EWM20414.1, cds10258 (CDS) Nannochloropsis gaditana

Overview
NameEWM20414.1
Unique Namecds10258
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037270.1:5696..5949 -
Alignment locationKK037270.1:5475..5576 -
Alignment locationKK037270.1:4971..5236 -
Alignment locationKK037270.1:4497..4681 -
Alignment locationKK037270.1:4155..4343 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20414.1
Productheme oxygenase
Orig transcript idgnl|cribi|Naga_100502g2.8983.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037270.1supercontigKK037270.1:5696..5949 -
KK037270.1supercontigKK037270.1:5475..5576 -
KK037270.1supercontigKK037270.1:4971..5236 -
KK037270.1supercontigKK037270.1:4497..4681 -
KK037270.1supercontigKK037270.1:4155..4343 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009056catabolic process
GO:0055114oxidation-reduction process
GO:0006788heme oxidation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004392heme oxygenase (decyclizing) activity
Vocabulary: INTERPRO
TermDefinition
IPR016053Haem_Oase-like
IPR016084Haem_Oase-like_multi-hlx
IPR002051Haem_Oase
Homology
BLAST of EWM20414.1 vs. NCBI_GenBank
Match: gi|585100004|gb|EWM20414.1| (heme oxygenase [Nannochloropsis gaditana])

HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
Query:    1 MRWTLPPVPRRLPIASAVNTSCCVPLKGKIRRDLRVPGPFSLPIHFSSLESFKVEKGIGNEVMASGAPDGHDEVPLSIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILRRLTTQCLLPKTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKGRRKLVVLGCLLLVAVILVVTMVGGAMSCAFQTK 331
            MRWTLPPVPRRLPIASAVNTSCCVPLKGKIRRDLRVPGPFSLPIHFSSLESFKVEKGIGNEVMASGAPDGHDEVPLSIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILRRLTTQCLLPKTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKGRRKLVVLGCLLLVAVILVVTMVGGAMSCAFQTK
Sbjct:    1 MRWTLPPVPRRLPIASAVNTSCCVPLKGKIRRDLRVPGPFSLPIHFSSLESFKVEKGIGNEVMASGAPDGHDEVPLSIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILRRLTTQCLLPKTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKGRRKLVVLGCLLLVAVILVVTMVGGAMSCAFQTK 331          
BLAST of EWM20414.1 vs. NCBI_GenBank
Match: gi|553188646|ref|XP_005854834.1| (heme oxygenase, partial [Nannochloropsis gaditana CCMP526] >gi|422294227|gb|EKU21527.1| heme oxygenase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 341.658 bits (875), Expect = 9.299e-114
Identity = 172/207 (83.09%), Postives = 173/207 (83.57%), Query Frame = 0
Query:   63 MASGAPDGHDEVPLSIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILRRLTTQCLLPKTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQ 269
            MASGAPDGHDEVPLSIAMRKATR                                  YRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILRRLTTQCLLPKTP+TNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQ
Sbjct:    1 MASGAPDGHDEVPLSIAMRKATR----------------------------------YRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILRRLTTQCLLPKTPMTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQ 173          
BLAST of EWM20414.1 vs. NCBI_GenBank
Match: gi|1108485237|emb|CRK86965.1| (CLUMA_CG000781, isoform A [Clunio marinus])

HSP 1 Score: 142.895 bits (359), Expect = 5.797e-37
Identity = 93/253 (36.76%), Postives = 135/253 (53.36%), Query Frame = 0
Query:   76 LSIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQIL--RRLTTQCLLPKTPVTNKDPDA---GLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKGRRKLV--VLGCLLLV--AVILVVTM 319
            L+  MR ATR+IH+ SDALVN KL +A     ++AD + +FY +++ LE  V         P   L  +Y   RT+ FE+D++F+ +G   K + +I E+V+ YL  L      +P LL  YVYH+YM LLSGGQIL  +R      + K      D D    G  L SF      E+K   R  +D +      FN   RQA +DES ++F +NNE+++S     +  +K +   +GCLLLV  ++ L V M
Sbjct:   26 LTKEMRIATREIHKLSDALVNAKLAFALNNSEVWADGLLVFYEVFKFLEENV---------PQDILPVEY--HRTQQFENDLEFY-KGNDWKNEYKIRESVQKYLSHLNEIQERNPRLLIAYVYHLYMGLLSGGQILAKKRRIANKFMQKFNEQKDDTDEIAPGSHLTSFPNKSIFELKNNFRQNIDEVSSD---FNENLRQALIDESHKVFELNNEIIKSVEGVEEQLKKNLRNFIGCLLLVIFSLYLFVKM 263          
BLAST of EWM20414.1 vs. NCBI_GenBank
Match: gi|939258637|ref|XP_014249133.1| (PREDICTED: heme oxygenase 1 [Cimex lectularius])

HSP 1 Score: 140.198 bits (352), Expect = 8.431e-36
Identity = 84/248 (33.87%), Postives = 140/248 (56.45%), Query Frame = 0
Query:   74 VPLSIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLE-SLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILRRLTTQCLLPKTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKG-RRKLVVLGCLLLVAVILVVTM 319
            +P +  +R AT++IH  SD+LVN KL +A +   ++A+ + +FY I+R LE ++    G P  + F   +R     RT AFESD++F+  G   + +  I E+V +YL  L    A +P LL  YVYH+YM LLSGGQIL +   + LL K   TNK+ + G A+  F       +K+ I   ++++      F+++ + A + ES R+F +NNE+V S + +     RK ++  C+L+    +++ +
Sbjct:   49 IPFNRQLRNATKEIHSISDSLVNAKLAFAMSDNDIWAEGLLVFYEIFRYLEEAMERHCGEPLGEMFIDGMR-----RTEAFESDLNFY-LGDNWRRNYTIRESVGNYLAHLRKLEADNPNLLIAYVYHLYMGLLSGGQILMK--KRSLLEKVNATNKEKE-GAAVTDFSNLSIFNLKKEI---INKINSLAEYFDNETKDAIISESKRVFELNNELVHSIKGTNSVLLRKFIIAICVLIFCYCILIKL 284          
BLAST of EWM20414.1 vs. NCBI_GenBank
Match: gi|817218037|ref|XP_012284901.1| (PREDICTED: heme oxygenase [Orussus abietinus])

HSP 1 Score: 136.346 bits (342), Expect = 8.950e-35
Identity = 89/254 (35.04%), Postives = 140/254 (55.12%), Query Frame = 0
Query:   75 PLSIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIP-EAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILR--RLTTQCLLPKTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKGRRKLVVLGCLLLVAVILVVTMVGGAMS 325
              S  MR+ATR+IH  SDALVN KLV  F+  +++AD + +FY I+R LE  ++      +  F    R   L+RT AFE D++F+   G +K  +  P E+V  YL RL     TDP LL  Y+YH+YM LLSGG ILR  R   Q  LP   +     ++G  +  F      E+K  +R+T++R+ +T    +   R   ++ES  ++ +NNE++RS     KG   +V+   +  ++++++  +V  A+S
Sbjct:    8 AFSQKMRRATREIHAVSDALVNAKLVLGFSDNAVWADGLLVFYEIFRFLEGAMVRLKDTKVGLF----RIPALQRTEAFEQDLEFYLGNGWKK--NYAPRESVIKYLMRLREVEDTDPMLLMAYIYHLYMGLLSGGIILRKKRQFIQKFLPNKSIK---SNSGDKITDFGDANIFELKSELRSTLNRIAET---LDEDTRNKLIEESGIVYTLNNEIIRSV----KGANTVVIKKAIYFISILILSFLVFLAVS 245          
BLAST of EWM20414.1 vs. NCBI_GenBank
Match: gi|170042113|ref|XP_001848782.1| (heme oxygenase 1 [Culex quinquefasciatus] >gi|167865650|gb|EDS29033.1| heme oxygenase 1 [Culex quinquefasciatus])

HSP 1 Score: 135.191 bits (339), Expect = 2.897e-34
Identity = 87/256 (33.98%), Postives = 131/256 (51.17%), Query Frame = 0
Query:   63 MASGAPDGHDEVPLSIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQIL--RRLTTQCLLPKTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKGRRKLVVLGCLLLVAVILV 316
            MA+        V  + AMR ATR+IH  SD LVN KL +A    +++A+ + +FY I++ LE  V     P            +  RT  FE D+ F+  G   K   +  + V  YL+ LE     +P LL  YVYH+YM LLSGGQIL  RR  T+   P    T  +P+ G AL +FE     E+K+ +R+ +D   K G   + + RQ  ++ES R+F +NN ++R+ +   +   K ++   LL++    V
Sbjct:    1 MAASTTTTEKTVSFTKAMRVATREIHNVSDGLVNAKLAFALYDSAVWAEGLLVFYEIFKFLEQHVAHDFLPE-----------EFHRTEQFEQDLAFYL-GADWKAKYQPRKEVCDYLKHLEQIERENPNLLVAYVYHLYMGLLSGGQILQKRRNITRKFNP--FATAGEPNRGAALTTFEEHSIFELKQKMRSNID---KFGESLDEETRQQMMEESRRVFELNNRIIRTVQGVNRANVKTLIYVALLMMIYFAV 239          
BLAST of EWM20414.1 vs. NCBI_GenBank
Match: gi|1101347848|ref|XP_018899774.1| (PREDICTED: heme oxygenase isoform X1 [Bemisia tabaci] >gi|1101347850|ref|XP_018899775.1| PREDICTED: heme oxygenase isoform X1 [Bemisia tabaci] >gi|1101347852|ref|XP_018899776.1| PREDICTED: heme oxygenase isoform X1 [Bemisia tabaci])

HSP 1 Score: 134.035 bits (336), Expect = 8.215e-34
Identity = 84/243 (34.57%), Postives = 134/243 (55.14%), Query Frame = 0
Query:   77 SIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILR--RLTTQCLLPKTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKGRRKLVVLGCLLLVAVILVV 317
            S+ MRKAT+ +H  SDALVN KL  A +  +++AD + +FY ++R LE+ + +    S+  F        L RT AFE D+ ++  G    +  E  E+V  YL  L     T+P LL  Y+YH+YM LLSGGQILR  R+    L   T     +P  G ++  F      ++K+ +RAT+D +  T    + + +   L+ES R+F +NNE+++S R    G   +V+L  L ++ V++++
Sbjct:   14 SLQMRKATKDVHAVSDALVNAKLFLALSNNAVWADGLLVFYEVFRLLENAMTTLKGSSVHQFNI----EGLARTEAFELDLAYY-LGVDWTKTYEPRESVVKYLMHLRHLEKTEPILLVAYIYHLYMGLLSGGQILRKKRIMASKLNFFTKTNGSNPIKGYSVTDFGRHSLYQLKQKLRATLDELALT---LDDETKLKLLEESRRVFLLNNEIIKSVR----GTTTVVLLKLLFILVVVVIL 244          
BLAST of EWM20414.1 vs. NCBI_GenBank
Match: gi|568248753|gb|ETN58590.1| (heme oxygenase 1 [Anopheles darlingi])

HSP 1 Score: 133.265 bits (334), Expect = 1.439e-33
Identity = 85/248 (34.27%), Postives = 130/248 (52.42%), Query Frame = 0
Query:   74 VPLSIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQIL--RRLTTQCLLP--KTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKGRRKLVVLGCLLLVAVILVV 317
            VP S  +R ATR IH  SDALVN KL +A     ++A+ + +FY +++ LE  V     P            ++ RT  F+ D+ ++   G E+     PE V++YL+ L    A +P LL  YVYH+YM LLSGGQIL  RR   + + P  +     +    G +L +FE     E+K+ +R  VD     G   + + RQ  LDES ++F +NN ++R+   +  GR  + +LG +  V + L+V
Sbjct:    7 VPFSKQLRIATRDIHNVSDALVNAKLAFALYDNKVWAEGLLIFYDVFKHLEQRVPHDFLPP-----------EIHRTAQFQQDLQYYLGDGWEQRHTPRPE-VRAYLQHLNEIEAENPNLLLAYVYHLYMGLLSGGQILQKRRSLGKRINPFRRAAANGEQSVQGASLTTFEDHTIYELKQRLRKVVDEF---GARLDDETRQRMLDESRKVFELNNTIIRTVEGT--GRANVRILGYIGAVIMALIV 237          
BLAST of EWM20414.1 vs. NCBI_GenBank
Match: gi|307203422|gb|EFN82497.1| (Heme oxygenase 2 [Harpegnathos saltator])

HSP 1 Score: 133.265 bits (334), Expect = 2.022e-33
Identity = 82/241 (34.02%), Postives = 133/241 (55.19%), Query Frame = 0
Query:   80 MRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILRRLTTQCLLPKTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKGRRKLV-VLGCLLLVAVILVVTM 319
            M KATR IH  SDALVN KL + F   S++AD + +FY ++R LE  ++   +  +     LL   +L+RT AFE D+D H  G   +++    ++V  YL RL     TDP LL  Y+YH+YM LLSGG ILR+   + L+ K  +    P  G  + SF      ++K  +R +++R+ +T    +   +   ++ES  +F +NNE+V+S +       K+   +G ++L+  +LV+ +
Sbjct:   12 MAKATRGIHAISDALVNAKLAFGFLDDSVWADGLLVFYEVFRYLEGAMIRLKNTKI----GLLPLSELQRTEAFEQDLD-HYLGKGWRKNYSPRDSVAKYLMRLREVEDTDPTLLMAYIYHLYMGLLSGGMILRK--KRQLMQKLSLFKSSPSIGNNVTSFGQNSIFQLKRDLRESMNRIAET---LDEDTKNKLIEESKIVFELNNEIVKSVQTGTHVFEKIFYFIGQIVLIIFVLVIAI 242          
BLAST of EWM20414.1 vs. NCBI_GenBank
Match: gi|242017138|ref|XP_002429049.1| (Heme oxygenase, putative [Pediculus humanus corporis] >gi|212513904|gb|EEB16311.1| Heme oxygenase, putative [Pediculus humanus corporis])

HSP 1 Score: 131.724 bits (330), Expect = 5.491e-33
Identity = 78/251 (31.08%), Postives = 141/251 (56.18%), Query Frame = 0
Query:   72 DEVPLSIAMRKATRKIHRESDALVNFKLVYAFTYPSLYADAIGLFYPIYRKLESLVMSSGSPSLQPFATLLRQYKLERTRAFESDMDFHSRGGTEKEDDEIPEAVKSYLERLESCAATDPELLAVYVYHMYMALLSGGQILRRLTTQCLLPKTPVTNKDPDAGLALYSFEGGKTQEIKEAIRATVDRMEKTGVVFNSQRRQAFLDESIRLFHMNNEVVRSFRPSRKGRRKLVVLGCLLL---VAVILVVTM 319
            DE+  ++ MRKA +K+H  +D++VN K V+A    S+++ A+ LFY +++ LE  +  + +  L      L    + RT AFE+D+ F   G   KE+  + ++VK+Y++ LE+   TDP+LL  YVYH+YM LLSGGQIL++        +  +T +    G A+ +FE  K  ++K  ++  ++ + K     +  +++  + ESI++F +N  ++ +     KG + + +    LL   +A I+ +TM
Sbjct:    3 DEL-FTVTMRKAVKKVHAITDSMVNAKFVFALNDDSVWSQALLLFYEVFKFLEIQMKENSNGYLGS----LYSEDMSRTEAFENDLKFF-LGDNWKENYVLDKSVKNYIQHLETLTKTDPDLLMAYVYHLYMGLLSGGQILQKKRE----FQAKITGRKDKLGTAVTTFENVKISDVKANLKNKINEIAKN---LDENKKELLIKESIKVFELNMTLIEAV----KGTKYVAIKNIFLLFSFLAPIIGITM 236          
The following BLAST results are available for this feature:
BLAST of EWM20414.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100004|gb|EWM20414.1|0.000e+0100.00heme oxygenase [Nannochloropsis gaditana][more]
gi|553188646|ref|XP_005854834.1|9.299e-11483.09heme oxygenase, partial [Nannochloropsis gaditana ... [more]
gi|1108485237|emb|CRK86965.1|5.797e-3736.76CLUMA_CG000781, isoform A [Clunio marinus][more]
gi|939258637|ref|XP_014249133.1|8.431e-3633.87PREDICTED: heme oxygenase 1 [Cimex lectularius][more]
gi|817218037|ref|XP_012284901.1|8.950e-3535.04PREDICTED: heme oxygenase [Orussus abietinus][more]
gi|170042113|ref|XP_001848782.1|2.897e-3433.98heme oxygenase 1 [Culex quinquefasciatus] >gi|1678... [more]
gi|1101347848|ref|XP_018899774.1|8.215e-3434.57PREDICTED: heme oxygenase isoform X1 [Bemisia taba... [more]
gi|568248753|gb|ETN58590.1|1.439e-3334.27heme oxygenase 1 [Anopheles darlingi][more]
gi|307203422|gb|EFN82497.1|2.022e-3334.02Heme oxygenase 2 [Harpegnathos saltator][more]
gi|242017138|ref|XP_002429049.1|5.491e-3331.08Heme oxygenase, putative [Pediculus humanus corpor... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10289rna10289Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications