EWM20524.1, cds10150 (CDS) Nannochloropsis gaditana

Overview
NameEWM20524.1
Unique Namecds10150
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:65118..66140 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20524.1
ProductAlpha carbonic anhydrase
Orig transcript idgnl|cribi|Naga_100335g4.5840.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:65118..66140 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR001148Carbonic_anhydrase_a
Homology
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|585100203|gb|EWM20524.1| (Alpha carbonic anhydrase [Nannochloropsis gaditana])

HSP 1 Score: 708.753 bits (1828), Expect = 0.000e+0
Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0
Query:    1 MRFLIILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVLK 340
            MRFLIILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVLK
Sbjct:    1 MRFLIILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVLK 340          
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|585100204|gb|EWM20525.1| (Carbonic anhydrase, alpha-class [Nannochloropsis gaditana])

HSP 1 Score: 628.246 bits (1619), Expect = 0.000e+0
Identity = 302/337 (89.61%), Postives = 312/337 (92.58%), Query Frame = 0
Query:    4 LIILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVLK 340
            L ILFILPFATFAAFTKQKYTGGLFSDPTQKPQPS+AVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGL+++   TYEV FFG ACRKPFTLTVDGQVWVLWQIH HG S HSVNG YSP+E HM HLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTAR ADEGTVPGG++VRMVKAGNPYWLLPKRKDYWHYQGSL T S +G CQLNPG SFNSTINNVQWYVFKHQQT S SQIAW  DY C LPLPYLC +NRPLQEILPETQVYSYG+VLK
Sbjct:    6 LCILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSVAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARHADEGTVPGGKQVRMVKAGNPYWLLPKRKDYWHYQGSLTTVS-YGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQEILPETQVYSYGKVLK 341          
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|585102601|gb|EWM22174.1| (carbonate dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 144.821 bits (364), Expect = 5.780e-37
Identity = 106/339 (31.27%), Postives = 148/339 (43.66%), Query Frame = 0
Query:    7 LFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVN------AWSYYPNT-FGTCN---GTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSY 335
            +++ P  T   FT       L   P    + + ++       +WSY  N  +  C+     +F  C       E CGP NW +I+     TC     G QQSPIN+         + KA G M FSG  C   +E    T+EV      C   F   + G  + L Q HFH    HS+N  Y P+EVH+ H  V      A     VL+VFL PG ++  F  L A  A     P   ++      N Y +LP+   +WHY GSL TP     CQ   G S N       WY+FK   T S SQ+ ++  Y  DLPL    R +R  Q+++  T ++++
Sbjct:   20 IYLFPQNTMKIFTTSAACLALMMAPLSLIKAATSMEDLEKMESWSYIHNVNYAPCDDADAKSFGCCGKPEDGKERCGPDNWIHINETTTTTC-ANVKGNQQSPINIQTVGTTLTPMDKADGTMSFSGHTCEAFIEFKEGTWEV-VIPDTCT--FQAKIGGTDYKLLQFHFHNAE-HSINFSYMPLEVHLVHAKVDSPKDIA-----VLSVFLAPGASSTFFETLQANEAQAD--PDHPDLATKNKINAYDILPEDHSFWHYVGSLTTP----PCQTEKGQSVN-------WYLFKTPNTLSYSQLYYFTSYFRDLPLSDNGRISRDTQDLVEGTTLFTF 335          
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|655147205|ref|WP_028593964.1| (hypothetical protein [Paenibacillus assamensis])

HSP 1 Score: 92.4337 bits (228), Expect = 4.025e-18
Identity = 77/268 (28.73%), Postives = 117/268 (43.66%), Query Frame = 0
Query:   72 CGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVL 339
             GP +W  +S A +Q C     G QQSPIN+D  E      GK      FS      L    N  + +    +A     TL +DG+ + L Q HFH  S H++NG+ SP+EVH  H        +AD    VL + ++ GKA+   N + ++   + T     ++++ K  +   +LP  KD + Y GSL TPS    C              ++W V     T ST+Q+  +              N+RP+Q +        +GRV+
Sbjct:   46 TGPEHWGDLSEA-YQIC---KVGKQQSPINIDTDETTEHDNGKG-----FSVKYKPSLFTIANNGHTIQ--ANATSTDNTLLIDGKAYYLLQFHFHTPSEHTINGKASPLEVHFVH-------KSADGRLAVLGILIKEGKASSALNEMWSKLPKKET---KTDIKLAKTIDINQILPSDKDSFRYAGSLTTPS----CS-----------EGIKWTVLDDPITMSTNQLKAFQ--------AIFPNNSRPVQPV--------HGRVI 261          
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|952993344|ref|WP_057952041.1| (hypothetical protein [Salinivirga cyanobacteriivorans] >gi|952476711|gb|ALO14500.1| Carbonic anhydrase precursor [Salinivirga cyanobacteriivorans])

HSP 1 Score: 92.4337 bits (228), Expect = 5.328e-18
Identity = 80/266 (30.08%), Postives = 121/266 (45.49%), Query Frame = 0
Query:   73 GPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFN-ILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGR 337
            GP NW  +    F+ C     G +QSPI++   +E  +G  +    ++F  G+    +  N  T + +       K  ++ VDG+ + L Q H+H TS H++ G YSP+EVH  H         AD +  VL +    G+AN LFN  L    AD+G     E+  +        LLP    Y+HY GSL TP     C         S +  V WY+ ++   AS  QI  +++         L +N RP+QE+   T +Y +G 
Sbjct:   63 GPENWANLCEG-FKDC----NGEKQSPIDI---KEAVKG--EDLKPLEFEYGKTKVNIINNGHTVQFNI-----DKGSSMMVDGKKYDLLQFHYHATSEHTIKGEYSPLEVHFVH-------RHADDDFAVLGIMYEEGEANDLFNKYLKHFPADKGEYTSDEKFDLDA------LLPDNLSYYHYGGSLTTP----PC---------SEV--VSWYLLQNPLRASQEQIKDFSE--------ILDKNFRPIQELNGRT-IYKFGE 276          
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|1082509680|gb|OFY48581.1| (hypothetical protein A2W85_09750 [Bacteroidetes bacterium GWF2_41_31])

HSP 1 Score: 88.9669 bits (219), Expect = 6.900e-17
Identity = 66/213 (30.99%), Postives = 92/213 (43.19%), Query Frame = 0
Query:   93 GGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARR-ADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWY 304
            GG  QSPIN+          G     + F+       +E N  T E       C     LT+  + + L Q H+H  S H V+G Y P+EVH  H         +DT+  V+ VF  PG+ N LF    A    ++GT     E+ +        LLP+ K ++HY GSL TP     C              V WYV K++ +AS +QIA +
Sbjct:   60 GGQSQSPINISGSIPNLTLPG-----LDFNYSSTTTEIENNGHTIEF-----VCEAGSELTIGTKTYQLLQFHYHAKSEHQVDGTYYPLEVHFVH-------RASDTDYAVVGVFFEPGEENELFTEFLAHFPTEKGTFTDTTEINLSG------LLPENKSFYHYSGSLTTP----PCS-----------EVVNWYVLKNEISASATQIAQF 234          
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|1180137829|ref|WP_083657213.1| (hypothetical protein [Arcobacter sp. LPB0137])

HSP 1 Score: 87.0409 bits (214), Expect = 2.797e-16
Identity = 75/264 (28.41%), Postives = 113/264 (42.80%), Query Frame = 0
Query:   67 GTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILT----ARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEI 326
            G  E  GP  W  +    ++ C     G  QSPIN+         +      + F G   A   E N  + +VSF GS+     +L +D + + L QIHFH  S + +NG+  P+E H+ H       + +  N  V+ V    G  N + N L       + D+ T+    E+        Y LLP+ KDY+ + GSL TP     C              V+W++ K   + S SQ+   AD+   +P      NNRP+Q+I
Sbjct:   32 GYNEDLGPKEWANLDDK-YRMC---EDGLNQSPINI------TNTIDAVLNPLTFEGNAKASTFENNGHSVKVSFSGSS-----SLNIDNEKYYLKQIHFHTPSENQINGKSFPMEGHLVH-------SNSAGNLAVVGVMFEVGADNMVINKLLRNLPENKDDKNTLKS--EIL------GYDLLPEIKDYYRFSGSLTTP----PCT-----------EGVKWFILKDTVSISKSQL---ADFDAVMP-----TNNRPIQDI 242          
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|1133385439|gb|APW66984.1| (hypothetical protein LPB137_08965 [Arcobacter sp. LPB0137])

HSP 1 Score: 86.6557 bits (213), Expect = 2.965e-16
Identity = 75/264 (28.41%), Postives = 113/264 (42.80%), Query Frame = 0
Query:   67 GTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILT----ARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEI 326
            G  E  GP  W  +    ++ C     G  QSPIN+         +      + F G   A   E N  + +VSF GS+     +L +D + + L QIHFH  S + +NG+  P+E H+ H       + +  N  V+ V    G  N + N L       + D+ T+    E+        Y LLP+ KDY+ + GSL TP     C              V+W++ K   + S SQ+   AD+   +P      NNRP+Q+I
Sbjct:   14 GYNEDLGPKEWANLDDK-YRMC---EDGLNQSPINI------TNTIDAVLNPLTFEGNAKASTFENNGHSVKVSFSGSS-----SLNIDNEKYYLKQIHFHTPSENQINGKSFPMEGHLVH-------SNSAGNLAVVGVMFEVGADNMVINKLLRNLPENKDDKNTLKS--EIL------GYDLLPEIKDYYRFSGSLTTP----PC-----------TEGVKWFILKDTVSISKSQL---ADFDAVMP-----TNNRPIQDI 224          
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|1199731041|ref|WP_087460495.1| (carbonic anhydrase [Oleiphilus messinensis] >gi|1199110919|gb|ARU55379.1| carbonic anhydrase [Oleiphilus messinensis])

HSP 1 Score: 85.5001 bits (210), Expect = 8.924e-16
Identity = 79/253 (31.23%), Postives = 105/253 (41.50%), Query Frame = 0
Query:   73 GPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSF-FGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQ 324
            GP NW  + A  F  C     G  QSPINL  F E           ++F  G     V  N  T +V F  G+A      +TVDGQ + L Q+HFH  S + +NG+  P+E H  H  V       D    V+A+ L  G  N+    L     D  T  G  E    K  N   +LP  +DY+ + GSL TP     C              V+W V K+    S +Q+  ++D   D        NNRP+Q
Sbjct:   31 GPENWSMLHAE-FSAC----SGKNQSPINLTNFIES------ELPPIEFDYGVGGEKVHHNGHTMQVDFPRGNA------ITVDGQAFHLLQVHFHAPSENRINGKSFPMEAHFVHKNV-------DGELAVVALMLEEGSKNK---ALEHVFDDMPTDDGDAETLKFKL-NANHVLPDNRDYYRFNGSLTTP----PCS-----------EGVRWLVLKNSVEVSKAQLERFSDALDD------QTNNRPVQ 234          
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|577756814|gb|EUJ18086.1| (eukaryotic-type carbonic anhydrase family protein [Listeria aquatica FSL S10-1188])

HSP 1 Score: 83.5741 bits (205), Expect = 1.583e-15
Identity = 59/211 (27.96%), Postives = 87/211 (41.23%), Query Frame = 0
Query:  114 KARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQ 324
            K  G+++ +  +       N  + +V   GSA        +DG+ + L Q HFH  S H+VN ++ PIEVH  +          D    V+AVF + GK N  F  +         +  GE+  +    N   ++P  K Y+HY GSL TP                   NV+WYV K+    S +QI  +          Y   NNR +Q
Sbjct:    2 KDEGKIELNYSKTVVDEVDNGHSIQVDDTGSAV-------IDGRKFDLVQFHFHAKSEHTVNDKHYPIEVHFVN-------QAQDGRLAVIAVFFKEGKENAAFQTVL------DNIKAGEKADVADEVNATQMIPANKTYYHYIGSLTTPPLS---------------ENVEWYVMKNPVEVSKAQIVAFN--------KYYDSNNRKIQ 169          
The following BLAST results are available for this feature:
BLAST of EWM20524.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100203|gb|EWM20524.1|0.000e+0100.00Alpha carbonic anhydrase [Nannochloropsis gaditana... [more]
gi|585100204|gb|EWM20525.1|0.000e+089.61Carbonic anhydrase, alpha-class [Nannochloropsis g... [more]
gi|585102601|gb|EWM22174.1|5.780e-3731.27carbonate dehydratase [Nannochloropsis gaditana][more]
gi|655147205|ref|WP_028593964.1|4.025e-1828.73hypothetical protein [Paenibacillus assamensis][more]
gi|952993344|ref|WP_057952041.1|5.328e-1830.08hypothetical protein [Salinivirga cyanobacteriivor... [more]
gi|1082509680|gb|OFY48581.1|6.900e-1730.99hypothetical protein A2W85_09750 [Bacteroidetes ba... [more]
gi|1180137829|ref|WP_083657213.1|2.797e-1628.41hypothetical protein [Arcobacter sp. LPB0137][more]
gi|1133385439|gb|APW66984.1|2.965e-1628.41hypothetical protein LPB137_08965 [Arcobacter sp. ... [more]
gi|1199731041|ref|WP_087460495.1|8.924e-1631.23carbonic anhydrase [Oleiphilus messinensis] >gi|11... [more]
gi|577756814|gb|EUJ18086.1|1.583e-1527.96eukaryotic-type carbonic anhydrase family protein ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10181rna10181Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications