EWM20524.1, cds10150 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|585100203|gb|EWM20524.1| (Alpha carbonic anhydrase [Nannochloropsis gaditana]) HSP 1 Score: 708.753 bits (1828), Expect = 0.000e+0 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 0 Query: 1 MRFLIILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVLK 340 MRFLIILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVLK Sbjct: 1 MRFLIILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVLK 340
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|585100204|gb|EWM20525.1| (Carbonic anhydrase, alpha-class [Nannochloropsis gaditana]) HSP 1 Score: 628.246 bits (1619), Expect = 0.000e+0 Identity = 302/337 (89.61%), Postives = 312/337 (92.58%), Query Frame = 0 Query: 4 LIILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVLK 340 L ILFILPFATFAAFTKQKYTGGLFSDPTQKPQPS+AVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGL+++ TYEV FFG ACRKPFTLTVDGQVWVLWQIH HG S HSVNG YSP+E HM HLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTAR ADEGTVPGG++VRMVKAGNPYWLLPKRKDYWHYQGSL T S +G CQLNPG SFNSTINNVQWYVFKHQQT S SQIAW DY C LPLPYLC +NRPLQEILPETQVYSYG+VLK Sbjct: 6 LCILFILPFATFAAFTKQKYTGGLFSDPTQKPQPSVAVNAWSYYPNTFGTCNGTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARHADEGTVPGGKQVRMVKAGNPYWLLPKRKDYWHYQGSLTTVS-YGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQEILPETQVYSYGKVLK 341
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|585102601|gb|EWM22174.1| (carbonate dehydratase [Nannochloropsis gaditana]) HSP 1 Score: 144.821 bits (364), Expect = 5.780e-37 Identity = 106/339 (31.27%), Postives = 148/339 (43.66%), Query Frame = 0 Query: 7 LFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVN------AWSYYPNT-FGTCN---GTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSY 335 +++ P T FT L P + + ++ +WSY N + C+ +F C E CGP NW +I+ TC G QQSPIN+ + KA G M FSG C +E T+EV C F + G + L Q HFH HS+N Y P+EVH+ H V A VL+VFL PG ++ F L A A P ++ N Y +LP+ +WHY GSL TP CQ G S N WY+FK T S SQ+ ++ Y DLPL R +R Q+++ T ++++ Sbjct: 20 IYLFPQNTMKIFTTSAACLALMMAPLSLIKAATSMEDLEKMESWSYIHNVNYAPCDDADAKSFGCCGKPEDGKERCGPDNWIHINETTTTTC-ANVKGNQQSPINIQTVGTTLTPMDKADGTMSFSGHTCEAFIEFKEGTWEV-VIPDTCT--FQAKIGGTDYKLLQFHFHNAE-HSINFSYMPLEVHLVHAKVDSPKDIA-----VLSVFLAPGASSTFFETLQANEAQAD--PDHPDLATKNKINAYDILPEDHSFWHYVGSLTTP----PCQTEKGQSVN-------WYLFKTPNTLSYSQLYYFTSYFRDLPLSDNGRISRDTQDLVEGTTLFTF 335
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|655147205|ref|WP_028593964.1| (hypothetical protein [Paenibacillus assamensis]) HSP 1 Score: 92.4337 bits (228), Expect = 4.025e-18 Identity = 77/268 (28.73%), Postives = 117/268 (43.66%), Query Frame = 0 Query: 72 CGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGRVL 339 GP +W +S A +Q C G QQSPIN+D E GK FS L N + + +A TL +DG+ + L Q HFH S H++NG+ SP+EVH H +AD VL + ++ GKA+ N + ++ + T ++++ K + +LP KD + Y GSL TPS C ++W V T ST+Q+ + N+RP+Q + +GRV+ Sbjct: 46 TGPEHWGDLSEA-YQIC---KVGKQQSPINIDTDETTEHDNGKG-----FSVKYKPSLFTIANNGHTIQ--ANATSTDNTLLIDGKAYYLLQFHFHTPSEHTINGKASPLEVHFVH-------KSADGRLAVLGILIKEGKASSALNEMWSKLPKKET---KTDIKLAKTIDINQILPSDKDSFRYAGSLTTPS----CS-----------EGIKWTVLDDPITMSTNQLKAFQ--------AIFPNNSRPVQPV--------HGRVI 261
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|952993344|ref|WP_057952041.1| (hypothetical protein [Salinivirga cyanobacteriivorans] >gi|952476711|gb|ALO14500.1| Carbonic anhydrase precursor [Salinivirga cyanobacteriivorans]) HSP 1 Score: 92.4337 bits (228), Expect = 5.328e-18 Identity = 80/266 (30.08%), Postives = 121/266 (45.49%), Query Frame = 0 Query: 73 GPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFN-ILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSYGR 337 GP NW + F+ C G +QSPI++ +E +G + ++F G+ + N T + + K ++ VDG+ + L Q H+H TS H++ G YSP+EVH H AD + VL + G+AN LFN L AD+G E+ + LLP Y+HY GSL TP C S + V WY+ ++ AS QI +++ L +N RP+QE+ T +Y +G Sbjct: 63 GPENWANLCEG-FKDC----NGEKQSPIDI---KEAVKG--EDLKPLEFEYGKTKVNIINNGHTVQFNI-----DKGSSMMVDGKKYDLLQFHYHATSEHTIKGEYSPLEVHFVH-------RHADDDFAVLGIMYEEGEANDLFNKYLKHFPADKGEYTSDEKFDLDA------LLPDNLSYYHYGGSLTTP----PC---------SEV--VSWYLLQNPLRASQEQIKDFSE--------ILDKNFRPIQELNGRT-IYKFGE 276
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|1082509680|gb|OFY48581.1| (hypothetical protein A2W85_09750 [Bacteroidetes bacterium GWF2_41_31]) HSP 1 Score: 88.9669 bits (219), Expect = 6.900e-17 Identity = 66/213 (30.99%), Postives = 92/213 (43.19%), Query Frame = 0 Query: 93 GGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARR-ADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWY 304 GG QSPIN+ G + F+ +E N T E C LT+ + + L Q H+H S H V+G Y P+EVH H +DT+ V+ VF PG+ N LF A ++GT E+ + LLP+ K ++HY GSL TP C V WYV K++ +AS +QIA + Sbjct: 60 GGQSQSPINISGSIPNLTLPG-----LDFNYSSTTTEIENNGHTIEF-----VCEAGSELTIGTKTYQLLQFHYHAKSEHQVDGTYYPLEVHFVH-------RASDTDYAVVGVFFEPGEENELFTEFLAHFPTEKGTFTDTTEINLSG------LLPENKSFYHYSGSLTTP----PCS-----------EVVNWYVLKNEISASATQIAQF 234
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|1180137829|ref|WP_083657213.1| (hypothetical protein [Arcobacter sp. LPB0137]) HSP 1 Score: 87.0409 bits (214), Expect = 2.797e-16 Identity = 75/264 (28.41%), Postives = 113/264 (42.80%), Query Frame = 0 Query: 67 GTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILT----ARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEI 326 G E GP W + ++ C G QSPIN+ + + F G A E N + +VSF GS+ +L +D + + L QIHFH S + +NG+ P+E H+ H + + N V+ V G N + N L + D+ T+ E+ Y LLP+ KDY+ + GSL TP C V+W++ K + S SQ+ AD+ +P NNRP+Q+I Sbjct: 32 GYNEDLGPKEWANLDDK-YRMC---EDGLNQSPINI------TNTIDAVLNPLTFEGNAKASTFENNGHSVKVSFSGSS-----SLNIDNEKYYLKQIHFHTPSENQINGKSFPMEGHLVH-------SNSAGNLAVVGVMFEVGADNMVINKLLRNLPENKDDKNTLKS--EIL------GYDLLPEIKDYYRFSGSLTTP----PCT-----------EGVKWFILKDTVSISKSQL---ADFDAVMP-----TNNRPIQDI 242
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|1133385439|gb|APW66984.1| (hypothetical protein LPB137_08965 [Arcobacter sp. LPB0137]) HSP 1 Score: 86.6557 bits (213), Expect = 2.965e-16 Identity = 75/264 (28.41%), Postives = 113/264 (42.80%), Query Frame = 0 Query: 67 GTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILT----ARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEI 326 G E GP W + ++ C G QSPIN+ + + F G A E N + +VSF GS+ +L +D + + L QIHFH S + +NG+ P+E H+ H + + N V+ V G N + N L + D+ T+ E+ Y LLP+ KDY+ + GSL TP C V+W++ K + S SQ+ AD+ +P NNRP+Q+I Sbjct: 14 GYNEDLGPKEWANLDDK-YRMC---EDGLNQSPINI------TNTIDAVLNPLTFEGNAKASTFENNGHSVKVSFSGSS-----SLNIDNEKYYLKQIHFHTPSENQINGKSFPMEGHLVH-------SNSAGNLAVVGVMFEVGADNMVINKLLRNLPENKDDKNTLKS--EIL------GYDLLPEIKDYYRFSGSLTTP----PC-----------TEGVKWFILKDTVSISKSQL---ADFDAVMP-----TNNRPIQDI 224
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|1199731041|ref|WP_087460495.1| (carbonic anhydrase [Oleiphilus messinensis] >gi|1199110919|gb|ARU55379.1| carbonic anhydrase [Oleiphilus messinensis]) HSP 1 Score: 85.5001 bits (210), Expect = 8.924e-16 Identity = 79/253 (31.23%), Postives = 105/253 (41.50%), Query Frame = 0 Query: 73 GPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSF-FGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQ 324 GP NW + A F C G QSPINL F E ++F G V N T +V F G+A +TVDGQ + L Q+HFH S + +NG+ P+E H H V D V+A+ L G N+ L D T G E K N +LP +DY+ + GSL TP C V+W V K+ S +Q+ ++D D NNRP+Q Sbjct: 31 GPENWSMLHAE-FSAC----SGKNQSPINLTNFIES------ELPPIEFDYGVGGEKVHHNGHTMQVDFPRGNA------ITVDGQAFHLLQVHFHAPSENRINGKSFPMEAHFVHKNV-------DGELAVVALMLEEGSKNK---ALEHVFDDMPTDDGDAETLKFKL-NANHVLPDNRDYYRFNGSLTTP----PCS-----------EGVRWLVLKNSVEVSKAQLERFSDALDD------QTNNRPVQ 234
BLAST of EWM20524.1 vs. NCBI_GenBank
Match: gi|577756814|gb|EUJ18086.1| (eukaryotic-type carbonic anhydrase family protein [Listeria aquatica FSL S10-1188]) HSP 1 Score: 83.5741 bits (205), Expect = 1.583e-15 Identity = 59/211 (27.96%), Postives = 87/211 (41.23%), Query Frame = 0 Query: 114 KARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQ 324 K G+++ + + N + +V GSA +DG+ + L Q HFH S H+VN ++ PIEVH + D V+AVF + GK N F + + GE+ + N ++P K Y+HY GSL TP NV+WYV K+ S +QI + Y NNR +Q Sbjct: 2 KDEGKIELNYSKTVVDEVDNGHSIQVDDTGSAV-------IDGRKFDLVQFHFHAKSEHTVNDKHYPIEVHFVN-------QAQDGRLAVIAVFFKEGKENAAFQTVL------DNIKAGEKADVADEVNATQMIPANKTYYHYIGSLTTPPLS---------------ENVEWYVMKNPVEVSKAQIVAFN--------KYYDSNNRKIQ 169 The following BLAST results are available for this feature:
BLAST of EWM20524.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|