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Properties
| Property Name | Value |
|---|
| TranscriptId | 554389 |
| Track | FilteredModels2 |
| ProteinId | 554303 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_8 | supercontig | scaffold_8:748301..750489 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4062 ID=mRNA_4062|Name=jgi.p|Nanoce1779_2|554303|organism=Nannochloropsis oceanica|type=mRNA|length=1475bp
ACAGGGTACGTGCTGTGCCGCAACTGCTTCCGACTTCTCCCTTCTCTGTG
CTGCCCGCACCAGCATCCTTCGAGGGTCGCACAATACACGCAAGCCGCCG
CAGAGAACAAGCGAGAGATCGATCTCTCCTTTTGCGACACACCCGTTCGG
CCAACCTCGGACATACAGACATGGGTTTGCCGGGCCACGAGGAGCTTATT
AATGCTGTCAAATTCACGCCGAATGGACGATTGGTCGCCTCGGCCAGCGA
CGACCGGACGGTCCGCATCTGGAACGCTAGCACAGGGTCCTGTGTCAGGA
TACTGCGGGGCCACACGTCCATGGTCCGCAGTCTCGCCGTCATGCCGGAT
GGAAATCGTGTTATTTCCGCTGGCACTGACGGCACTTTAAGGCTGTGGGA
CATTGAGACGGGGCAAAACCTGGCGGTAGTGGGCGGACGTTTGGGCCACG
TGTTGTCCTTGATTGCCTTGCCGGATAGACGATGTGTGGTTTCTGGGGAT
TATGATAGGCACGTTAAAGTTTGGGACCTCTCGGCCTCGACGTCTTTTAT
CGCCAAGGTGGGTGCCTCCACCCATCCCGCTGAAATCCGCGCCATGACCG
TTTTTCCAGGCACAACGCACATCGCTGTCGGTTACATGGGGAATGAAGAA
TGTACAGAGATTAGGGTGTGGGATGCTGTAGGACAAGGAAGGATAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAACGGAGG
GAGGGAAGGTGGTGGAGGTGCCCCCGTTGTGGAGTGTGCCTGGGCATGAT
GACACGATAGTGAGCTTGGGGGTGATTGGCGGGGAGGGATTGGTGTCGTC
GGGGTATGATCGGACGGTACGAGTCTGGACCCCATCCTCCCCTTTAGCAC
GTGCAACATGGTCCACACCAAAGGAGAAGGAAGAAGCCAGCCTCATCATC
CATTCGGGACAGAACATCGCCATGGCAGCCGTAGCTTGGGAGGATGGTAG
GGGGCTGGCCTACGGGTGTGATGACGGGAGCCTTCACATTTGGGACCTGA
AGCGACGGCGTGAGGCACTGAGCCACCCACAACGGCATCCAGATGGGGTA
AAGGCCCTCGATATCTCCTACGATGGCAACACTTTGTGCTCTGCGGGTGC
TGACCATGCCATTCGTCTTCTGCAAACAGGCGCGACCTGTGACGCTGCTC
CCTAAGGGGGATGTAGTTAGTACTGCATCTGCGCATTAAACCCAACGGAA
TATGGCAGAGGGGCGAGCATTGAAAAAGAACTGTCGAGCCTGTACATAGG
TAGTAGAGAGCGGTGTTGTGGCATTAAAAAAAGCGACACGCAGACATACA
GACATGCACAAACAAAGGTTGGCAAGTTTATGTGCCTGGACAGGCTTGCT
TGGCTTTTCGTCAGTGAGTTTCTCGGATTCGAGGTGTTGGATCATGTCGC
CTCGTAGGCGTCGTTTGCAAGATGG back to topprotein sequence of jgi.p|Nanoce1779_2|554303 >mRNA_4062-protein ID=mRNA_4062-protein|Name=jgi.p|Nanoce1779_2|554303|organism=Nannochloropsis oceanica|type=polypeptide|length=345bp
MGLPGHEELINAVKFTPNGRLVASASDDRTVRIWNASTGSCVRILRGHTS
MVRSLAVMPDGNRVISAGTDGTLRLWDIETGQNLAVVGGRLGHVLSLIAL
PDRRCVVSGDYDRHVKVWDLSASTSFIAKVGASTHPAEIRAMTVFPGTTH
IAVGYMGNEECTEIRVWDAVGQGRIGGGGGGGGGGGGGGGGTEGGKVVEV
PPLWSVPGHDDTIVSLGVIGGEGLVSSGYDRTVRVWTPSSPLARATWSTP
KEKEEASLIIHSGQNIAMAAVAWEDGRGLAYGCDDGSLHIWDLKRRREAL
SHPQRHPDGVKALDISYDGNTLCSAGADHAIRLLQTGATCDAAP* back to topmRNA from alignment at scaffold_8:748301..750489- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4062 ID=mRNA_4062|Name=jgi.p|Nanoce1779_2|554303|organism=Nannochloropsis oceanica|type=mRNA|length=2189bp|location=Sequence derived from alignment at scaffold_8:748301..750489- (Nannochloropsis oceanica)
ACAGGGTACGTGCTGTGCCGCAACTGCTTCCGACTTCTCCCTTCTCTGTG
CTGCCCGCACCAGCATCCTTCGAGGGTCGCACAATACACGCAAGCCGCCG
CAGAGAACAAGCGAGAGATCGATCTCTCCTTTTGCGACACACCCGTTCGG
CCAACCTCGGACATACAGACATGGGTTTGCCGGGCCACGAGGAGCTTATT
AATGCTGTCAAATTCACGCCGAATGGACGATTGGTCGCCTCGGCCAGCGA
CGACCGGACGGTATGTGCTATTGCATCAATGGAGGGAGGGGTGATGATTA
CGTGTGGCAAGTTCCATGTTGGGAAGGAAGATACAAAGAAAGGCAGGAAT
GTGGGTAAAACAGAAGTATTTGGTGTCATGCTTAACCACGAGGGTGGTGG
AGTATATTCGCTTTGACAGCCCTCTTGCTTGGCGCTGTGTGTGTCGCCAT
CTCTCTCCACATGTTGAAGCGCAGGACTCCCCTGCTCATGAGCACACAGC
ATACACACAAACGAGCACCCTCCCCACTCTATCGCATCGACCCATTAGGT
CCGCATCTGGAACGCTAGCACAGGGTCCTGTGTCAGGATACTGCGGGGCC
ACACGTCCATGGTCCGCAGTCTCGCCGTCATGCCGGATGGAAATCGTGTT
ATTTCCGCTGGCACTGACGGCACTTTAAGGCTGTGGGACATTGAGACGGG
GCAAAACCTGGCGGTAGTGGGCGGACGTTTGGGCCACGTGTTGTCCTTGA
TTGCCTTGCCGGATAGACGATGTGTGGTTTCTGGGGATTATGATAGGGTA
GGTGCGTGTGAGACGCAAGGAAATGTGAAGGAAGTTTGGAAGCTGTATGG
ACCTCTCTCTCCTTTTTCCTTCGCCGTTCGTATCGTGGTTACTTATCATC
TTTCACTGTTTCTTATCTGCTTGTCCGACCCCACAGCACGTTAAAGTTTG
GGACCTCTCGGCCTCGACGTCTTTTATCGCCAAGGTGGGTGCCTCCACCC
ATCCCGCTGAAATCCGCGCCATGACCGTTTTTCCAGGCACAACGCACATC
GCTGTCGGTTACATGGGGAATGAAGAATGTACAGAGATTAGGGTGTGGGA
TGCTGTAGGACAAGGAAGGATAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAACGGAGGGAGGGAAGGTGGTGGAGGTGCCC
CCGTTGTGGAGTGTGCCTGGGCATGATGACACGATAGTGAGCTTGGGGGT
GATTGGCGGGGAGGGATTGGTGTCGTCGGGGTATGATCGGACGGTACGTC
TAGAACAAGAAAGAGCCGATCGGGTTTGCGAGATTGTTGACTCGGATATA
GAAGGTGCACGACAATTGGTATATATATCAGTGTAGATATCCAATTTGGA
CTCAGAGAATTACATAAAACAGGTACGAGTCTGGACCCCATCCTCCCCTT
TAGCACGTGCAACATGGTCCACACCAAAGGAGAAGGAAGAAGCCAGCCTC
ATCATCCATTCGGGACAGAACATCGCCATGGCAGCCGTAGCTTGGGAGGA
TGGTAGGGGGCTGGCCTACGGGTGTGATGGTAAGTCCGCCCTTTCTCCGG
AAGATTATCAATACTAGAATAATTCTTCATTTGCGTGCTTTCGGACTCTA
CGATTTCTTGTTCTTTGTGAGTAATTCGCCACCAAGCTTTATTTGCTTAC
TTACCCGACATCCACACCCCAAAAAATACTAACACAGACGGGAGCCTTCA
CATTTGGGACCTGAAGCGACGGCGTGAGGCACTGAGCCACCCACAACGGC
ATCCAGATGGGGTAAAGGCCCTCGATATCTCCTACGATGGCAACACTTTG
TGCTCTGCGGGTGCTGACCATGCCATTCGTCTTCTGCAAACAGGCGCGAC
CTGTGACGCTGCTCCCTAAGGGGGATGTAGTTAGTACTGCATCTGCGCAT
TAAACCCAACGGAATATGGCAGAGGGGCGAGCATTGAAAAAGAACTGTCG
AGCCTGTACATAGGTAGTAGAGAGCGGTGTTGTGGCATTAAAAAAAGCGA
CACGCAGACATACAGACATGCACAAACAAAGGTTGGCAAGTTTATGTGCC
TGGACAGGCTTGCTTGGCTTTTCGTCAGTGAGTTTCTCGGATTCGAGGTG
TTGGATCATGTCGCCTCGTAGGCGTCGTTTGCAAGATGG back to topCoding sequence (CDS) from alignment at scaffold_8:748301..750489- >mRNA_4062 ID=mRNA_4062|Name=jgi.p|Nanoce1779_2|554303|organism=Nannochloropsis oceanica|type=CDS|length=5175bp|location=Sequence derived from alignment at scaffold_8:748301..750489- (Nannochloropsis oceanica)
ACGGGAGCCTTCACATTTGGGACCTGAAGCGACGGCGTGAGGCACTGAGC
CACCCACAACGGCATCCAGATGGGGTAAAGGCCCTCGATATCTCCTACGA
TGGCAACACTTTGTGCTCTGCGGGTGCTGACCATGCCATTCGTCTTCTGC
AAACAGGCGCGACCTGTGACGCTGCTCCCTAAGTACGAGTCTGGACCCCA
TCCTCCCCTTTAGCACGTGCAACATGGTCCACACCAAAGGAGAAGGAAGA
AGCCAGCCTCATCATCCATTCGGGACAGAACATCGCCATGGCAGCCGTAG
CTTGGGAGGATGGTAGGGGGCTGGCCTACGGGTGTGATGCACGTTAAAGT
TTGGGACCTCTCGGCCTCGACGTCTTTTATCGCCAAGGTGGGTGCCTCCA
CCCATCCCGCTGAAATCCGCGCCATGACCGTTTTTCCAGGCACAACGCAC
ATCGCTGTCGGTTACATGGGGAATGAAGAATGTACAGAGATTAGGGTGTG
GGATGCTGTAGGACAAGGAAGGATAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAACGGAGGGAGGGAAGGTGGTGGAGGTG
CCCCCGTTGTGGAGTGTGCCTGGGCATGATGACACGATAGTGAGCTTGGG
GGTGATTGGCGGGGAGGGATTGGTGTCGTCGGGGTATGATCGGACGGTCC
GCATCTGGAACGCTAGCACAGGGTCCTGTGTCAGGATACTGCGGGGCCAC
ACGTCCATGGTCCGCAGTCTCGCCGTCATGCCGGATGGAAATCGTGTTAT
TTCCGCTGGCACTGACGGCACTTTAAGGCTGTGGGACATTGAGACGGGGC
AAAACCTGGCGGTAGTGGGCGGACGTTTGGGCCACGTGTTGTCCTTGATT
GCCTTGCCGGATAGACGATGTGTGGTTTCTGGGGATTATGATAGGATGGG
TTTGCCGGGCCACGAGGAGCTTATTAATGCTGTCAAATTCACGCCGAATG
GACGATTGGTCGCCTCGGCCAGCGACGACCGGACGACGGGAGCCTTCACA
TTTGGGACCTGAAGCGACGGCGTGAGGCACTGAGCCACCCACAACGGCAT
CCAGATGGGGTAAAGGCCCTCGATATCTCCTACGATGGCAACACTTTGTG
CTCTGCGGGTGCTGACCATGCCATTCGTCTTCTGCAAACAGGCGCGACCT
GTGACGCTGCTCCCTAAGTACGAGTCTGGACCCCATCCTCCCCTTTAGCA
CGTGCAACATGGTCCACACCAAAGGAGAAGGAAGAAGCCAGCCTCATCAT
CCATTCGGGACAGAACATCGCCATGGCAGCCGTAGCTTGGGAGGATGGTA
GGGGGCTGGCCTACGGGTGTGATGCACGTTAAAGTTTGGGACCTCTCGGC
CTCGACGTCTTTTATCGCCAAGGTGGGTGCCTCCACCCATCCCGCTGAAA
TCCGCGCCATGACCGTTTTTCCAGGCACAACGCACATCGCTGTCGGTTAC
ATGGGGAATGAAGAATGTACAGAGATTAGGGTGTGGGATGCTGTAGGACA
AGGAAGGATAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAACGGAGGGAGGGAAGGTGGTGGAGGTGCCCCCGTTGTGGAGT
GTGCCTGGGCATGATGACACGATAGTGAGCTTGGGGGTGATTGGCGGGGA
GGGATTGGTGTCGTCGGGGTATGATCGGACGGTCCGCATCTGGAACGCTA
GCACAGGGTCCTGTGTCAGGATACTGCGGGGCCACACGTCCATGGTCCGC
AGTCTCGCCGTCATGCCGGATGGAAATCGTGTTATTTCCGCTGGCACTGA
CGGCACTTTAAGGCTGTGGGACATTGAGACGGGGCAAAACCTGGCGGTAG
TGGGCGGACGTTTGGGCCACGTGTTGTCCTTGATTGCCTTGCCGGATAGA
CGATGTGTGGTTTCTGGGGATTATGATAGGATGGGTTTGCCGGGCCACGA
GGAGCTTATTAATGCTGTCAAATTCACGCCGAATGGACGATTGGTCGCCT
CGGCCAGCGACGACCGGACGACGGGAGCCTTCACATTTGGGACCTGAAGC
GACGGCGTGAGGCACTGAGCCACCCACAACGGCATCCAGATGGGGTAAAG
GCCCTCGATATCTCCTACGATGGCAACACTTTGTGCTCTGCGGGTGCTGA
CCATGCCATTCGTCTTCTGCAAACAGGCGCGACCTGTGACGCTGCTCCCT
AAGTACGAGTCTGGACCCCATCCTCCCCTTTAGCACGTGCAACATGGTCC
ACACCAAAGGAGAAGGAAGAAGCCAGCCTCATCATCCATTCGGGACAGAA
CATCGCCATGGCAGCCGTAGCTTGGGAGGATGGTAGGGGGCTGGCCTACG
GGTGTGATGCACGTTAAAGTTTGGGACCTCTCGGCCTCGACGTCTTTTAT
CGCCAAGGTGGGTGCCTCCACCCATCCCGCTGAAATCCGCGCCATGACCG
TTTTTCCAGGCACAACGCACATCGCTGTCGGTTACATGGGGAATGAAGAA
TGTACAGAGATTAGGGTGTGGGATGCTGTAGGACAAGGAAGGATAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAACGGAGG
GAGGGAAGGTGGTGGAGGTGCCCCCGTTGTGGAGTGTGCCTGGGCATGAT
GACACGATAGTGAGCTTGGGGGTGATTGGCGGGGAGGGATTGGTGTCGTC
GGGGTATGATCGGACGGTCCGCATCTGGAACGCTAGCACAGGGTCCTGTG
TCAGGATACTGCGGGGCCACACGTCCATGGTCCGCAGTCTCGCCGTCATG
CCGGATGGAAATCGTGTTATTTCCGCTGGCACTGACGGCACTTTAAGGCT
GTGGGACATTGAGACGGGGCAAAACCTGGCGGTAGTGGGCGGACGTTTGG
GCCACGTGTTGTCCTTGATTGCCTTGCCGGATAGACGATGTGTGGTTTCT
GGGGATTATGATAGGATGGGTTTGCCGGGCCACGAGGAGCTTATTAATGC
TGTCAAATTCACGCCGAATGGACGATTGGTCGCCTCGGCCAGCGACGACC
GGACGACGGGAGCCTTCACATTTGGGACCTGAAGCGACGGCGTGAGGCAC
TGAGCCACCCACAACGGCATCCAGATGGGGTAAAGGCCCTCGATATCTCC
TACGATGGCAACACTTTGTGCTCTGCGGGTGCTGACCATGCCATTCGTCT
TCTGCAAACAGGCGCGACCTGTGACGCTGCTCCCTAAGTACGAGTCTGGA
CCCCATCCTCCCCTTTAGCACGTGCAACATGGTCCACACCAAAGGAGAAG
GAAGAAGCCAGCCTCATCATCCATTCGGGACAGAACATCGCCATGGCAGC
CGTAGCTTGGGAGGATGGTAGGGGGCTGGCCTACGGGTGTGATGCACGTT
AAAGTTTGGGACCTCTCGGCCTCGACGTCTTTTATCGCCAAGGTGGGTGC
CTCCACCCATCCCGCTGAAATCCGCGCCATGACCGTTTTTCCAGGCACAA
CGCACATCGCTGTCGGTTACATGGGGAATGAAGAATGTACAGAGATTAGG
GTGTGGGATGCTGTAGGACAAGGAAGGATAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAACGGAGGGAGGGAAGGTGGTGG
AGGTGCCCCCGTTGTGGAGTGTGCCTGGGCATGATGACACGATAGTGAGC
TTGGGGGTGATTGGCGGGGAGGGATTGGTGTCGTCGGGGTATGATCGGAC
GGTCCGCATCTGGAACGCTAGCACAGGGTCCTGTGTCAGGATACTGCGGG
GCCACACGTCCATGGTCCGCAGTCTCGCCGTCATGCCGGATGGAAATCGT
GTTATTTCCGCTGGCACTGACGGCACTTTAAGGCTGTGGGACATTGAGAC
GGGGCAAAACCTGGCGGTAGTGGGCGGACGTTTGGGCCACGTGTTGTCCT
TGATTGCCTTGCCGGATAGACGATGTGTGGTTTCTGGGGATTATGATAGG
ATGGGTTTGCCGGGCCACGAGGAGCTTATTAATGCTGTCAAATTCACGCC
GAATGGACGATTGGTCGCCTCGGCCAGCGACGACCGGACGACGGGAGCCT
TCACATTTGGGACCTGAAGCGACGGCGTGAGGCACTGAGCCACCCACAAC
GGCATCCAGATGGGGTAAAGGCCCTCGATATCTCCTACGATGGCAACACT
TTGTGCTCTGCGGGTGCTGACCATGCCATTCGTCTTCTGCAAACAGGCGC
GACCTGTGACGCTGCTCCCTAAGTACGAGTCTGGACCCCATCCTCCCCTT
TAGCACGTGCAACATGGTCCACACCAAAGGAGAAGGAAGAAGCCAGCCTC
ATCATCCATTCGGGACAGAACATCGCCATGGCAGCCGTAGCTTGGGAGGA
TGGTAGGGGGCTGGCCTACGGGTGTGATGCACGTTAAAGTTTGGGACCTC
TCGGCCTCGACGTCTTTTATCGCCAAGGTGGGTGCCTCCACCCATCCCGC
TGAAATCCGCGCCATGACCGTTTTTCCAGGCACAACGCACATCGCTGTCG
GTTACATGGGGAATGAAGAATGTACAGAGATTAGGGTGTGGGATGCTGTA
GGACAAGGAAGGATAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAACGGAGGGAGGGAAGGTGGTGGAGGTGCCCCCGTTGT
GGAGTGTGCCTGGGCATGATGACACGATAGTGAGCTTGGGGGTGATTGGC
GGGGAGGGATTGGTGTCGTCGGGGTATGATCGGACGGTCCGCATCTGGAA
CGCTAGCACAGGGTCCTGTGTCAGGATACTGCGGGGCCACACGTCCATGG
TCCGCAGTCTCGCCGTCATGCCGGATGGAAATCGTGTTATTTCCGCTGGC
ACTGACGGCACTTTAAGGCTGTGGGACATTGAGACGGGGCAAAACCTGGC
GGTAGTGGGCGGACGTTTGGGCCACGTGTTGTCCTTGATTGCCTTGCCGG
ATAGACGATGTGTGGTTTCTGGGGATTATGATAGGATGGGTTTGCCGGGC
CACGAGGAGCTTATTAATGCTGTCAAATTCACGCCGAATGGACGATTGGT
CGCCTCGGCCAGCGACGACCGGACG back to top
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