EWM20550.1, cds10122 (CDS) Nannochloropsis gaditana

Overview
NameEWM20550.1
Unique Namecds10122
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037264.1:6098..6184 +
Alignment locationKK037264.1:6432..6566 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20550.1
Productoligopeptidase a
Orig transcript idgnl|cribi|Naga_100807g1.7978.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037264.1supercontigKK037264.1:6098..6184 +
KK037264.1supercontigKK037264.1:6432..6566 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
GO:0004222metalloendopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0019538protein metabolic process
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR001567Pept_M3A_M3B
IPR024077Neurolysin/TOP_dom2
Homology
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|585100247|gb|EWM20550.1| (oligopeptidase a [Nannochloropsis gaditana])

HSP 1 Score: 150.984 bits (380), Expect = 2.027e-46
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
Query:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLAKEGECAATH 73
            MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLAKEGECAATH
Sbjct:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLAKEGECAATH 73          
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|397613714|gb|EJK62386.1| (hypothetical protein THAOC_17004, partial [Thalassiosira oceanica])

HSP 1 Score: 106.686 bits (265), Expect = 3.008e-25
Identity = 49/64 (76.56%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLA 64
            MSADAF AFEEVGLDNEE VQEVGRRFR TVL++GGG  P +V++ FRGR+P PDALLRH+GLA
Sbjct:  817 MSADAFGAFEEVGLDNEEGVQEVGRRFRDTVLSLGGGVAPMDVFKQFRGREPNPDALLRHNGLA 880          
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|937906686|dbj|BAS81740.1| (Os02g0830100, partial [Oryza sativa Japonica Group])

HSP 1 Score: 99.3673 bits (246), Expect = 3.102e-25
Identity = 44/63 (69.84%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGL 63
            +SADAFSAFE+VGLDNE+ ++E GRRFR+TVLA+GGG  P EV+ +FRGR+P P+ALLRH+GL
Sbjct:   66 LSADAFSAFEDVGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVSFRGREPSPEALLRHNGL 128          
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|676384121|ref|XP_009035339.1| (hypothetical protein AURANDRAFT_36649 [Aureococcus anophagefferens] >gi|323454686|gb|EGB10556.1| hypothetical protein AURANDRAFT_36649 [Aureococcus anophagefferens])

HSP 1 Score: 105.145 bits (261), Expect = 9.508e-25
Identity = 48/65 (73.85%), Postives = 58/65 (89.23%), Query Frame = 0
Query:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLAK 65
            +SADAF+AFEEVGLDNE +V+ +G +FR TVLA+GGGTPP+EV+ AFRGR P PDALLRHSGLA+
Sbjct:  597 LSADAFAAFEEVGLDNEAEVKALGGKFRDTVLALGGGTPPAEVFRAFRGRDPSPDALLRHSGLAE 661          
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|1210523094|dbj|GAX18145.1| (oligopeptidase A [Fistulifera solaris])

HSP 1 Score: 104.76 bits (260), Expect = 1.238e-24
Identity = 46/63 (73.02%), Postives = 58/63 (92.06%), Query Frame = 0
Query:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGL 63
            MSADAF+AFEEVGLDNEE+V++VGR+FR TVL++GGG  P EV++ FRGR+P+PDALLRH+GL
Sbjct:  689 MSADAFAAFEEVGLDNEEEVKKVGRKFRDTVLSLGGGVEPMEVFKQFRGREPRPDALLRHNGL 751          
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|219110915|ref|XP_002177209.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411744|gb|EEC51672.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 103.99 bits (258), Expect = 2.280e-24
Identity = 46/64 (71.88%), Postives = 57/64 (89.06%), Query Frame = 0
Query:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLA 64
            MSADAFSAFEEVGLDNEE+V++VGR+FR TVL++GGG  P +V++ FRGR+P PDALLRH+GL 
Sbjct:  663 MSADAFSAFEEVGLDNEEEVKKVGRKFRDTVLSLGGGVDPMQVFKQFRGREPTPDALLRHNGLV 726          
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|224010838|ref|XP_002294376.1| (oligopeptidase [Thalassiosira pseudonana CCMP1335] >gi|220969871|gb|EED88210.1| oligopeptidase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 103.99 bits (258), Expect = 2.534e-24
Identity = 47/64 (73.44%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLA 64
            MSADAF AFEEVGLDNEE V+EVG++FR TVL++GGG  PSEV++ FRGR P P+ALLRH+GLA
Sbjct:  653 MSADAFGAFEEVGLDNEEAVKEVGKKFRDTVLSLGGGVAPSEVFKKFRGRDPSPEALLRHNGLA 716          
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|1210527501|dbj|GAX13786.1| (oligopeptidase A [Fistulifera solaris])

HSP 1 Score: 102.064 bits (253), Expect = 1.171e-23
Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGLA 64
            MSADAFSAFEEVGLDNEE V++VG +FR+TVL++GGG  P EV++ FRGR+P PDALLRH+G A
Sbjct:  685 MSADAFSAFEEVGLDNEEAVRQVGMKFRETVLSLGGGENPMEVFKQFRGREPSPDALLRHNGFA 748          
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|1210531356|dbj|GAX10024.1| (oligopeptidase A [Fistulifera solaris])

HSP 1 Score: 101.679 bits (252), Expect = 1.905e-23
Identity = 45/63 (71.43%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGL 63
            MSADAF+AFEEVGLDNEE+V++VGR+FR TVL++GGG  P EV++ FRGR+P+P ALLRH+GL
Sbjct:  686 MSADAFAAFEEVGLDNEEEVKKVGRKFRDTVLSLGGGVDPMEVFKQFRGREPRPGALLRHNGL 748          
BLAST of EWM20550.1 vs. NCBI_GenBank
Match: gi|937906685|dbj|BAS81739.1| (Os02g0830100, partial [Oryza sativa Japonica Group])

HSP 1 Score: 99.3673 bits (246), Expect = 1.920e-23
Identity = 44/63 (69.84%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MSADAFSAFEEVGLDNEEKVQEVGRRFRQTVLAMGGGTPPSEVYEAFRGRQPKPDALLRHSGL 63
            +SADAFSAFE+VGLDNE+ ++E GRRFR+TVLA+GGG  P EV+ +FRGR+P P+ALLRH+GL
Sbjct:  251 LSADAFSAFEDVGLDNEKAIEETGRRFRETVLALGGGKSPLEVFVSFRGREPSPEALLRHNGL 313          
The following BLAST results are available for this feature:
BLAST of EWM20550.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100247|gb|EWM20550.1|2.027e-46100.00oligopeptidase a [Nannochloropsis gaditana][more]
gi|397613714|gb|EJK62386.1|3.008e-2576.56hypothetical protein THAOC_17004, partial [Thalass... [more]
gi|937906686|dbj|BAS81740.1|3.102e-2569.84Os02g0830100, partial [Oryza sativa Japonica Group... [more]
gi|676384121|ref|XP_009035339.1|9.508e-2573.85hypothetical protein AURANDRAFT_36649 [Aureococcus... [more]
gi|1210523094|dbj|GAX18145.1|1.238e-2473.02oligopeptidase A [Fistulifera solaris][more]
gi|219110915|ref|XP_002177209.1|2.280e-2471.88predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|224010838|ref|XP_002294376.1|2.534e-2473.44oligopeptidase [Thalassiosira pseudonana CCMP1335]... [more]
gi|1210527501|dbj|GAX13786.1|1.171e-2371.88oligopeptidase A [Fistulifera solaris][more]
gi|1210531356|dbj|GAX10024.1|1.905e-2371.43oligopeptidase A [Fistulifera solaris][more]
gi|937906685|dbj|BAS81739.1|1.920e-2369.84Os02g0830100, partial [Oryza sativa Japonica Group... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10153rna10153Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications