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Properties
| Property Name | Value |
|---|
| TranscriptId | 611911 |
| Track | FilteredModels2 |
| ProteinId | 611825 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_59 | supercontig | scaffold_59:34688..38498 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10787 ID=mRNA_10787|Name=jgi.p|Nanoce1779_2|611825|organism=Nannochloropsis oceanica|type=mRNA|length=2974bp
GATGGCTTGTTTCTTTTATTTTTTCTTCGTTCACGTTACCTACCTCTGTC
CATTATATTTGAGTGGAAGGCATCCAGGTAATGACATCAAGAGATACGCG
GCCCATGTAAACGACCTGATGTTTCTCTGGTCCATATCGACGCGCTCGGG
CTCTCCCGTTCTCCCCTTCCGTACTGGAAAATGGGACGGGAGCGATCTTT
TTTCCCCGTCGTACCACGATGCCCTTTCTCTGGTTAAGATCCTGCGGCCG
TGTTTATGTGCGTCGGGCGCCAAGGAGTGCTTACCAAGTAGTATGGCGGC
GATGATGCGTGGCGTTCGGGGCCCATGTGTCGATAGCGTCTGTTCGCCCC
TCACTGTCAGTCTCCCACGCCCTCCACAGGAGGGCGCACAGTCTCCGACA
ACCCGCTCCCAAAGATTGCATTATGCATGCGACAGCGTATCATACCAACA
AGACGCTTGGTGAAGGGGCCGAGGAGAAGACCTCCTTGACAGTAGCCTGC
CCTTGTGCCAGAGGCATAGGCGATGACCGTATCCATACAGAGTCTACGAC
TTTTTGGCCCTGTCCGATCCCCTCTTGCCTTGCACACACGCACTTATTCT
CCTTTCACATCCCACGACAACTCATACACACAGCACCCACTCTCTCCGAT
AACAACCATGAAGTTGACCGTATCCTCCGTCCTCCTCGCCGGCGTCGCCC
TCTTGTCCGCCATGTCCGCTGTTAGCGGCAGCGGCCACGTCCAAACCGGC
GCCAAGTCCGTGCTCGTGAAAAAGGGTAGAATCGTGACTGTCACCCAGAG
GTTTGTAGCCCAGAGCTTCAACGTTGGTCGTCGTCTTGTTGATGTTCAGG
AGCCTGTCATGGCTGGGCTCACGACTGACCCTGAGGGGGAGTTTGACTTC
GGCTTCGGCCCCTTCTCCTCTACCAACAAAACCAAACGCAACAAGACGGC
CAAAAGCAAGACGGACAAATGGGCGGACGACGTCGGAATCACCATCAAGT
CGGCCAAGATCCTCCCCAATACGTGGAAGCCTAAGGTGTCTGCGAACATG
ACCTCGACCGTCGATGGTGACTACGCCATCTTCGAGCTCCCGCAGGACGG
CCTGGACCTGAACAGGGAGTACAAGATCGTCTACAAGGTGCGCGTTGGGA
GGGGCATCCCCTCTGGTTCCTTCATCGAGCTTCCGTATAATTTCGATGGT
ATCTCCTTTGGAGACGACTTTGCTGTGACTGTTATTGTCAAGTAATCAAA
TGTCTTGGCCTGGCTCCGCTCCCTTGTGGAAAAATGAGGGTCGAGATGCA
TGTGTTGCGATCATGATGAAAAATGGTGGCGTGGCTTTTTTTCGTACATA
TATGTGTGTAAATCTGTTGTGATGTACATGCGTACATCTATCCGTGCGCG
GCGTGATCCCTGCTTCGCGTCAGATGTTGTACGTTTCGCTGTGTGTCATG
TGTTTGTGTTTGTGTCTGTCTACGTGTAATTGTGTGTGTTGGCGTGTAGG
TGTGGATGTTTCCTCTTTCAAAGGGAAATATTATAAGAAAGACAAAAAGC
TACAACACCTGAGTGGCAATCCATTTTTTTGTTTGGTGGACATAGCCTCA
ATACGGTGGGGGGTCACGATCCTTGTTTTTTTAAACACATGACGTTCCCA
TCGCTGTTGTTGATGCCCTGCTGTTGCACCGGCAAGATCACCTTTCTAAT
TTTCTTTCTTCTCTTCCTTGTCGTGTGTGCAGACATTCAAAGAGTCAATA
CACACAGTCAGATGGTTAAATCAATATAAATGATTTAAAAATGAATATAT
GGTAAAGTAGGCGAAGTAGGGGATGAGGAGAGTATGAGGAAAATGAACTA
GGGCGAGGACAGATCCTTCCGCTACAGATTTATGGTCATATAATGTTTGT
GTTGGTCTCGTCTTGTTGGATATGTCAGGGGATTGGCACGGGACCTTTGA
GGGACAGTACACTACGTTTTCTCAGAATGAGTATTGATATTTTGGACTCG
CAAATGGTTATTGATGACCCGTTTAGATGTTTTGGTAATTCAAGAGGCTT
AACCATTGTCACTATCGAACTCACAAAAGATTCAATCAATCAATCAATCC
ACTTTTTCAGCCTATACAACTCATTCTGGCACATTTCGTGTGTCATTGAC
GACTTTAAAGTAATATCTTCACTGTAGGGTTCCAAAGATTCCTCGAGGCA
TCGATTTCGGACCCTCTGACGCTCTCGCGGTGGGGTAGCCCTGCATGGGC
TGGATTCTTTCTTCCACTAAGAGCTCACTTGCCATGCTTTACACTTCCTG
TCCTTCCTCCAACAGCTTGAGGCCTATCAAAGCAATTGATTTCTTTCTCT
CGGATGCCTTTAGTCTGTCCCTTCTTTTCTCTTTTCTTTCCCCCCCCTTC
TGTCTCCTCTGCTTTCTCCGTTCAAGAAGCATCGCCCTACTTCACTCAAG
CACGCAAGCGACGCCGATCTCTGTGCAATTCCACTGCACACATCCTTCGT
CATCGCCTCTACCTTCCCTTCTTCCTTACGTCTCTTCCACATTCCCCCCT
CCTTTCTTCACGTGCATCCAAGTGCACGTCCTTGTTGCCGTACACTCTAC
ATACGCATATACAGCTACACGTGCAAGTCACAAGCAGTACGCAGAATGTT
GTTACTTTCGTTCACATCTCCCTGTTTCACCGGCTGTCTTCCCCCTTCTT
GATTTTCTAGGCCATTTCCGCATTTTCCTCTTGTTGCTTTCTGTCTCATT
CTGTCCTCTCTTTACCTCTCTTTTCTTCTCGTTGCTTCCCTTCTCTTTGC
TTCACTTCTATACTCCCTTTTCCCTCTCCTACCGGTCGTCCCCGAGAATG
TTTTGGGCACTCAATTGCTTCAACCCGGCTACAGCCCCCTGGAAACCAGC
ACTGTAGTCCAGGGCAACCTCGTTCGTGATGAAGTCCGCGCATTTATCGT
GGTGCGAGTCGTCTTCCCTGGGCC back to topprotein sequence of jgi.p|Nanoce1779_2|611825 >mRNA_10787-protein ID=mRNA_10787-protein|Name=jgi.p|Nanoce1779_2|611825|organism=Nannochloropsis oceanica|type=polypeptide|length=241bp
MTVSIQSLRLFGPVRSPLALHTRTYSPFTSHDNSYTQHPLSPITTMKLTV
SSVLLAGVALLSAMSAVSGSGHVQTGAKSVLVKKGRIVTVTQRFVAQSFN
VGRRLVDVQEPVMAGLTTDPEGEFDFGFGPFSSTNKTKRNKTAKSKTDKW
ADDVGITIKSAKILPNTWKPKVSANMTSTVDGDYAIFELPQDGLDLNREY
KIVYKVRVGRGIPSGSFIELPYNFDGISFGDDFAVTVIVK* back to topmRNA from alignment at scaffold_59:34688..38498- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10787 ID=mRNA_10787|Name=jgi.p|Nanoce1779_2|611825|organism=Nannochloropsis oceanica|type=mRNA|length=3811bp|location=Sequence derived from alignment at scaffold_59:34688..38498- (Nannochloropsis oceanica)
GATGGCTTGTTTCTTTTATTTTTTCTTCGTTCACGTTACCTACCTCTGTC
CATTATATTTGAGTGGAAGGCATCCAGGTAATGACATCAAGAGATACGCG
GCCCATGTAAACGACCTGATGTTTCTCTGGTCCATATCGACGCGCTCGGG
CTCTCCCGTTCTCCCCTTCCGTACTGGAAAATGGGACGGGAGCGATCTTT
TTTCCCCGTCGTACCACGATGCCCTTTCTCTGGTTAAGATCCTGCGGCCG
TGTTTATGTGCGTCGGGCGCCAAGGAGTGCTTACCAAGTAGTATGGCGGC
GATGATGCGTGGCGTTCGGGGCCCATGTGTCGATAGCGTCTGTTCGCCCC
TCACTGTCAGTCTCCCACGCCCTCCACAGGAGGGCGCACAGTCTCCGACA
ACCCGCTCCCAAAGATTGCATTATGCATGCGACAGCGTATCATACCAACA
AGACGCTTGGTGAAGGGGCCGAGGAGAAGACCTCCTTGACAGTAGCCTGC
CCTTGTGCCAGAGGCATAGGCGATGACCGTATCCATACAGAGTCTACGAC
TTTTTGGCCCTGTCCGATCCCCTCTTGCCTTGCACACACGCACTTATTCT
CCTTTCACATCCCACGACAACTCATACACACAGCACCCACTCTCTCCGAT
AACAACCATGAAGTTGACCGTATCCTCCGTCCTCCTCGCCGGCGTCGCCC
TCTTGTCCGCCATGGTGCGTTCTGACACACCCATTTATCCATGCACGGAT
GCAAGTGTCTATCCTACAAATCGATGTCGTGTTCACATTCTGTTATGTCA
CGCTCTTCCTCTCTTTCTTGCTCTATCTTCCCCCCCCCCCCTTTATGACA
CAGTCCGCTGTTAGCGGCAGCGGCCACGTCCAAACCGGCGCCAAGTCCGT
GCTCGTGAAAAAGGGTAGAATCGTGACTGTCACCCAGAGGTTTGTAGCCC
AGAGCTTCAACGTTGGTCGTCGTCTTGTTGATGTTCAGGAGCCTGTCATG
GCTGGGGTACGTTGCAAAAAGAGGGCAGTCGAGGGGTGGGGGGGGGGGAA
GGGCTTGCCCTCGCAGAATTTGTGCCGGACCTGTTGGCATACTCACAGAC
GTGCGATCAGATCGATACATTCGCTATCTCGCCGCCTGAATGAACAAACA
TTACCATTTCTCATTCCTTCCTTTGCTTCCTGCTTTCCCTCCCACCACTC
GCTGTCTCCATCCATCTACTTCTCCACAGCTCACGACTGACCCTGAGGGG
GAGTTTGACTTCGGCTTCGGCCCCTTCTCCTCTACCAACAAAACCAAACG
CAACAAGACGGCCAAAAGCAAGACGGACAAATGGGCGGACGACGTCGGAA
TCACCATCAAGTCGGCCAAGATCCTCCCCAATACGTGGAAGCCTAAGTGA
GTGAAACAGGCGGAAGGGGAGGGAAGAGTGGGGTTGGAGGGAGGAAGCGG
GAGTTCGTAAAACGTATAATTTCTCCTCGGTTTGCCCTGCTCTGATTCTC
AAAGCCTCTTTCCCTCTCCTTCTCCCCTCTCCCTTGTCTTGTCTCCCACA
GGGTGTCTGCGAACATGACCTCGACCGTCGATGGTGACTACGCCATCTTC
GAGCTCCCGCAGGACGGCCTGGACCTGAACAGGGAGTACAAGATCGTCTA
CAAGGTGCGCGTTGGGAGGGGCATCCCCTCTGGTTCCTTCATCGAGCTTC
CGTATAATTTCGATGGTATCTCCTTTGGAGACGACTTTGCTGTGACTGTT
ATTGTCAAGTAATCAAATGTCTTGGCCTGGCTCCGCTCCCTTGTGGAAAA
ATGAGGGTCGAGATGCATGTGTTGCGATCATGATGAAAAATGGTGGCGTG
GCTTTTTTTCGTACATATATGTGTGTAAATCTGTTGTGATGTACATGCGT
ACATCTATCCGTGCGCGGCGTGATCCCTGCTTCGCGTCAGATGTTGTACG
TTTCGCTGTGTGTCATGTGTTTGTGTTTGTGTCTGTCTACGTGTAATTGT
GTGTGTTGGCGTGTAGGTGTGGATGTTTCCTCTTTCAAAGGGAAATATTA
TAAGAAAGACAAAAAGCTACAACACCTGAGTGGCAATCCATTTTTTTGTT
TGGTGGACATAGCCTCAATACGGTGGGGGGTCACGATCCTTGTTTTTTTA
AACACATGACGTTCCCATCGCTGTTGTTGATGCCCTGCTGTTGCACCGGC
AAGATCACCTTTCTAATTTTCTTTCTTCTCTTCCTTGTCGTGTGTGCAGA
CATTCAAAGAGTCAATACACACAGTCAGATGGTTAAATCAATATAAATGA
TTTAAAAATGAATATATGGTAAAGTAGGCGAAGTAGGGGATGAGGAGAGT
ATGAGGAAAATGAACTAGGGCGAGGACAGATCCTTCCGCTACAGATTTAT
GGTCATATAATGTTTGTGTTGGTCTCGTCTTGTTGGATATGTCAGGGGAT
TGGCACGGGACCTTTGAGGGACAGTACACTACGTTTTCTCAGAATGAGTA
TTGATATTTTGGACTCGCAAATGGTTATTGATGACCCGTTTAGATGTTTT
GGTAATTCAAGAGGCTTAACCATTGTCACTATCGAACTCACAAAAGATTC
AATCAATCAATCAATCCACTTTTTCAGCCTATACAACTCATTCTGGCACA
TTTCGTGTGTCATTGACGACTTTAAAGTAATATCTTCACTGTAGGGTTCC
AAAGATTCCTCGAGGCATCGATTTCGGACCCTCTGACGCTCTCGCGGTGG
GGTAGCCCTGCATGGGCTGGATTCTTTCTTCCACTAAGAGCTCACTTGCC
ATGCTTTACACTTCCTGTCCTTCCTCCAACAGCTTGAGGCCTATCAAAGC
AATTGATTTCTTTCTCTCGGATGCCTTTAGTCTGTCCCTTCTTTTCTCTT
TTCTTTCCCCCCCCTTCTGTCTCCTCTGCTTTCTCCGTTCAAGAAGCATC
GCCCTACTTCACTCAAGCACGCAAGCGACGCCGATCTCTGTGCAATTCCA
CTGCACACATCCTTCGTCATCGCCTCTACCTTCCCTTCTTCCTTACGTCT
CTTCCACATTCCCCCCTCCTTTCTTCACGTGCATCCAAGTGCACGTCCTT
GTTGCCGTACACTCTACATACGCATATACAGCTACACGTGCAAGTCACAA
GCAGTACGCAGAATGTTGTTACTTTCGTTCACATCTCCCTGTTTCACCGG
CTGTCTTCCCCCTTCTTGATTTTCTAGGCCATTTCCGCATTTTCCTCTTG
TTGCTTTCTGTCTCATTCTGTCCTCTCTTTACCTCTCTTTTCTTCTCGTT
GCTTCCCTTCTCTTTGCTTCACTTCTATACTCCCTTTTCCCTCTCCTACC
GGTCGTCCCCGAGAATGTTTTGGGCACTCAATTGCTTCAACCCGGCTACA
GCCCCCTGGAAACCTATGGAGGGATTCGGGAGGGAGAGAGGGAGAGAGGG
AGGTCGGAAGAAATGAGAGCTCTGGGAAGGAGTAGGAGTAGGATATACGG
TGGTGTCCGTGACTTACCAGCACTGTAGTCCAGGGCAACCTCGTTCCTGT
CGTTTTATCGTGTGCATATGTATAAATAAATATTTTGGTAGAAACAATCA
AAGTCAAAGCGGAATCAAGCGCCCTCCCTCTCTCCCTCTCTCCCTCCTCC
CTCCCTCGCATCCTCCCTTTATCTCCGTCCGTGACATTACAACCCCTCCC
TCCCTCCCTCCCTTTCCTCCTCCTTCTCTCCTTCCCTTCCCCATCCCCCC
TCATCCCCTTACGTGATGAAGTCCGCGCATTTATCGTGGTGCGAGTCGTC
TTCCCTGGGCC back to topCoding sequence (CDS) from alignment at scaffold_59:34688..38498- >mRNA_10787 ID=mRNA_10787|Name=jgi.p|Nanoce1779_2|611825|organism=Nannochloropsis oceanica|type=CDS|length=2892bp|location=Sequence derived from alignment at scaffold_59:34688..38498- (Nannochloropsis oceanica)
GGTGTCTGCGAACATGACCTCGACCGTCGATGGTGACTACGCCATCTTCG
AGCTCCCGCAGGACGGCCTGGACCTGAACAGGGAGTACAAGATCGTCTAC
AAGGTGCGCGTTGGGAGGGGCATCCCCTCTGGTTCCTTCATCGAGCTTCC
GTATAATTTCGATGGTATCTCCTTTGGAGACGACTTTGCTGTGACTGTTA
TTGTCAAGTAACTCACGACTGACCCTGAGGGGGAGTTTGACTTCGGCTTC
GGCCCCTTCTCCTCTACCAACAAAACCAAACGCAACAAGACGGCCAAAAG
CAAGACGGACAAATGGGCGGACGACGTCGGAATCACCATCAAGTCGGCCA
AGATCCTCCCCAATACGTGGAAGCCTAATCCGCTGTTAGCGGCAGCGGCC
ACGTCCAAACCGGCGCCAAGTCCGTGCTCGTGAAAAAGGGTAGAATCGTG
ACTGTCACCCAGAGGTTTGTAGCCCAGAGCTTCAACGTTGGTCGTCGTCT
TGTTGATGTTCAGGAGCCTGTCATGGCTGGGATGACCGTATCCATACAGA
GTCTACGACTTTTTGGCCCTGTCCGATCCCCTCTTGCCTTGCACACACGC
ACTTATTCTCCTTTCACATCCCACGACAACTCATACACACAGCACCCACT
CTCTCCGATAACAACCATGAAGTTGACCGTATCCTCCGTCCTCCTCGCCG
GCGTCGCCCTCTTGTCCGCCATGGGTGTCTGCGAACATGACCTCGACCGT
CGATGGTGACTACGCCATCTTCGAGCTCCCGCAGGACGGCCTGGACCTGA
ACAGGGAGTACAAGATCGTCTACAAGGTGCGCGTTGGGAGGGGCATCCCC
TCTGGTTCCTTCATCGAGCTTCCGTATAATTTCGATGGTATCTCCTTTGG
AGACGACTTTGCTGTGACTGTTATTGTCAAGTAACTCACGACTGACCCTG
AGGGGGAGTTTGACTTCGGCTTCGGCCCCTTCTCCTCTACCAACAAAACC
AAACGCAACAAGACGGCCAAAAGCAAGACGGACAAATGGGCGGACGACGT
CGGAATCACCATCAAGTCGGCCAAGATCCTCCCCAATACGTGGAAGCCTA
ATCCGCTGTTAGCGGCAGCGGCCACGTCCAAACCGGCGCCAAGTCCGTGC
TCGTGAAAAAGGGTAGAATCGTGACTGTCACCCAGAGGTTTGTAGCCCAG
AGCTTCAACGTTGGTCGTCGTCTTGTTGATGTTCAGGAGCCTGTCATGGC
TGGGATGACCGTATCCATACAGAGTCTACGACTTTTTGGCCCTGTCCGAT
CCCCTCTTGCCTTGCACACACGCACTTATTCTCCTTTCACATCCCACGAC
AACTCATACACACAGCACCCACTCTCTCCGATAACAACCATGAAGTTGAC
CGTATCCTCCGTCCTCCTCGCCGGCGTCGCCCTCTTGTCCGCCATGGGTG
TCTGCGAACATGACCTCGACCGTCGATGGTGACTACGCCATCTTCGAGCT
CCCGCAGGACGGCCTGGACCTGAACAGGGAGTACAAGATCGTCTACAAGG
TGCGCGTTGGGAGGGGCATCCCCTCTGGTTCCTTCATCGAGCTTCCGTAT
AATTTCGATGGTATCTCCTTTGGAGACGACTTTGCTGTGACTGTTATTGT
CAAGTAACTCACGACTGACCCTGAGGGGGAGTTTGACTTCGGCTTCGGCC
CCTTCTCCTCTACCAACAAAACCAAACGCAACAAGACGGCCAAAAGCAAG
ACGGACAAATGGGCGGACGACGTCGGAATCACCATCAAGTCGGCCAAGAT
CCTCCCCAATACGTGGAAGCCTAATCCGCTGTTAGCGGCAGCGGCCACGT
CCAAACCGGCGCCAAGTCCGTGCTCGTGAAAAAGGGTAGAATCGTGACTG
TCACCCAGAGGTTTGTAGCCCAGAGCTTCAACGTTGGTCGTCGTCTTGTT
GATGTTCAGGAGCCTGTCATGGCTGGGATGACCGTATCCATACAGAGTCT
ACGACTTTTTGGCCCTGTCCGATCCCCTCTTGCCTTGCACACACGCACTT
ATTCTCCTTTCACATCCCACGACAACTCATACACACAGCACCCACTCTCT
CCGATAACAACCATGAAGTTGACCGTATCCTCCGTCCTCCTCGCCGGCGT
CGCCCTCTTGTCCGCCATGGGTGTCTGCGAACATGACCTCGACCGTCGAT
GGTGACTACGCCATCTTCGAGCTCCCGCAGGACGGCCTGGACCTGAACAG
GGAGTACAAGATCGTCTACAAGGTGCGCGTTGGGAGGGGCATCCCCTCTG
GTTCCTTCATCGAGCTTCCGTATAATTTCGATGGTATCTCCTTTGGAGAC
GACTTTGCTGTGACTGTTATTGTCAAGTAACTCACGACTGACCCTGAGGG
GGAGTTTGACTTCGGCTTCGGCCCCTTCTCCTCTACCAACAAAACCAAAC
GCAACAAGACGGCCAAAAGCAAGACGGACAAATGGGCGGACGACGTCGGA
ATCACCATCAAGTCGGCCAAGATCCTCCCCAATACGTGGAAGCCTAATCC
GCTGTTAGCGGCAGCGGCCACGTCCAAACCGGCGCCAAGTCCGTGCTCGT
GAAAAAGGGTAGAATCGTGACTGTCACCCAGAGGTTTGTAGCCCAGAGCT
TCAACGTTGGTCGTCGTCTTGTTGATGTTCAGGAGCCTGTCATGGCTGGG
ATGACCGTATCCATACAGAGTCTACGACTTTTTGGCCCTGTCCGATCCCC
TCTTGCCTTGCACACACGCACTTATTCTCCTTTCACATCCCACGACAACT
CATACACACAGCACCCACTCTCTCCGATAACAACCATGAAGTTGACCGTA
TCCTCCGTCCTCCTCGCCGGCGTCGCCCTCTTGTCCGCCATG back to top
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