EWM20493.1, cds10179 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|585100159|gb|EWM20493.1| (prolyl 4-hydroxylase [Nannochloropsis gaditana]) HSP 1 Score: 446.817 bits (1148), Expect = 8.429e-159 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0 Query: 1 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWSEEEKDHRWTYTLWLVEEGGCEGES 221 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWSEEEKDHRWTYTLWLVEEGGCEGES Sbjct: 1 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWSEEEKDHRWTYTLWLVEEGGCEGES 221
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|553181927|ref|XP_005853645.1| (hypothetical protein NGA_0470500 [Nannochloropsis gaditana CCMP526] >gi|422295413|gb|EKU22712.1| hypothetical protein NGA_0470500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 237.269 bits (604), Expect = 1.369e-76 Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0 Query: 1 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRK 118 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSR SRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRK Sbjct: 1 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRPLSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRK 118
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|698818669|ref|XP_009842363.1| (hypothetical protein H257_15826 [Aphanomyces astaci] >gi|574102515|gb|ETV68065.1| hypothetical protein H257_15826 [Aphanomyces astaci]) HSP 1 Score: 134.035 bits (336), Expect = 6.366e-35 Identity = 85/220 (38.64%), Postives = 116/220 (52.73%), Query Frame = 0 Query: 1 MRQEASGLFQAGVFYPSFAYRGDER---LEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNG-DSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLP--NWSEEEKDHRWTYTLWLVEE 214 MR+EA LF+ G + S + DE K NV+ ELDGHEWD AP++L YTR I+L P +LN+L P L++S R YA+K+AVS G G+ + +H D D RKVT+VYYLNP W +GGQL++Y + G G + V P DTL +F S+++ H+VLP N E+ R+ TLWLV + Sbjct: 75 MRREAERLFKDGYMFQSMSV--DEHGNSFPKHNVFASELDGHEWDIAPTILQYTRSIMLQAPDMLNTL-----FPE----------LQISSRAYASKLAVSLGDGASYPKHCDTAGMPDQRKVTMVYYLNPHWEPAHGGQLQVYTKDG------------------------GILAVEPVSDTLAVFWSDQVVHDVLPCTNDPNNERAQRYALTLWLVSD 253
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|673038210|ref|XP_008873066.1| (hypothetical protein H310_08919 [Aphanomyces invadans] >gi|574471183|gb|ETV98191.1| hypothetical protein H310_08919 [Aphanomyces invadans]) HSP 1 Score: 130.954 bits (328), Expect = 1.148e-33 Identity = 83/220 (37.73%), Postives = 115/220 (52.27%), Query Frame = 0 Query: 1 MRQEASGLFQAGVFYPSFAYRGDER---LEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNN-GDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLP--NWSEEEKDHRWTYTLWLVEE 214 MR EA L++ G + S + DE+ K NV+ ELDGHEWD AP++L YTR I+L P +LN L P L++S R YA+K+AVS G G+ + +H D D RKVT+VYYLNP W +GG+L++Y + G G V V P DTL +F S+++ H+V P N +E+ R+ TLWLV + Sbjct: 74 MRHEAERLYKEGYMFQSMSV--DEQGKSFPKNNVFASELDGHEWDVAPTILHYTRSIMLQAPSMLNEL---FPE------------LQISSRAYASKLAVSLGDGASYPKHCDTAGLPDQRKVTMVYYLNPHWEPAHGGELQVYTKDG------------------------GVVAVEPRSDTLAVFWSDQVVHDVRPCANAPTDERAQRYALTLWLVSD 252
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|1173952934|gb|OQS00509.1| (hypothetical protein ACHHYP_03435 [Achlya hypogyna]) HSP 1 Score: 119.783 bits (299), Expect = 1.741e-29 Identity = 78/219 (35.62%), Postives = 112/219 (51.14%), Query Frame = 0 Query: 1 MRQEASGLFQAGVFYPSFAYRGDER-LEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNN-GDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWS--EEEKDHRWTYTLWLVEEG 215 MR EA L+ G + S + + R K NV+ EL+G+EWD AP++L YTR ++L P +LN L P L++S R YA+K+AVS G G+ + +H D D RKVT+VYYLNP W G+GG+LR++ +G + E P DTL +F S+ + H+VLP + E+ R+ TLWLV + Sbjct: 66 MRTEAERLYAEGHMFQSNSVDAEGRSYPKPNVFASELNGNEWDLAPTILHYTRSVMLQAPAMLNKL---FPG------------LQMSSRAYASKLAVSLGDGASYPKHCDTAGLPDKRKVTMVYYLNPNWAPGHGGELRVFAPNGTHVVE-------------------------PRADTLAVFWSDLVAHDVLPCETPVEDVAARRYALTLWLVTDN 244
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|813173919|ref|XP_012204913.1| (hypothetical protein SPRG_10391 [Saprolegnia parasitica CBS 223.65] >gi|641530179|gb|KDO24316.1| hypothetical protein SPRG_10391 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 119.783 bits (299), Expect = 1.980e-29 Identity = 78/219 (35.62%), Postives = 111/219 (50.68%), Query Frame = 0 Query: 1 MRQEASGLFQAGVFYPSFAYRGD-ERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNN-GDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWS--EEEKDHRWTYTLWLVEEG 215 MR EA L+ G + S + + K NV+ EL+GHEWD AP++L YTR ++L P +LN+L P L++S R YA+K+AVS G G+ + +H D D RKVT+VYYLNP W G+GG+LR++ +G + E P DTL +F S+ + H+VLP + E R+ TLWLV + Sbjct: 67 MRAEAEKLYAEGHMFQSNSVDANGNAYPKHNVFASELNGHEWDLAPTILHYTRSVMLQAPEMLNTL---FPG------------LQMSSRAYASKLAVSLGDGASYPKHCDTAGLPDKRKVTMVYYLNPNWEPGHGGELRVFAPNGTHVVE-------------------------PRSDTLAVFWSDLVAHDVLPCETPVENIAARRYALTLWLVTDN 245
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|669142022|ref|XP_008606573.1| (hypothetical protein SDRG_02753 [Saprolegnia diclina VS20] >gi|530741857|gb|EQC40099.1| hypothetical protein SDRG_02753 [Saprolegnia diclina VS20]) HSP 1 Score: 117.472 bits (293), Expect = 1.603e-28 Identity = 77/219 (35.16%), Postives = 111/219 (50.68%), Query Frame = 0 Query: 1 MRQEASGLFQAGVFYPSFAYRGD-ERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNN-GDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWS--EEEKDHRWTYTLWLVEEG 215 MR EA L+ G + S + + K NV+ EL+G+EWD AP++L YTR ++L P +LN+L P L++S R YA+K+AVS G G+ + +H D D RKVT+VYYLNP W G+GG+LR++ +G + E P DTL +F S+ + H+VLP + E R+ TLWLV + Sbjct: 67 MRAEAEKLYAEGHMFQSNSVDANGNAYPKHNVFASELNGNEWDLAPTILHYTRSVMLQAPEMLNTL---FPG------------LQMSSRAYASKLAVSLGDGASYPKHCDTAGLPDKRKVTMVYYLNPNWAPGHGGELRVFAPNGTHVVE-------------------------PRSDTLAVFWSDLVAHDVLPCETPVENIAARRYALTLWLVTDN 245
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|1173958029|gb|OQS04453.1| (hypothetical protein THRCLA_03317 [Thraustotheca clavata]) HSP 1 Score: 117.087 bits (292), Expect = 2.591e-28 Identity = 81/218 (37.16%), Postives = 117/218 (53.67%), Query Frame = 0 Query: 1 MRQEASGLFQAGVFYPSFAYRGD-ERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNN-GDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLP--NWSEEEKDHRWTYTLWLVEE 214 MR+E+ L+ G + S + + + K NV+ EL+G+EWD AP++L YTR I+L P +LN L P L++S R YA+K+AVS G G+ + +H D D RKVT+VYYLNP+W G+GG+LR++ G +GT HV + P DTL +F S+ + H+VLP N E+ R+ TLWLV + Sbjct: 71 MRRESERLYAEGHMFQSNSVDAEGKSYPKLNVYASELNGNEWDIAPTILHYTRSIMLQAPEMLNKLF------PG---------LQISSRAYASKLAVSLGEGASYPKHCDTAGLPDKRKVTMVYYLNPKWKLGDGGELRVF----------------GPDGT--------HV-IEPHVDTLAVFWSDLVAHDVLPCENPIEDIDARRYALTLWLVTD 248
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|224012723|ref|XP_002295014.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969453|gb|EED87794.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 80.4925 bits (197), Expect = 2.359e-15 Identity = 55/141 (39.01%), Postives = 82/141 (58.16%), Query Frame = 0 Query: 84 LRLSPRGYANKIAVSTGGGSHFLRHTDN----NNGDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEE--GHVDVWPEGDTLVMFLSEELEHEVL---PNWS-EEEKDHRWTYTLWLVEE 214 ++LS + K+AV+ GGS + H DN GD+RK+T + YLNP W G+GG+LR++ + Y +E N++ DGGEE VD+ PEG L++F S+E+ HEVL PN S ++E R+ T+W+ E Sbjct: 23 VQLSNSTFNAKLAVTRPGGSKYPLHIDNPRGVEVGDTRKLTCILYLNPGWGEGDGGELRMFLKK-QYNDDEIGNNSN-------DGGEEELTTVDLSPEGGRLLLFWSDEIPHEVLATAPNASVDDESLDRYALTVWVPTE 155
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|488684172|ref|WP_002609326.1| (Egl nine homolog 2 [Stigmatella aurantiaca] >gi|115371100|gb|EAU70022.1| putative Egl nine homolog 2 [Stigmatella aurantiaca DW4/3-1] >gi|309397211|gb|ADO74670.1| Egl nine-like protein [Stigmatella aurantiaca DW4/3-1]) HSP 1 Score: 74.3294 bits (181), Expect = 7.058e-13 Identity = 46/115 (40.00%), Postives = 60/115 (52.17%), Query Frame = 0 Query: 94 KIAVSTGGGSHFLRHTDNNNGDS-RKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWSEEEKDHRWTY 207 ++A GGG+ ++RH D G S R++T +YY NP+W +GGQLRLYP G GT ++V P DTLV+FLSE LEHEVLP + W Y Sbjct: 105 QLAHYPGGGTRYVRHRDAFPGQSNRRLTAIYYANPDWRPAHGGQLRLYP----------------GAGT---------LEVAPALDTLVVFLSERLEHEVLPTHAPRLALTAWYY 194 The following BLAST results are available for this feature:
BLAST of EWM20493.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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