EWM20484.1, cds10189 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20484.1 vs. NCBI_GenBank
Match: gi|585100145|gb|EWM20484.1| (glucose-6-phosphate phosphate translocator chloroplast, partial [Nannochloropsis gaditana]) HSP 1 Score: 508.064 bits (1307), Expect = 0.000e+0 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0 Query: 1 MVYNARCFFYLCSTLLPSSLDSFFLFFPLPSHQRVSTSLLTTRLHPVICKSRSIATFQSTEVAILRGIIMRLSLYVLLLSTLLLVVTAESFVARPSSSSFLSTSKRHLLPQPCPSLSPGSIDPLLPKRKNVFPVQNAATSHAAAALMEKKGGGAVVLEGTRTLWAKSKVWVFISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRARCVAPPSLPPSLPPSFSLSLSIRHSLPPLLPPPSSLPPY 259 MVYNARCFFYLCSTLLPSSLDSFFLFFPLPSHQRVSTSLLTTRLHPVICKSRSIATFQSTEVAILRGIIMRLSLYVLLLSTLLLVVTAESFVARPSSSSFLSTSKRHLLPQPCPSLSPGSIDPLLPKRKNVFPVQNAATSHAAAALMEKKGGGAVVLEGTRTLWAKSKVWVFISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRARCVAPPSLPPSLPPSFSLSLSIRHSLPPLLPPPSSLPPY Sbjct: 1 MVYNARCFFYLCSTLLPSSLDSFFLFFPLPSHQRVSTSLLTTRLHPVICKSRSIATFQSTEVAILRGIIMRLSLYVLLLSTLLLVVTAESFVARPSSSSFLSTSKRHLLPQPCPSLSPGSIDPLLPKRKNVFPVQNAATSHAAAALMEKKGGGAVVLEGTRTLWAKSKVWVFISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRARCVAPPSLPPSLPPSFSLSLSIRHSLPPLLPPPSSLPPY 259
BLAST of EWM20484.1 vs. NCBI_GenBank
Match: gi|585112180|gb|EWM29609.1| (uncharacterize protein [Nannochloropsis gaditana]) HSP 1 Score: 77.411 bits (189), Expect = 1.264e-12 Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 0 Query: 107 HLLPQPCPSLSPGSIDPLLPKRKNVFPVQNAATSHAAAALMEKKGGGAVVLEGTRTLWAKSKVWV--FISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRAR 221 H +P PS SP +++ LL K + + N A + G + AK V + +LW+ NV +NI NK+VLNALPLP+TV+ AQLG+GAVY L WL+R R Sbjct: 102 HPVPLCAPSSSPSALEALLTGSKLMGSMLNKIRGGGAISEARTVNGSGTCKGALVSTHAKGTVLTLSYFALWFALNVYYNIVNKRVLNALPLPFTVATAQLGIGAVYVSLSWLLRVR 218
BLAST of EWM20484.1 vs. NCBI_GenBank
Match: gi|299470102|emb|CBN78131.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 75.0998 bits (183), Expect = 6.201e-12 Identity = 50/147 (34.01%), Postives = 72/147 (48.98%), Query Frame = 0 Query: 86 VTAESFVARPSSSSFLS-----TSKRHLLPQPCPSLSPGSIDPLLPKRKNVFPV------QNAATSHAAAALMEKKGGGAVVLEGTRTLWAKSKVWVFISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRAR 221 + + S ARPSS+ +S R + Q P+ G R +F ++AA S A+A E K ++V KV + LWY FN+ +NIYNK+VLN LP+PW ++ AQLG+G +Y LWL + R Sbjct: 28 IASPSACARPSSAGIMSRASALADNRVRMQQELPTTPAGG----RAARTELFSTPAASGDKDAAPSPASAVEKEAKASPSMV-----------KVTAYFGLWYLFNIGYNIYNKRVLNILPMPWLMASAQLGIGLLYVFPLWLTKLR 159
BLAST of EWM20484.1 vs. NCBI_GenBank
Match: gi|397638634|gb|EJK73151.1| (hypothetical protein THAOC_05244, partial [Thalassiosira oceanica]) HSP 1 Score: 74.3294 bits (181), Expect = 9.060e-12 Identity = 39/98 (39.80%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 125 LPKRKNVFPVQNAATSHAAAALMEKKGGGAVVLEGTRTLWAKS-KVWVFISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRAR 221 +P N F +A TS + A + GG AV E + A++ KV + +LWY FN+ +NIYNK+ LNAL PWT++ Q+ G +Y + LWL+ R Sbjct: 39 VPAVSNTF--NSARTSQSTALALSSTGGDAVAEESAGSGLAETLKVGSYFALWYLFNIGYNIYNKQALNALDFPWTIATIQMATGILYFVPLWLLGLR 134
BLAST of EWM20484.1 vs. NCBI_GenBank
Match: gi|397610696|gb|EJK60971.1| (hypothetical protein THAOC_18603 [Thalassiosira oceanica]) HSP 1 Score: 74.7146 bits (182), Expect = 9.575e-12 Identity = 39/98 (39.80%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 125 LPKRKNVFPVQNAATSHAAAALMEKKGGGAVVLEGTRTLWAKS-KVWVFISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRAR 221 +P N F +A TS + A + GG AV E + A++ KV + +LWY FN+ +NIYNK+ LNAL PWT++ Q+ G +Y + LWL+ R Sbjct: 38 VPAVSNTF--NSARTSQSTALALSSTGGDAVAEESAGSGLAETLKVGSYFALWYLFNIGYNIYNKQALNALDFPWTIATIQMATGILYFVPLWLLGLR 133
BLAST of EWM20484.1 vs. NCBI_GenBank
Match: gi|585113114|gb|EWM30451.1| (phosphate phosphoenolpyruvate translocator precursor [Nannochloropsis gaditana]) HSP 1 Score: 72.4034 bits (176), Expect = 5.814e-11 Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = 0 Query: 146 LMEKKGGGAVVLEGTRTLWAKS-KVWVFISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRAR 221 L+ ++GG G+ ++ KV F LWY FN+ +NIYNKK LN LPLPW V + QL LG +Y LWL R Sbjct: 81 LVSRRGGEVATATGSDAGVKQTLKVGSFFFLWYLFNIGYNIYNKKALNVLPLPWMVGLVQLSLGLLYVFPLWLFGIR 157
BLAST of EWM20484.1 vs. NCBI_GenBank
Match: gi|299116158|emb|CBN76065.1| (putative phosphate/phosphoenolpyruvate translocator precursor protein [Ectocarpus siliculosus]) HSP 1 Score: 68.1662 bits (165), Expect = 1.607e-9 Identity = 39/99 (39.39%), Postives = 59/99 (59.60%), Query Frame = 0 Query: 136 NAATSHAAAALMEKKGGGA-------VVLEGTRTLWAKSKVWVFISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRARCVAPPS 227 N+++ + AA + + G GA + E L +++V + LWY NV +NI NKKVLNALPLP ++++ QLG+G+++ WLVRAR PP Sbjct: 56 NSSSDSSGAAGLLRGGDGAGPATRSSLTAEAGSGLKDRARVLGYFGLWYALNVWYNIVNKKVLNALPLPSSIAVLQLGIGSLWVGTQWLVRART--PPG 152
BLAST of EWM20484.1 vs. NCBI_GenBank
Match: gi|551613765|ref|XP_005787855.1| (hypothetical protein EMIHUDRAFT_352050 [Emiliania huxleyi CCMP1516] >gi|485641260|gb|EOD35426.1| hypothetical protein EMIHUDRAFT_352050 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 66.6254 bits (161), Expect = 5.380e-9 Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0 Query: 172 FISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRAR 221 F +LWY FN+ +NIYNKK LNALP+PWT+++ QL +G Y + LW R Sbjct: 75 FFALWYLFNIGYNIYNKKALNALPIPWTMALLQLFVGIPYCLFLWTTGLR 124
BLAST of EWM20484.1 vs. NCBI_GenBank
Match: gi|1189393182|gb|OSX80082.1| (hypothetical protein BU14_0060s0047 [Porphyra umbilicalis]) HSP 1 Score: 65.855 bits (159), Expect = 9.161e-9 Identity = 50/138 (36.23%), Postives = 65/138 (47.10%), Query Frame = 0 Query: 86 VTAESFVARPSSSSFLSTSKRHLLPQPCPSLSPGSIDPLLPKRKNVFPVQNAATSHAAAALMEKKGGGAVVLEGT--RTLWAKSKVWVFISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRAR 221 VTA ARP + + R LL + GS PL +R A + A ++L GA E +TL KV + I +WY N+ +NI NK+VLN P PW VS AQL G VY + LW V+ R Sbjct: 19 VTASVVAARPGAFAVTPRYGRSLLA------AVGSKAPLQSRR--------VAVTAAPSSLRMAASPGATSEEAASAQTL----KVSILIGMWYLLNIGYNITNKRVLNWFPFPWFVSWAQLAFGVVYCVALWAVKLR 138
BLAST of EWM20484.1 vs. NCBI_GenBank
Match: gi|545703712|ref|XP_005704181.1| (sugar-phosphate:phosphate translocator, DMT family [Galdieria sulphuraria] >gi|194462447|gb|ACF72679.1| putative hexose phosphate translocator [Galdieria sulphuraria] >gi|452820621|gb|EME27661.1| sugar-phosphate:phosphate translocator, DMT family [Galdieria sulphuraria]) HSP 1 Score: 65.0846 bits (157), Expect = 1.519e-8 Identity = 47/134 (35.07%), Postives = 66/134 (49.25%), Query Frame = 0 Query: 94 RPSSSSFLSTSKRHLLPQPCPSLSPG---SIDPLLPKRKNVFPVQNAATSHAAAALMEKKGGGA---VVLEGTRTLWAKSKVWVFISLWYFFNVAFNIYNKKVLNALPLPWTVSIAQLGLGAVYAMLLWLVRAR 221 + S SS + SK+ LL P +LS ++ L K NV AA+ + + GG+ + + TL KV + LWYFFN FNI NK+ LN PW +S QLG+GA+Y LW++ R Sbjct: 29 KNSISSHMEGSKK-LLGTPRFTLSRSQFLNVSYLRTKYNNVASSSKGEKDIIRAAVDKSESGGSPQKSSVGVSPTLVHTLKVGFYFFLWYFFNFIFNIANKRTLNMWKYPWVLSTIQLGVGALYCTFLWVLGLR 161 The following BLAST results are available for this feature:
BLAST of EWM20484.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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