EWM20550.1, cds10122 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|585100247|gb|EWM20550.1| (oligopeptidase a [Nannochloropsis gaditana]) HSP 1 Score: 150.984 bits (380), Expect = 2.027e-46 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 Query: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLAKEGECAATH 73 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLAKEGECAATH Sbjct: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLAKEGECAATH 73
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|397613714|gb|EJK62386.1| (hypothetical protein THAOC_17004, partial [Thalassiosira oceanica]) HSP 1 Score: 106.686 bits (265), Expect = 3.008e-25 Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 0 Query: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLA 64 MSADAF AFEEVGLDNEE VQEVGRRFR TVL++GGG P +V++ FRGR+P PDALLRH+GLA Sbjct: 817 MSADAFGAFEEVGLDNEEGVQEVGRRFRDTVLSLGGGVAPMDVFKQFRGREPNPDALLRHNGLA 880
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|937906686|dbj|BAS81740.1| (Os02g0830100, partial [Oryza sativa Japonica Group]) HSP 1 Score: 99.3673 bits (246), Expect = 3.102e-25 Identity = 44/63 (69.84%), Postives = 56/63 (88.89%), Query Frame = 0 Query: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGL 63 +SADAFSAFE+VGLDNE+ ++E GRRFR+TVLA+GGG P EV+ +FRGR+P P+ALLRH+GL Sbjct: 66 LSADAFSAFEDVGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVSFRGREPSPEALLRHNGL 128
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|676384121|ref|XP_009035339.1| (hypothetical protein AURANDRAFT_36649 [Aureococcus anophagefferens] >gi|323454686|gb|EGB10556.1| hypothetical protein AURANDRAFT_36649 [Aureococcus anophagefferens]) HSP 1 Score: 105.145 bits (261), Expect = 9.508e-25 Identity = 48/65 (73.85%), Postives = 58/65 (89.23%), Query Frame = 0 Query: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLAK 65 +SADAF+AFEEVGLDNE +V+ +G +FR TVLA+GGGTPP+EV+ AFRGR P PDALLRHSGLA+ Sbjct: 597 LSADAFAAFEEVGLDNEAEVKALGGKFRDTVLALGGGTPPAEVFRAFRGRDPSPDALLRHSGLAE 661
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|1210523094|dbj|GAX18145.1| (oligopeptidase A [Fistulifera solaris]) HSP 1 Score: 104.76 bits (260), Expect = 1.238e-24 Identity = 46/63 (73.02%), Postives = 58/63 (92.06%), Query Frame = 0 Query: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGL 63 MSADAF+AFEEVGLDNEE+V++VGR+FR TVL++GGG P EV++ FRGR+P+PDALLRH+GL Sbjct: 689 MSADAFAAFEEVGLDNEEEVKKVGRKFRDTVLSLGGGVEPMEVFKQFRGREPRPDALLRHNGL 751
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|219110915|ref|XP_002177209.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411744|gb|EEC51672.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 103.99 bits (258), Expect = 2.280e-24 Identity = 46/64 (71.88%), Postives = 57/64 (89.06%), Query Frame = 0 Query: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLA 64 MSADAFSAFEEVGLDNEE+V++VGR+FR TVL++GGG P +V++ FRGR+P PDALLRH+GL Sbjct: 663 MSADAFSAFEEVGLDNEEEVKKVGRKFRDTVLSLGGGVDPMQVFKQFRGREPTPDALLRHNGLV 726
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|224010838|ref|XP_002294376.1| (oligopeptidase [Thalassiosira pseudonana CCMP1335] >gi|220969871|gb|EED88210.1| oligopeptidase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 103.99 bits (258), Expect = 2.534e-24 Identity = 47/64 (73.44%), Postives = 56/64 (87.50%), Query Frame = 0 Query: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLA 64 MSADAF AFEEVGLDNEE V+EVG++FR TVL++GGG PSEV++ FRGR P P+ALLRH+GLA Sbjct: 653 MSADAFGAFEEVGLDNEEAVKEVGKKFRDTVLSLGGGVAPSEVFKKFRGRDPSPEALLRHNGLA 716
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|1210527501|dbj|GAX13786.1| (oligopeptidase A [Fistulifera solaris]) HSP 1 Score: 102.064 bits (253), Expect = 1.171e-23 Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = 0 Query: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLA 64 MSADAFSAFEEVGLDNEE V++VG +FR+TVL++GGG P EV++ FRGR+P PDALLRH+G A Sbjct: 685 MSADAFSAFEEVGLDNEEAVRQVGMKFRETVLSLGGGENPMEVFKQFRGREPSPDALLRHNGFA 748
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|1210531356|dbj|GAX10024.1| (oligopeptidase A [Fistulifera solaris]) HSP 1 Score: 101.679 bits (252), Expect = 1.905e-23 Identity = 45/63 (71.43%), Postives = 57/63 (90.48%), Query Frame = 0 Query: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGL 63 MSADAF+AFEEVGLDNEE+V++VGR+FR TVL++GGG P EV++ FRGR+P+P ALLRH+GL Sbjct: 686 MSADAFAAFEEVGLDNEEEVKKVGRKFRDTVLSLGGGVDPMEVFKQFRGREPRPGALLRHNGL 748
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|937906685|dbj|BAS81739.1| (Os02g0830100, partial [Oryza sativa Japonica Group]) HSP 1 Score: 99.3673 bits (246), Expect = 1.920e-23 Identity = 44/63 (69.84%), Postives = 56/63 (88.89%), Query Frame = 0 Query: 1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGL 63 +SADAFSAFE+VGLDNE+ ++E GRRFR+TVLA+GGG P EV+ +FRGR+P P+ALLRH+GL Sbjct: 251 LSADAFSAFEDVGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVSFRGREPSPEALLRHNGL 313 The following BLAST results are available for this feature:
BLAST of EWM20550.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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