EWM20438.1, cds10235 (CDS) Nannochloropsis gaditana

Overview
NameEWM20438.1
Unique Namecds10235
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037268.1:28724..28999 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20438.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101668g1.3159.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037268.1supercontigKK037268.1:28724..28999 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20438.1 vs. NCBI_GenBank
Match: gi|585100054|gb|EWM20438.1| (hypothetical protein Naga_101668g1 [Nannochloropsis gaditana])

HSP 1 Score: 182.185 bits (461), Expect = 3.810e-58
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0 
Query:    1 MLGPTRLKHRVLSSLCEGDDRMWEAFVSISCAEWEEAGKEGEGEGGAEEGRKRLVFRKLREQGVDPRIYFASCEEKFDAGVTGEESECKRK 91
            MLGPTRLKHRVLSSLCEGDDRMWEAFVSISCAEWEEAGKEGEGEGGAEEGRKRLVFRKLREQGVDPRIYFASCEEKFDAGVTGEESECKRK
Sbjct:    1 MLGPTRLKHRVLSSLCEGDDRMWEAFVSISCAEWEEAGKEGEGEGGAEEGRKRLVFRKLREQGVDPRIYFASCEEKFDAGVTGEESECKRK 91
The following BLAST results are available for this feature:
BLAST of EWM20438.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100054|gb|EWM20438.1|3.810e-58100.00hypothetical protein Naga_101668g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10266rna10266Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications