EWM20526.1, cds10147 (CDS) Nannochloropsis gaditana

Overview
NameEWM20526.1
Unique Namecds10147
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:58828..58992 -
Alignment locationKK037264.1:58363..58431 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20526.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100335g1.5842.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:58828..58992 -
KK037264.1supercontigKK037264.1:58363..58431 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20526.1 vs. NCBI_GenBank
Match: gi|585100205|gb|EWM20526.1| (hypothetical protein Naga_100335g1 [Nannochloropsis gaditana])

HSP 1 Score: 152.14 bits (383), Expect = 1.094e-46
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 
Query:    1 MSLRLAIKASLESTETVSGASGGPTKPPGPSSQRPQAGRQVSGAGGTSAGRRKSWPEDLECERGRFQLEPLLCFVLS 77
            MSLRLAIKASLESTETVSGASGGPTKPPGPSSQRPQAGRQVSGAGGTSAGRRKSWPEDLECERGRFQLEPLLCFVLS
Sbjct:    1 MSLRLAIKASLESTETVSGASGGPTKPPGPSSQRPQAGRQVSGAGGTSAGRRKSWPEDLECERGRFQLEPLLCFVLS 77
The following BLAST results are available for this feature:
BLAST of EWM20526.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100205|gb|EWM20526.1|1.094e-46100.00hypothetical protein Naga_100335g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10178rna10178Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications