EWM20489.1, cds10185 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20489.1 vs. NCBI_GenBank
Match: gi|585100152|gb|EWM20489.1| (hypothetical protein Naga_100382g4 [Nannochloropsis gaditana]) HSP 1 Score: 308.916 bits (790), Expect = 2.058e-106 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 Query: 1 MPSLLLWLFILLVLLPAVFLLLLIKLPKPVPARWEVRLFLLMGMPADQFLSYIIQNGVDPVFWHRALYATYISLMAAFFWIPKEEEKYSVEQIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFLGREVHGQAVCRA 153 MPSLLLWLFILLVLLPAVFLLLLIKLPKPVPARWEVRLFLLMGMPADQFLSYIIQNGVDPVFWHRALYATYISLMAAFFWIPKEEEKYSVEQIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFLGREVHGQAVCRA Sbjct: 1 MPSLLLWLFILLVLLPAVFLLLLIKLPKPVPARWEVRLFLLMGMPADQFLSYIIQNGVDPVFWHRALYATYISLMAAFFWIPKEEEKYSVEQIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFLGREVHGQAVCRA 153
BLAST of EWM20489.1 vs. NCBI_GenBank
Match: gi|585110923|gb|EWM28507.1| (hypothetical protein Naga_100058g18 [Nannochloropsis gaditana]) HSP 1 Score: 123.635 bits (309), Expect = 3.789e-30 Identity = 68/146 (46.58%), Postives = 95/146 (65.07%), Query Frame = 0 Query: 1 MPSLLLWLFILLVLLPAVFLLLLIKLPKPVPARWEVRLFLLMGMPADQFLSYIIQNG--VDPVFWHRALYATYISLMAAFFWIPKEEEKYSVEQIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFLGRE 144 MP +L + L +L F+L LI LP+ V RWEV+ + G Q+ Y+ ++ VDP++WHRAL+ T IS +F W PKEE++Y E I I PP+FI+GH+RSGT+ LHEL++ D+R VAPT +QC+ PR+FL RE Sbjct: 122 MPVILKIIVGLFIL----FILSLIYLPRSVKHRWEVKFMVAQGWTLRQWFVYLARHNFVVDPIYWHRALFITVISTFTSFVWAPKEEKEYPEETIRATTIQQPPLFILGHFRSGTTRLHELMSKDDRFVAPTVYQCFAPRVFLHRE 263
BLAST of EWM20489.1 vs. NCBI_GenBank
Match: gi|918704101|ref|WP_052573134.1| (sulfotransferase family protein [Haloferula sp. BvORR071]) HSP 1 Score: 73.1738 bits (178), Expect = 2.480e-12 Identity = 42/119 (35.29%), Postives = 66/119 (55.46%), Query Frame = 0 Query: 29 PVPARWEVRLFLLMGMPADQFLSYIIQNG--VDPVFWHRALYATYISLMAAFFWIPKEEEKYSVEQIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVA-PTAFQCYVPRIFLGRE 144 P+ RW + L G+ A + + +N VDPV+WHRA + +S+ +F+ + +E+ +Y +Q+ I P+FI+GH+RSGT+ LH LL D+ A +Q P IFL E Sbjct: 4 PLKHRWSISHNYLTGITAGDWWRLLEENNFAVDPVYWHRAAVVSVLSVANSFYRL-REDREYG-DQVAATVIGKAPLFILGHWRSGTTHLHNLLAQDDTSFAYANTYQVVNPHIFLTTE 120
BLAST of EWM20489.1 vs. NCBI_GenBank
Match: gi|502677553|ref|WP_012913265.1| (sulfotransferase family protein [Pirellula staleyi] >gi|283440564|gb|ADB19006.1| hypothetical protein Psta_4359 [Pirellula staleyi DSM 6068]) HSP 1 Score: 68.9366 bits (167), Expect = 8.287e-11 Identity = 36/101 (35.64%), Postives = 59/101 (58.42%), Query Frame = 0 Query: 43 GMPADQFLSYIIQNG--VDPVFWHRALYATYISLMAAFFWIPKEEEKYSVEQIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFL 141 GM A + I++G + P+ W A+ I+ + + + + + S +I+ I PP+FIIGH+RSGT+ LHE+++ DER +PT +QC+ P FL Sbjct: 41 GMRAGDWWKLCIKHGFRIHPIRWPMAVLLGMITPVNSILRLWQRAQYGS--RIDRTRIEEPPVFIIGHWRSGTTFLHEVMHQDERFYSPTTYQCFAPHHFL 139
BLAST of EWM20489.1 vs. NCBI_GenBank
Match: gi|1189247139|ref|WP_085670946.1| (hypothetical protein [Mycobacterium szulgai] >gi|1183186371|gb|ORX02654.1| hypothetical protein AWC27_28215 [Mycobacterium szulgai]) HSP 1 Score: 68.5514 bits (166), Expect = 9.918e-11 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 0 Query: 40 LLMGMPADQFLSYIIQN--GVDPVFWHRALYATYISLMAAF--FWIPKEEEKYSVEQIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFL 141 L +G ++ +I+N V WH A+ T++S++ ++ FW ++ + +++ + PI PPIFI+GH+R+GT+LLHELL DE PT ++C P FL Sbjct: 20 LWIGCSFSAWIRLLIRNRFAVHWSRWHFAVLYTFLSVVNSYLGFW----QKIWFGKRVAKTPIADPPIFIVGHWRTGTTLLHELLALDEHHTGPTGYECLAPHHFL 121
BLAST of EWM20489.1 vs. NCBI_GenBank
Match: gi|1068908189|ref|WP_069623589.1| (hypothetical protein [Methyloceanibacter marginalis] >gi|1063655382|gb|ODS03211.1| hypothetical protein AUC71_10860 [Methyloceanibacter marginalis]) HSP 1 Score: 65.855 bits (159), Expect = 1.399e-10 Identity = 34/91 (37.36%), Postives = 50/91 (54.95%), Query Frame = 0 Query: 73 SLMAAFFWIPKE------EEKYSVEQIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFL---GREVH-GQAVCRA 153 +A F W+P E + E +P+ PPIF++GH+RSGT+LLH+L + D L PT ++C+ P FL GR H + CR+ Sbjct: 67 DTLALFIWVPWNTPLTWISEALYKRKAEALPLDTPPIFVVGHWRSGTTLLHDLFSEDPNLAYPTTYECFFPHHFLLTEGRLDHVSRCSCRS 157
BLAST of EWM20489.1 vs. NCBI_GenBank
Match: gi|1056707674|ref|WP_068132581.1| (sulfotransferase [Roseimaritima ulvae]) HSP 1 Score: 67.781 bits (164), Expect = 1.706e-10 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0 Query: 98 ILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFLGRE 144 +L PP+FI+GH+RSGT+LLHEL+N DERL P+ FQC+ P FL E Sbjct: 92 LLAPPMFILGHWRSGTTLLHELINKDERLGCPSTFQCFAPHHFLVSE 138
BLAST of EWM20489.1 vs. NCBI_GenBank
Match: gi|1184693281|ref|WP_085252897.1| (hypothetical protein [Mycobacterium riyadhense]) HSP 1 Score: 67.781 bits (164), Expect = 1.781e-10 Identity = 36/79 (45.57%), Postives = 51/79 (64.56%), Query Frame = 0 Query: 63 WHRALYATYISLMAAFFWIPKEEEKYSVEQIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFL 141 WH A+ T+IS+M + + ++ Q+ + I PPIFIIGH+R+GT+LLHELL D+R APT F+C P+ FL Sbjct: 33 WHFAILYTFISVMNSLLGL--FQKIAFGRQVAKTVIEDPPIFIIGHWRTGTTLLHELLILDDRHTAPTGFECIAPQHFL 109
BLAST of EWM20489.1 vs. NCBI_GenBank
Match: gi|1200642938|gb|OUX50531.1| (sulfotransferase family protein [bacterium TMED283]) HSP 1 Score: 67.3958 bits (163), Expect = 2.588e-10 Identity = 28/50 (56.00%), Postives = 39/50 (78.00%), Query Frame = 0 Query: 92 QIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFL 141 ++EE + PP+FI+GH+RSGT+LLHEL+ DERL +P+ FQC+ P FL Sbjct: 49 KLEEAELHGPPVFIVGHWRSGTTLLHELMVRDERLSSPSTFQCFAPCHFL 98
BLAST of EWM20489.1 vs. NCBI_GenBank
Match: gi|886316618|emb|CKT95386.1| (Uncharacterised protein [Mycobacterium tuberculosis] >gi|886813007|emb|CKU34029.1| Uncharacterised protein [Mycobacterium tuberculosis]) HSP 1 Score: 65.0846 bits (157), Expect = 2.902e-10 Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 0 Query: 40 LLMGMPADQFLSYIIQN--GVDPVFWHRALYATYISLMAAFFWIPKEEEKYSVEQIEEVPILHPPIFIIGHYRSGTSLLHELLNNDERLVAPTAFQCYVPRIFLGRE 144 L +G ++ +I+N V WH A+ T++S++ + + ++ ++ E I PPIFI+GH+R+GT+LLHELL D+R PT ++C P FL E Sbjct: 20 LWVGCNFSAWMRLLIRNRFAVHHSRWHFAVLYTFLSMVNSC--LGLWQKIVFGRRVAETVIADPPIFIVGHWRTGTTLLHELLVVDDRHTGPTGYECLAPHHFLLTE 124 The following BLAST results are available for this feature:
BLAST of EWM20489.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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