EWM20542.1, cds10131 (CDS) Nannochloropsis gaditana

Overview
NameEWM20542.1
Unique Namecds10131
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:25090..25137 +
Alignment locationKK037264.1:25371..25502 +
Alignment locationKK037264.1:25684..25848 +
Alignment locationKK037264.1:26075..26251 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20542.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100683g1.6891.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:25090..25137 +
KK037264.1supercontigKK037264.1:25371..25502 +
KK037264.1supercontigKK037264.1:25684..25848 +
KK037264.1supercontigKK037264.1:26075..26251 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20542.1 vs. NCBI_GenBank
Match: gi|585100232|gb|EWM20542.1| (hypothetical protein Naga_100683g1 [Nannochloropsis gaditana])

HSP 1 Score: 353.984 bits (907), Expect = 1.343e-123
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0 
Query:    1 MFSTNDLEMPIAACDEPQVSSPREGGFESSSFQRRRCSTTGSFGPPDVERPHRGIHRFWKDFDRRYMKPTFGGQGEGEEEGPYSEREGGRGEGAEEEEDLLVCARASEQAGEKVQDYIEQRYNHPKLPKPPGLPSQQQPPTRFQSGGSDSWLDGSGLASEANNSNSNNGFNAS 173
            MFSTNDLEMPIAACDEPQVSSPREGGFESSSFQRRRCSTTGSFGPPDVERPHRGIHRFWKDFDRRYMKPTFGGQGEGEEEGPYSEREGGRGEGAEEEEDLLVCARASEQAGEKVQDYIEQRYNHPKLPKPPGLPSQQQPPTRFQSGGSDSWLDGSGLASEANNSNSNNGFNAS
Sbjct:    1 MFSTNDLEMPIAACDEPQVSSPREGGFESSSFQRRRCSTTGSFGPPDVERPHRGIHRFWKDFDRRYMKPTFGGQGEGEEEGPYSEREGGRGEGAEEEEDLLVCARASEQAGEKVQDYIEQRYNHPKLPKPPGLPSQQQPPTRFQSGGSDSWLDGSGLASEANNSNSNNGFNAS 173
[Close]
BLAST of EWM20542.1 vs. NCBI_GenBank
Match: gi|553190513|ref|XP_005855205.1| (hypothetical protein NGA_0073100 [Nannochloropsis gaditana CCMP526] >gi|422293851|gb|EKU21151.1| hypothetical protein NGA_0073100 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 214.927 bits (546), Expect = 1.360e-69
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 
Query:   67 MKPTFGGQGEGEEEGPYSEREGGRGEGAEEEEDLLVCARASEQAGEKVQDYIEQRYNHPKLPKPPGLPSQQQPPTRFQSGGSDSWLDGSGLASEANNSNSNNGFNAS 173
            MKPTFGGQGEGEEEGPYSEREGGRGEGAEEEEDLLVCARASEQAGEKVQDYIEQRYNHPKLPKPPGLPSQQQPPTRFQSGGSDSWLDGSGLASEANNSNSNNGFNAS
Sbjct:    1 MKPTFGGQGEGEEEGPYSEREGGRGEGAEEEEDLLVCARASEQAGEKVQDYIEQRYNHPKLPKPPGLPSQQQPPTRFQSGGSDSWLDGSGLASEANNSNSNNGFNAS 107
The following BLAST results are available for this feature:
BLAST of EWM20542.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585100232|gb|EWM20542.1|1.343e-123100.00hypothetical protein Naga_100683g1 [Nannochloropsi... [more]
gi|553190513|ref|XP_005855205.1|1.360e-69100.00hypothetical protein NGA_0073100 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10162rna10162Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications