EWM20493.1, cds10179 (CDS) Nannochloropsis gaditana

Overview
NameEWM20493.1
Unique Namecds10179
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037266.1:11009..11120 -
Alignment locationKK037266.1:10566..10807 -
Alignment locationKK037266.1:9961..10272 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20493.1
Productprolyl 4-hydroxylase
Orig transcript idgnl|cribi|Naga_100371g2.367.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037266.1supercontigKK037266.1:11009..11120 -
KK037266.1supercontigKK037266.1:10566..10807 -
KK037266.1supercontigKK037266.1:9961..10272 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0003824catalytic activity
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0016491oxidoreductase activity
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0031418L-ascorbic acid binding
GO:0005506iron ion binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR005123Oxoglu/Fe-dep_dioxygenase
IPR006620Pro_4_hyd_alph
Homology
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|585100159|gb|EWM20493.1| (prolyl 4-hydroxylase [Nannochloropsis gaditana])

HSP 1 Score: 446.817 bits (1148), Expect = 8.429e-159
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
Query:    1 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWSEEEKDHRWTYTLWLVEEGGCEGES 221
            MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWSEEEKDHRWTYTLWLVEEGGCEGES
Sbjct:    1 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWSEEEKDHRWTYTLWLVEEGGCEGES 221          
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|553181927|ref|XP_005853645.1| (hypothetical protein NGA_0470500 [Nannochloropsis gaditana CCMP526] >gi|422295413|gb|EKU22712.1| hypothetical protein NGA_0470500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 237.269 bits (604), Expect = 1.369e-76
Identity = 116/118 (98.31%), Postives = 116/118 (98.31%), Query Frame = 0
Query:    1 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRK 118
            MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSR  SRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRK
Sbjct:    1 MRQEASGLFQAGVFYPSFAYRGDERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRPLSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNGDSRK 118          
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|698818669|ref|XP_009842363.1| (hypothetical protein H257_15826 [Aphanomyces astaci] >gi|574102515|gb|ETV68065.1| hypothetical protein H257_15826 [Aphanomyces astaci])

HSP 1 Score: 134.035 bits (336), Expect = 6.366e-35
Identity = 85/220 (38.64%), Postives = 116/220 (52.73%), Query Frame = 0
Query:    1 MRQEASGLFQAGVFYPSFAYRGDER---LEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNNG-DSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLP--NWSEEEKDHRWTYTLWLVEE 214
            MR+EA  LF+ G  + S +   DE      K NV+  ELDGHEWD AP++L YTR I+L  P +LN+L      P           L++S R YA+K+AVS G G+ + +H D     D RKVT+VYYLNP W   +GGQL++Y + G                        G + V P  DTL +F S+++ H+VLP  N    E+  R+  TLWLV +
Sbjct:   75 MRREAERLFKDGYMFQSMSV--DEHGNSFPKHNVFASELDGHEWDIAPTILQYTRSIMLQAPDMLNTL-----FPE----------LQISSRAYASKLAVSLGDGASYPKHCDTAGMPDQRKVTMVYYLNPHWEPAHGGQLQVYTKDG------------------------GILAVEPVSDTLAVFWSDQVVHDVLPCTNDPNNERAQRYALTLWLVSD 253          
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|673038210|ref|XP_008873066.1| (hypothetical protein H310_08919 [Aphanomyces invadans] >gi|574471183|gb|ETV98191.1| hypothetical protein H310_08919 [Aphanomyces invadans])

HSP 1 Score: 130.954 bits (328), Expect = 1.148e-33
Identity = 83/220 (37.73%), Postives = 115/220 (52.27%), Query Frame = 0
Query:    1 MRQEASGLFQAGVFYPSFAYRGDER---LEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNN-GDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLP--NWSEEEKDHRWTYTLWLVEE 214
            MR EA  L++ G  + S +   DE+     K NV+  ELDGHEWD AP++L YTR I+L  P +LN L    P             L++S R YA+K+AVS G G+ + +H D     D RKVT+VYYLNP W   +GG+L++Y + G                        G V V P  DTL +F S+++ H+V P  N   +E+  R+  TLWLV +
Sbjct:   74 MRHEAERLYKEGYMFQSMSV--DEQGKSFPKNNVFASELDGHEWDVAPTILHYTRSIMLQAPSMLNEL---FPE------------LQISSRAYASKLAVSLGDGASYPKHCDTAGLPDQRKVTMVYYLNPHWEPAHGGELQVYTKDG------------------------GVVAVEPRSDTLAVFWSDQVVHDVRPCANAPTDERAQRYALTLWLVSD 252          
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|1173952934|gb|OQS00509.1| (hypothetical protein ACHHYP_03435 [Achlya hypogyna])

HSP 1 Score: 119.783 bits (299), Expect = 1.741e-29
Identity = 78/219 (35.62%), Postives = 112/219 (51.14%), Query Frame = 0
Query:    1 MRQEASGLFQAGVFYPSFAYRGDER-LEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNN-GDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWS--EEEKDHRWTYTLWLVEEG 215
            MR EA  L+  G  + S +   + R   K NV+  EL+G+EWD AP++L YTR ++L  P +LN L    P             L++S R YA+K+AVS G G+ + +H D     D RKVT+VYYLNP W  G+GG+LR++  +G +  E                         P  DTL +F S+ + H+VLP  +  E+    R+  TLWLV + 
Sbjct:   66 MRTEAERLYAEGHMFQSNSVDAEGRSYPKPNVFASELNGNEWDLAPTILHYTRSVMLQAPAMLNKL---FPG------------LQMSSRAYASKLAVSLGDGASYPKHCDTAGLPDKRKVTMVYYLNPNWAPGHGGELRVFAPNGTHVVE-------------------------PRADTLAVFWSDLVAHDVLPCETPVEDVAARRYALTLWLVTDN 244          
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|813173919|ref|XP_012204913.1| (hypothetical protein SPRG_10391 [Saprolegnia parasitica CBS 223.65] >gi|641530179|gb|KDO24316.1| hypothetical protein SPRG_10391 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 119.783 bits (299), Expect = 1.980e-29
Identity = 78/219 (35.62%), Postives = 111/219 (50.68%), Query Frame = 0
Query:    1 MRQEASGLFQAGVFYPSFAYRGD-ERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNN-GDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWS--EEEKDHRWTYTLWLVEEG 215
            MR EA  L+  G  + S +   +     K NV+  EL+GHEWD AP++L YTR ++L  P +LN+L    P             L++S R YA+K+AVS G G+ + +H D     D RKVT+VYYLNP W  G+GG+LR++  +G +  E                         P  DTL +F S+ + H+VLP  +  E     R+  TLWLV + 
Sbjct:   67 MRAEAEKLYAEGHMFQSNSVDANGNAYPKHNVFASELNGHEWDLAPTILHYTRSVMLQAPEMLNTL---FPG------------LQMSSRAYASKLAVSLGDGASYPKHCDTAGLPDKRKVTMVYYLNPNWEPGHGGELRVFAPNGTHVVE-------------------------PRSDTLAVFWSDLVAHDVLPCETPVENIAARRYALTLWLVTDN 245          
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|669142022|ref|XP_008606573.1| (hypothetical protein SDRG_02753 [Saprolegnia diclina VS20] >gi|530741857|gb|EQC40099.1| hypothetical protein SDRG_02753 [Saprolegnia diclina VS20])

HSP 1 Score: 117.472 bits (293), Expect = 1.603e-28
Identity = 77/219 (35.16%), Postives = 111/219 (50.68%), Query Frame = 0
Query:    1 MRQEASGLFQAGVFYPSFAYRGD-ERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNN-GDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWS--EEEKDHRWTYTLWLVEEG 215
            MR EA  L+  G  + S +   +     K NV+  EL+G+EWD AP++L YTR ++L  P +LN+L    P             L++S R YA+K+AVS G G+ + +H D     D RKVT+VYYLNP W  G+GG+LR++  +G +  E                         P  DTL +F S+ + H+VLP  +  E     R+  TLWLV + 
Sbjct:   67 MRAEAEKLYAEGHMFQSNSVDANGNAYPKHNVFASELNGNEWDLAPTILHYTRSVMLQAPEMLNTL---FPG------------LQMSSRAYASKLAVSLGDGASYPKHCDTAGLPDKRKVTMVYYLNPNWAPGHGGELRVFAPNGTHVVE-------------------------PRSDTLAVFWSDLVAHDVLPCETPVENIAARRYALTLWLVTDN 245          
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|1173958029|gb|OQS04453.1| (hypothetical protein THRCLA_03317 [Thraustotheca clavata])

HSP 1 Score: 117.087 bits (292), Expect = 2.591e-28
Identity = 81/218 (37.16%), Postives = 117/218 (53.67%), Query Frame = 0
Query:    1 MRQEASGLFQAGVFYPSFAYRGD-ERLEKKNVWNFELDGHEWDYAPSLLMYTREILLHLPPLLNSLSLPLPVPPSRSPSRPPSLLRLSPRGYANKIAVSTGGGSHFLRHTDNNN-GDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLP--NWSEEEKDHRWTYTLWLVEE 214
            MR+E+  L+  G  + S +   + +   K NV+  EL+G+EWD AP++L YTR I+L  P +LN L       P          L++S R YA+K+AVS G G+ + +H D     D RKVT+VYYLNP+W  G+GG+LR++                G +GT        HV + P  DTL +F S+ + H+VLP  N  E+    R+  TLWLV +
Sbjct:   71 MRRESERLYAEGHMFQSNSVDAEGKSYPKLNVYASELNGNEWDIAPTILHYTRSIMLQAPEMLNKLF------PG---------LQISSRAYASKLAVSLGEGASYPKHCDTAGLPDKRKVTMVYYLNPKWKLGDGGELRVF----------------GPDGT--------HV-IEPHVDTLAVFWSDLVAHDVLPCENPIEDIDARRYALTLWLVTD 248          
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|224012723|ref|XP_002295014.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220969453|gb|EED87794.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 80.4925 bits (197), Expect = 2.359e-15
Identity = 55/141 (39.01%), Postives = 82/141 (58.16%), Query Frame = 0
Query:   84 LRLSPRGYANKIAVSTGGGSHFLRHTDN----NNGDSRKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEE--GHVDVWPEGDTLVMFLSEELEHEVL---PNWS-EEEKDHRWTYTLWLVEE 214
            ++LS   +  K+AV+  GGS +  H DN      GD+RK+T + YLNP W  G+GG+LR++ +   Y  +E   N++       DGGEE    VD+ PEG  L++F S+E+ HEVL   PN S ++E   R+  T+W+  E
Sbjct:   23 VQLSNSTFNAKLAVTRPGGSKYPLHIDNPRGVEVGDTRKLTCILYLNPGWGEGDGGELRMFLKK-QYNDDEIGNNSN-------DGGEEELTTVDLSPEGGRLLLFWSDEIPHEVLATAPNASVDDESLDRYALTVWVPTE 155          
BLAST of EWM20493.1 vs. NCBI_GenBank
Match: gi|488684172|ref|WP_002609326.1| (Egl nine homolog 2 [Stigmatella aurantiaca] >gi|115371100|gb|EAU70022.1| putative Egl nine homolog 2 [Stigmatella aurantiaca DW4/3-1] >gi|309397211|gb|ADO74670.1| Egl nine-like protein [Stigmatella aurantiaca DW4/3-1])

HSP 1 Score: 74.3294 bits (181), Expect = 7.058e-13
Identity = 46/115 (40.00%), Postives = 60/115 (52.17%), Query Frame = 0
Query:   94 KIAVSTGGGSHFLRHTDNNNGDS-RKVTLVYYLNPEWPSGNGGQLRLYPRSGAYGQEEGLKNTSGGEGTEADGGEEGHVDVWPEGDTLVMFLSEELEHEVLPNWSEEEKDHRWTY 207
            ++A   GGG+ ++RH D   G S R++T +YY NP+W   +GGQLRLYP                G GT         ++V P  DTLV+FLSE LEHEVLP  +       W Y
Sbjct:  105 QLAHYPGGGTRYVRHRDAFPGQSNRRLTAIYYANPDWRPAHGGQLRLYP----------------GAGT---------LEVAPALDTLVVFLSERLEHEVLPTHAPRLALTAWYY 194          
The following BLAST results are available for this feature:
BLAST of EWM20493.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100159|gb|EWM20493.1|8.429e-159100.00prolyl 4-hydroxylase [Nannochloropsis gaditana][more]
gi|553181927|ref|XP_005853645.1|1.369e-7698.31hypothetical protein NGA_0470500 [Nannochloropsis ... [more]
gi|698818669|ref|XP_009842363.1|6.366e-3538.64hypothetical protein H257_15826 [Aphanomyces astac... [more]
gi|673038210|ref|XP_008873066.1|1.148e-3337.73hypothetical protein H310_08919 [Aphanomyces invad... [more]
gi|1173952934|gb|OQS00509.1|1.741e-2935.62hypothetical protein ACHHYP_03435 [Achlya hypogyna... [more]
gi|813173919|ref|XP_012204913.1|1.980e-2935.62hypothetical protein SPRG_10391 [Saprolegnia paras... [more]
gi|669142022|ref|XP_008606573.1|1.603e-2835.16hypothetical protein SDRG_02753 [Saprolegnia dicli... [more]
gi|1173958029|gb|OQS04453.1|2.591e-2837.16hypothetical protein THRCLA_03317 [Thraustotheca c... [more]
gi|224012723|ref|XP_002295014.1|2.359e-1539.01predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|488684172|ref|WP_002609326.1|7.058e-1340.00Egl nine homolog 2 [Stigmatella aurantiaca] >gi|11... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10210rna10210Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications