EWM20490.1, cds10182 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20490.1 vs. NCBI_GenBank
Match: gi|585100153|gb|EWM20490.1| (phosphatidylserine synthase [Nannochloropsis gaditana]) HSP 1 Score: 719.924 bits (1857), Expect = 0.000e+0 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0 Query: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLIRTPPPEIGYPWLATLLLLGLWMLLSLTLVKEQDLGRRLLGSGGRNGKKHNGGRGERRRKSKGEKEEEEEEEEGEEGEEEEEALNGGKEKRAEGLGNLTGKEVTVGVVQEIVDMVFFLSFLPLLYLIRQWVF 356 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLIRTPPPEIGYPWLATLLLLGLWMLLSLTLVKEQDLGRRLLGSGGRNGKKHNGGRGERRRKSKGEKEEEEEEEEGEEGEEEEEALNGGKEKRAEGLGNLTGKEVTVGVVQEIVDMVFFLSFLPLLYLIRQWVF Sbjct: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLIRTPPPEIGYPWLATLLLLGLWMLLSLTLVKEQDLGRRLLGSGGRNGKKHNGGRGERRRKSKGEKEEEEEEEEGEEGEEEEEALNGGKEKRAEGLGNLTGKEVTVGVVQEIVDMVFFLSFLPLLYLIRQWVF 356
BLAST of EWM20490.1 vs. NCBI_GenBank
Match: gi|298710355|emb|CBJ31973.1| (Phosphatidylserine synthase [Ectocarpus siliculosus]) HSP 1 Score: 295.434 bits (755), Expect = 4.335e-92 Identity = 158/385 (41.04%), Postives = 237/385 (61.56%), Query Frame = 0 Query: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDW-SGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLIRTPPPEIGYPWLATLLLLGLWMLL-------------------------SLTLVKEQDLGRRLLGSGGRNGKK-HNGGRGERRRKSKGEKEEEEEEEEGEEGEEEEEALNGGKEKRAEGLGNLTGKEVTVGVVQE--IVDMVFFLSFLPLLYLIRQWVF 356 ++C L+A+++ QL EVWF+AH +GWW KM +FRDWGVCW+LS+GFE+LE ++ +L+P+F ECWWDSL+ID+LGAN+LGM G TL+ LET +DW S + + R+ RL+ + SP ++++RW FSS KR QV ++ T+L+ELNAF++++ L+IP NS FN +R++++ L+A A +EYY++ +NP +RLG NAW ++A+MQ+E+++W+KF+P + + PPE+ PWLATL L LW+LL +T E L GG NG + G + K+ G + + GE G ++A K +R L K T +V + VD VF LSF+PLLYL++QW + Sbjct: 180 LECELSASAVIGQLREVWFLAHLVGWWCKMCLFRDWGVCWVLSVGFELLELSMGWLVPQFHECWWDSLIIDLLGANVLGMTLGLYTLRFLETRTYDWNSKEKSHELARSLRLLAKFSPLGWSKWRWEAFSSLKRTAQVFSMVAATMLLELNAFLVMNALEIPNNSNFNYMRMTVIFLVALLACSEYYEYCSNPACNRLGQNAWLILAIMQVEILLWIKFFPQPLMNASSPPEVKLPWLATLSLFSLWVLLFVAVREDPADAAAASAGVRAGALTGGVTSASESMSSMGSLPDGGSNGGSVGDAGGDGQGDKTGGVSGSGKPDGCGEGGGGGDDAGVDTKPRRRNSLSASRTKRKTAMLVAKWGAVDAVFILSFIPLLYLVKQWSY 564
BLAST of EWM20490.1 vs. NCBI_GenBank
Match: gi|669146622|ref|XP_008608873.1| (hypothetical protein SDRG_04957 [Saprolegnia diclina VS20] >gi|530739698|gb|EQC37940.1| hypothetical protein SDRG_04957 [Saprolegnia diclina VS20]) HSP 1 Score: 274.248 bits (700), Expect = 2.914e-85 Identity = 126/249 (50.60%), Postives = 171/249 (68.67%), Query Frame = 0 Query: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLIRTPPPEIGYPWLATLLLLGLWMLL 249 ++C + + +++ ++ +WF+AH GWWGKM MFRDW CW+L++ FE+LE QF+IP+F+ECWWDSL +D+ GAN +GM G LTL+ LET +DWSG + + G RR + + +P+S++RY W +FSSFKRF V V + V LL+ELNAF LL TL IPK S NK RL L+ +L PAA+EY++FI NP RLG NAW M ++ EV+VW+KF TPPP++ P LA L LWMLL Sbjct: 166 LNCEINSTTLYRGVSSIWFLAHVTGWWGKMCMFRDWRFCWVLAIAFELLELIFQFVIPDFRECWWDSLFMDLFGANFIGMCLGRLTLKYLETKEYDWSGNKGDKRGYVRRALSQFTPFSWSRYDWEVFSSFKRFALVAVAVFVCLLVELNAFFLLSTLSIPKESHINKYRLCLIFMLGLPAASEYFEFITNPACWRLGQNAWMMCSIGVFEVLVWVKFADGLVGTSTPPPDVYLPLLAFSALFSLWMLL 414
BLAST of EWM20490.1 vs. NCBI_GenBank
Match: gi|695369783|ref|XP_009514142.1| (phosphatidylserine synthase [Phytophthora sojae] >gi|348687053|gb|EGZ26867.1| phosphatidylserine synthase [Phytophthora sojae]) HSP 1 Score: 271.166 bits (692), Expect = 9.421e-84 Identity = 126/266 (47.37%), Postives = 180/266 (67.67%), Query Frame = 0 Query: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLIRTPPPE-IGYPWLATLLLLGLWMLLSLTLVKEQDLGRRLLG 265 + C + + S+ ++ +WF+AH GWWGKM MFRDW CW+LS+ FE+LE QF+IP+F+ECWWDSLL+D+LGAN+LGM G +TL LE+ +DWSG + +++G R + + +P+S+ +Y W +FSSFKRF +++ +L+ L+ ELNAF +L TL IPK S FN RL LV L+ PAAAEYY+FI NP RLG N+W ++++ E++VW+KF + L PPP + YP LA +++ +WMLL Q RR G Sbjct: 182 LQCEINSESLMRGVSSIWFLAHVTGWWGKMCMFRDWRFCWVLSIAFEILELAFQFVIPDFQECWWDSLLLDMLGANMLGMCLGRVTLWLLESKEYDWSGRRGKKMGYFRLALNQFTPFSWEQYHWEVFSSFKRFAEIVFAMLLCLITELNAFFMLTTLSIPKESNFNSYRLLLVFLIGIPAAAEYYEFITNPECWRLGQNSWMILSIATFEILVWVKFSANGVLFTQPPPPLVMYPILAFVIMFSVWMLLFFRNAPRQPSSRRARG 447
BLAST of EWM20490.1 vs. NCBI_GenBank
Match: gi|1173927607|gb|OQR81493.1| (phosphatidylserine synthase, partial [Thraustotheca clavata]) HSP 1 Score: 268.47 bits (685), Expect = 1.264e-82 Identity = 127/249 (51.00%), Postives = 168/249 (67.47%), Query Frame = 0 Query: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLIRTPPPEIGYPWLATLLLLGLWMLL 249 ++C + S++ ++ +WF+AH GWWGKM MFRDW CW+L + FE+LE QF+IP+F+ECWWDSL +D+ GAN +GM G LTL+ LET +DWSG + G RR + + +P+S++RY W +FSSFKRF V V + V L++ELNAF LL TL IPK S NK RL L+ +L PAA+EYY+FI NP RLG NAW M ++ EV+VW+KF TPPP++ P LA L LWMLL Sbjct: 21 LNCEINGTSLYRGVSSIWFLAHVTGWWGKMCMFRDWRFCWVLGIAFELLELIFQFVIPDFQECWWDSLFMDLFGANFIGMCLGHLTLKYLETKKYDWSGNR----GVLRRTLSQFTPFSWSRYDWEVFSSFKRFALVAVAVFVCLVVELNAFFLLSTLNIPKESHINKYRLCLIFMLGIPAASEYYEFITNPALWRLGQNAWMMCSIGVFEVLVWVKFAHGLAGSTTPPPDVYLPLLAFGFLFALWMLL 265
BLAST of EWM20490.1 vs. NCBI_GenBank
Match: gi|953500337|emb|CEG38978.1| (phosphatidylserine synthase [Plasmopara halstedii]) HSP 1 Score: 266.929 bits (681), Expect = 2.280e-82 Identity = 127/263 (48.29%), Postives = 175/263 (66.54%), Query Frame = 0 Query: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLI-RTPPPEIGYPWLATLLLLGLWMLLSLTLVKEQDLGRR 262 + C + A S+ +T +WF AH GWWGKM MFRDW CW++S+ FE LE LQF+IP+F+ECWWDSL++D+LGAN+LGM G +TL LE+ +DWSG + +++G R + + +P + +Y W +FSSF RF +++ + LLME+NAF LL TL IPK S FN RL LV LL PAAAEYY+FI NP RLG NAW ++++ EV+VW+KF + L + PP + YP LA +++ +WMLL + Q RR Sbjct: 161 LQCKINAESLTRGMTSIWFCAHVTGWWGKMCMFRDWRFCWMISIAFEFLELALQFVIPDFQECWWDSLMLDLLGANMLGMCLGRITLWLLESKEYDWSGRRGKKMGYFRLALNQFTPLRWEQYHWEVFSSFSRFAEIVFAFAMCLLMEMNAFFLLTTLSIPKESNFNSYRLLLVFLLGIPAAAEYYEFITNPECWRLGQNAWMILSIATFEVLVWVKFSANGVLFTKAPPSLVLYPILAFMVMFSIWMLLFFCQKQRQPTSRR 423
BLAST of EWM20490.1 vs. NCBI_GenBank
Match: gi|673025372|ref|XP_008866647.1| (hypothetical protein H310_04197 [Aphanomyces invadans] >gi|574478213|gb|ETW05209.1| hypothetical protein H310_04197 [Aphanomyces invadans]) HSP 1 Score: 264.233 bits (674), Expect = 4.423e-81 Identity = 123/249 (49.40%), Postives = 169/249 (67.87%), Query Frame = 0 Query: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLIRTPPPEIGYPWLATLLLLGLWMLL 249 ++C L S+ ++ +WF AH GWWGKM MFRDW CW+L +GFE+LE Q +IP+F+ECWWDSL +D+LGAN +GM G LTL+ LET +DWSG + ++ G R I + +P+S++RY W +FSS KRF V+V L V L ELNAF LL TL IPK+S NK RL+++ +L PAAAEYY+F+ +P RLG NAW M ++ E++VW+KF + +PP ++ P +A +L LWMLL Sbjct: 183 LECELNMTSLHRGVSSIWFFAHVTGWWGKMCMFRDWRFCWVLGIGFELLELIFQCIIPDFQECWWDSLFMDLLGANFVGMCLGSLTLKYLETKEYDWSGKRSEQRGYFSRAISQFTPFSWSRYDWEVFSSAKRFFMVLVALFVCLFSELNAFFLLTTLNIPKDSNLNKYRLAVMFMLGIPAAAEYYEFVTDPNCYRLGQNAWMMCCIIVFEMLVWVKFSEELEQMTSPPFDVVMPLVAFFVLFSLWMLL 431
BLAST of EWM20490.1 vs. NCBI_GenBank
Match: gi|698798104|ref|XP_009832081.1| (hypothetical protein H257_08017 [Aphanomyces astaci] >gi|574113009|gb|ETV78500.1| hypothetical protein H257_08017 [Aphanomyces astaci]) HSP 1 Score: 261.922 bits (668), Expect = 2.550e-80 Identity = 123/249 (49.40%), Postives = 169/249 (67.87%), Query Frame = 0 Query: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLIRTPPPEIGYPWLATLLLLGLWMLL 249 ++C L S+ ++ +WF+AH GWWGKM MFRDW CW+L +GFE+LE Q +IP+F+ECWWDSL +D+LGAN LGM G LTL+ LET +DWSG + ++ G R I + +P+S++RY W +FSS KRF V+V L V L ELNAF LL TL IPK+S NK RL+++ +L PAAAEYY+F+ +P RLG NAW M ++ E++VW+KF + +PP ++ P + +L LWMLL Sbjct: 185 LECELNMMSLHRGVSSIWFLAHVTGWWGKMCMFRDWRFCWVLGIGFELLELIFQCIIPDFQECWWDSLFMDLLGANFLGMCLGRLTLKYLETKEYDWSGKRSEQRGYFSRAISQFTPFSWSRYDWEVFSSAKRFFMVLVALFVCLFSELNAFFLLTTLSIPKDSNLNKYRLAVMFMLGIPAAAEYYEFVTDPKCYRLGQNAWMMCCIIVFEMLVWVKFSEGLEQMTSPPFDVVAPLVTFSVLFSLWMLL 433
BLAST of EWM20490.1 vs. NCBI_GenBank
Match: gi|566030336|gb|ETI53247.1| (hypothetical protein F443_03779 [Phytophthora parasitica P1569] >gi|567967926|gb|ETK93081.1| hypothetical protein L915_03676 [Phytophthora parasitica] >gi|570333945|gb|ETO81893.1| hypothetical protein F444_03861 [Phytophthora parasitica P1976] >gi|570958072|gb|ETP23051.1| hypothetical protein F441_03763 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 261.151 bits (666), Expect = 5.955e-80 Identity = 129/266 (48.50%), Postives = 182/266 (68.42%), Query Frame = 0 Query: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLI-RTPPPEIGYPWLATLLLLGLWMLLSLTLVKEQDLGRRLLG 265 + C + S+ +T +WF+AH GWWGKM MFRDW +CW+LS+ FE+LE LQF+IP+F+ECWWDSLL+D+LGAN+LGM G +TL LE+ +DWSG + +++G R + + +P+S+ +Y W +FSSFKRF ++ +++ LL ELNAF +L TL IPK S FN RL LV LL PAAAEYY+FI NP RLG N+W ++++ EV+VW+KF + L + PPP + YP LA +++ +WM+L + Q RR G Sbjct: 173 LQCEINPESLTRGVTSIWFLAHVTGWWGKMCMFRDWRLCWVLSIAFEILELALQFVIPDFQECWWDSLLLDLLGANMLGMCLGRVTLWLLESKVYDWSGRRGKKMGYFRLALNQFTPFSWEQYHWEVFSSFKRFAEIFFAIVICLLTELNAFFMLTTLSIPKESNFNSYRLLLVFLLGIPAAAEYYEFITNPECWRLGQNSWMILSIATFEVLVWVKFSANGVLFTQPPPPMVLYPILAFVVMFSIWMVLFFS-SDPQPTSRRARG 437
BLAST of EWM20490.1 vs. NCBI_GenBank
Match: gi|301098976|ref|XP_002898580.1| (phosphatidylserine synthase, putative [Phytophthora infestans T30-4] >gi|262105005|gb|EEY63057.1| phosphatidylserine synthase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 260.381 bits (664), Expect = 1.155e-79 Identity = 126/250 (50.40%), Postives = 176/250 (70.40%), Query Frame = 0 Query: 1 MDCSLTAASIWHQLTEVWFVAHALGWWGKMVMFRDWGVCWILSLGFEVLECTLQFLIPEFKECWWDSLLIDVLGANLLGMGAGWLTLQALETHAFDWSGTQDQRVGRARRLIQRLSPYSFTRYRWSMFSSFKRFLQVIVLLLVTLLMELNAFMLLHTLQIPKNSAFNKIRLSLVALLAFPAAAEYYDFIANPYQSRLGPNAWCMMAVMQLEVVVWLKFWPSTFLIRTPPPE-IGYPWLATLLLLGLWMLL 249 + C++ S+ +T +WF+AH GWWGKM MFRDW +CW+LS+ FE+LE LQF+IP+F+ECWWDSLL+D+LGAN+LGM G +TL L++ +DWSG + +++G R + +L+P+S+ +Y W +FSSFKRF ++ +++ LL ELNAF +L TL IPK S FN RL LV LL PAAAEYY+FI NP RLG N+W M+++ EV+VW+KF + L PPP + YP A + + +WMLL Sbjct: 178 LHCAINPESLTRGVTSIWFIAHVTGWWGKMCMFRDWRLCWVLSIAFEILELALQFVIPDFQECWWDSLLLDLLGANMLGMCLGRVTLWLLQSKEYDWSGRRGKKMGYFRLALNQLTPFSWEQYHWEVFSSFKRFAEIFFAVVICLLTELNAFFMLTTLSIPKESNFNSYRLLLVFLLGIPAAAEYYEFITNPECWRLGQNSWMMLSIATFEVLVWVKFSANGVLFTQPPPPLVMYPIAAFVAMFSIWMLL 427 The following BLAST results are available for this feature:
BLAST of EWM20490.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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