATAAAATCCAATCCCTCCTTGCCAAGGCCATCGAGAGCCG
GCGGGGAGAGATGGGAGGAGGAAGGGAGGGTAGGAGGGAGGGAGGGCGGG
CGGTGTCACCCGGGTATGATGAATTGACGTTTGCGAGCGGTGCCGCGAAT
GCATTAATTTTGCAGCAAGGAGGTGATGGAGGAGGAGGAGGAGGTGGAAG
GGTGAATGATTTCACTGGTGCAGCTGCAGCTGCTGCCTCCTCCTCCTCCC
CTCCCTCCTCCTCCATCACCGATCCGCTCGAAGATTGGTCATGGTTGAAG
CAAACCCTCCCTCCCGCCGTCTCTGCCCCTCCCTCCCTCCCTCCCTCCAC
CGGGGCCTTTGACTCGGGCGGCGGGCCTAAATATGATGCTGGCGCTAATC
CCTATATGATTGACTTCCCCTCGTCCTCTTCTTCCATTGCCTCTTCACCA
GCCCTTCCGCCATTAAAACCTGCTTCCTCTCAGCGGAAACAGCCTTCTTC
CCCCACCTCCTTTTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCTTCCTCCTCCACCATCATTCAGGCAACCGGTCGGCCC
CGTCTGGCACGCGTTCCGTCCCCTTCCTCCCTTACGTCCTCCTCCCCTCC
TTCCTCATCCTCGTCCATGTTTGATGGCCTCAAGCGGTCCCCGTTGTCGG
GCCCTCAACGATCCGGGAGCAGAGGAGGAGGAGGAGGGCTGAATAGCGAT
GGTGTAAACCCCTCGACGGCCACAGTGCTGCTTCCTGTCAAGGCTTCTGT
TCCTCTTTCTTCTTCGCTTCCTCATTCAACCACGCGAGGTCAGCAGCAGC
AGCAGCAGCAGCAGCAGCCATCACATTCACAAACAGGATCGAACTCTTTC
TTGGCTCCGATTCAGCCTATCCCTGTACATCAATTTGGAAGGGGGAAAGG
TCGTGGGAGCTATCCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAA
ATATGGGAGGGTACGATCCAATGAGTGCATTTGATGGGCTTGACGGTGGT
GCATCTGGCGGAGGAGGAGGAGGTGGGATAGGAGGACAGCCAGCACAAGG
ACAGGGACAGAGAGGAGGAGGGTGGTGA back to top
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