rna10177, rna10177 (mRNA) Nannochloropsis gaditana

Overview
Namerna10177
Unique Namerna10177
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length901
Alignment locationKK037264.1:54987..56047 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102169g1.3630.mrna
Orig protein idgnl|cribi|Naga_102169g1.3630
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:54987..56047 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_102169g1gene9880Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10177rna10177-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20527.1cds10146Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10177 ID=rna10177|Name=rna10177|organism=Nannochloropsis gaditana|type=mRNA|length=901bp
GAAGGAGGAAGGCAATGAGGAAGGGGAGGAGGAAGCGAAGGAACCTGGAA
GGAAGGAGGGAGGAAATCAGGGCGAGGCAAAAGACGGGATGGAAAGGGCG
ACGACGGGAGAGCAGGACCCTCCGGAAGAAAAGCGCGCATCGGCGTCGAA
CATCCCCATGCTGGCGTCAGAGGCCCAGGCCCCTGCTGGCGTCGTCACTC
CAACGGACGAGGCGGGCATAGAGGGCAAGACCGCGTCGATTTCCCCGGGG
GCCCTTCTGTCCATTGTTCCTCTGGCTCCCGCCTTTCCCTCCACCCTTCC
CCCCTCCCCTCACCCCACTCTGACAATACTCTCCACGGGCTCGGACAAGG
GCCAGCCCACCGTGCGCGTGGAGGAGAAGGAGGGAGCAGAGGCGGCCGGC
GGGAGTATTGGGGAGGGAGGGATGAAGGTGGGTAGTGAGAAGGAGGAGGA
CGGGCGAGGGGCGGTGGGTATGGACGTGGCATGAAGAGGGGTTGAAGGCT
GCGAAAGGGAAGAACACGGGCTGGCGTGGCCTCGAAGGGAGAGGCCTCGG
AACATCTCAAGGGGGCGAAGGTGAGGGAGGGGGTACGAAGAGGATGAGGA
AGCGCGAAGAGGAAAAAGGGGCACCGCCGATAGAGAGGGAGGGAGGGAGG
GAGGGAGGGTCATCAAGGGAGGGAGCCGTGGGGGAGGCGTGTACATGTGT
GTATGTGGATGTGATAAATGAACCAAAAGCACAAAGAAGCCAAGGATGGG
GAATGACAAGCGTTGTCGAAGACTGGAGAGAGAGCAAGAACAAGCAGTTA
AGGTTTGGGTGCGAGGGATGAAAAGCGCGGACGCGGAATTCCGAGTCGTG
CCTCCCTGATCCCTTCTCATGTTCCTGACAGAAACATAGCCTCATCGTTG
A
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protein sequence of rna10177

>rna10177-protein ID=rna10177-protein|Name=rna10177|organism=Nannochloropsis gaditana|type=polypeptide|length=196bp
MGPSTALAEATNTHERLRVERGIVLGVLVEAKGRPLTKSMLDAVIHARRY
ACPLWESVRMGMVEEKDRLDEALSLLVADKVLHRTLRPRHPLPSPTEPPG
GKKGGKKLAYFSLVHPTCAPAAHAEEKEGVETHASAAAVVADAPDPQALM
TSRPPKARKLWRRSGAATAIAALLQLREDGGGQGRERGNGRERGGG
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mRNA from alignment at KK037264.1:54987..56047-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10177 ID=rna10177|Name=rna10177|organism=Nannochloropsis gaditana|type=mRNA|length=1061bp|location=Sequence derived from alignment at KK037264.1:54987..56047- (Nannochloropsis gaditana)
CATTTCCCCAGGCGTGGGCGGCCATGGGCCCTTCCACGGCTCTGGCGGAG
GCGACCAACACCCACGAAAGGCTCCGCGTGGAGCGAGGGATCGTCCTGGG
CGTGCTGGTGGAGGCCAAGGGCCGACCGCTGACCAAGAGCATGCTGGACG
CAGGTAAGCGTGCAGGCGAGGGTCGATCTCGGCCCTTCCTCCCTCCTTCT
CTCCTTCCCTCCCTCCCTTGTCCGGGCTGGCGCTGGTCTCCTGTCTCGAT
TTTCTTGACCCGTCGTCTTACCTCCCCCTCTCTCCCTCCCTCCTTTTCCC
TCCCTCTCTCCCTCCTTTTCCCTCCCTCCAGTCATCCACGCACGTCGGTA
CGCGTGTCCCCTCTGGGAAAGCGTCCGCATGGGCATGGTGGAGGAAAAGG
ACCGTCTGGACGAGGCCCTCTCTCTCCTTGTCGCGGACAAGGTCCTGCAC
CGAACCCTCCGGCCCCGCCACCCCCTGCCCTCGCCCACGGAGCCGCCGGG
GGGGAAAAAAGGCGGGAAAAAGCTCGCGTATTTTTCCTTGGTCCACCCTA
CTTGCGCCCCTGCGGCGCATGCCGAGGAAAAGGAAGGTGTGGAGACGCAT
GCCTCCGCCGCGGCGGTCGTGGCGGATGCCCCTGATCCCCAGGCGCTGAT
GACGTCCCGCCCTCCCAAGGCGCGTAAGCTCTGGCGGAGGTCGGGGGCGG
CCACGGCAATCGCAGCGCTTCTTCAGTTGAGGGAAGACGGAGGGGGGCAA
GGGAGGGAAAGAGGGAACGGGAGGGAGAGAGGAGGGGGATGACATGCTTG
TAGTGGAGGGGGAAGACGAGGAAGAAGAAGAAGAAGAGGAGGAGGAGGAG
GAGGAGGAGGGAGGGGAAGCGGTGGCAGGAAGAGAAGCGCAAGAGACTTT
GCAACGTGAAAGGGAAGAGGAAGCCGCGGCAGCTGTGGTGGCAATGATGA
GAATGGAGGAAGGGAAGGAGGAAGGGAAGGAGGAAAGGAAGGAGAAAAGG
AGGGAGGAAGAGAAGAAGGGAGGGGAAGAGGAAGTAAAGGTAGGAGGGAA
GGAGGAAGAGA
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Coding sequence (CDS) from alignment at KK037264.1:54987..56047-

>rna10177 ID=rna10177|Name=rna10177|organism=Nannochloropsis gaditana|type=CDS|length=1182bp|location=Sequence derived from alignment at KK037264.1:54987..56047- (Nannochloropsis gaditana)
TCATCCACGCACGTCGGTACGCGTGTCCCCTCTGGGAAAGCGTCCGCATG
GGCATGGTGGAGGAAAAGGACCGTCTGGACGAGGCCCTCTCTCTCCTTGT
CGCGGACAAGGTCCTGCACCGAACCCTCCGGCCCCGCCACCCCCTGCCCT
CGCCCACGGAGCCGCCGGGGGGGAAAAAAGGCGGGAAAAAGCTCGCGTAT
TTTTCCTTGGTCCACCCTACTTGCGCCCCTGCGGCGCATGCCGAGGAAAA
GGAAGGTGTGGAGACGCATGCCTCCGCCGCGGCGGTCGTGGCGGATGCCC
CTGATCCCCAGGCGCTGATGACGTCCCGCCCTCCCAAGGCGCGTAAGCTC
TGGCGGAGGTCGGGGGCGGCCACGGCAATCGCAGCGCTTCTTCAGTTGAG
GGAAGACGGAGGGGGGCAAGGGAGGGAAAGAGGGAACGGGAGGGAGAGAG
GAGGGGGATGAATGGGCCCTTCCACGGCTCTGGCGGAGGCGACCAACACC
CACGAAAGGCTCCGCGTGGAGCGAGGGATCGTCCTGGGCGTGCTGGTGGA
GGCCAAGGGCCGACCGCTGACCAAGAGCATGCTGGACGCAGTCATCCACG
CACGTCGGTACGCGTGTCCCCTCTGGGAAAGCGTCCGCATGGGCATGGTG
GAGGAAAAGGACCGTCTGGACGAGGCCCTCTCTCTCCTTGTCGCGGACAA
GGTCCTGCACCGAACCCTCCGGCCCCGCCACCCCCTGCCCTCGCCCACGG
AGCCGCCGGGGGGGAAAAAAGGCGGGAAAAAGCTCGCGTATTTTTCCTTG
GTCCACCCTACTTGCGCCCCTGCGGCGCATGCCGAGGAAAAGGAAGGTGT
GGAGACGCATGCCTCCGCCGCGGCGGTCGTGGCGGATGCCCCTGATCCCC
AGGCGCTGATGACGTCCCGCCCTCCCAAGGCGCGTAAGCTCTGGCGGAGG
TCGGGGGCGGCCACGGCAATCGCAGCGCTTCTTCAGTTGAGGGAAGACGG
AGGGGGGCAAGGGAGGGAAAGAGGGAACGGGAGGGAGAGAGGAGGGGGAT
GAATGGGCCCTTCCACGGCTCTGGCGGAGGCGACCAACACCCACGAAAGG
CTCCGCGTGGAGCGAGGGATCGTCCTGGGCGTGCTGGTGGAGGCCAAGGG
CCGACCGCTGACCAAGAGCATGCTGGACGCAG
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Synonyms
Publications