EWM20633.1, cds10040 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20633.1 vs. NCBI_GenBank
Match: gi|585100420|gb|EWM20633.1| (myotubularin-related family protein [Nannochloropsis gaditana]) HSP 1 Score: 764.992 bits (1974), Expect = 0.000e+0 Identity = 393/393 (100.00%), Postives = 393/393 (100.00%), Query Frame = 0 Query: 1 MQVSNHFHPLTGSSPSCSPSFSPSNSRPPKRSFLCVSSISWWSWAWTRRRCRGRTGGRAGQRGVKGQVVGRLRLRRFPNPSCLLPLQAMLTHVPSSSSASSSQPVFSFTSSFAASPSPQKSRSLTQLPSLPPSLASPSTGILPNDSQASLTSLSSPSSTTRSLAALPSFQPSSPCPSLPLTSPTSFPPSLPPSLAPDETHMACKVLDAYPTASHYAQGEGKEAVKVPDHVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEEVSTLPHPAKTQTALGRAFQEAGLPLPSWVQSGNFFVPKALVILSHYPFFNTFREVGPQASRRDLSFLFLIPAFIPPSALPSIPFSLRSSLSSTASPSPLLPSPSSATSPIFSAKCPCPPR 393 MQVSNHFHPLTGSSPSCSPSFSPSNSRPPKRSFLCVSSISWWSWAWTRRRCRGRTGGRAGQRGVKGQVVGRLRLRRFPNPSCLLPLQAMLTHVPSSSSASSSQPVFSFTSSFAASPSPQKSRSLTQLPSLPPSLASPSTGILPNDSQASLTSLSSPSSTTRSLAALPSFQPSSPCPSLPLTSPTSFPPSLPPSLAPDETHMACKVLDAYPTASHYAQGEGKEAVKVPDHVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEEVSTLPHPAKTQTALGRAFQEAGLPLPSWVQSGNFFVPKALVILSHYPFFNTFREVGPQASRRDLSFLFLIPAFIPPSALPSIPFSLRSSLSSTASPSPLLPSPSSATSPIFSAKCPCPPR Sbjct: 1 MQVSNHFHPLTGSSPSCSPSFSPSNSRPPKRSFLCVSSISWWSWAWTRRRCRGRTGGRAGQRGVKGQVVGRLRLRRFPNPSCLLPLQAMLTHVPSSSSASSSQPVFSFTSSFAASPSPQKSRSLTQLPSLPPSLASPSTGILPNDSQASLTSLSSPSSTTRSLAALPSFQPSSPCPSLPLTSPTSFPPSLPPSLAPDETHMACKVLDAYPTASHYAQGEGKEAVKVPDHVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEEVSTLPHPAKTQTALGRAFQEAGLPLPSWVQSGNFFVPKALVILSHYPFFNTFREVGPQASRRDLSFLFLIPAFIPPSALPSIPFSLRSSLSSTASPSPLLPSPSSATSPIFSAKCPCPPR 393
BLAST of EWM20633.1 vs. NCBI_GenBank
Match: gi|553194020|ref|XP_005855876.1| (denn domain-containing protein 4b, partial [Nannochloropsis gaditana CCMP526] >gi|422293185|gb|EKU20485.1| denn domain-containing protein 4b, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 122.094 bits (305), Expect = 1.132e-29 Identity = 61/81 (75.31%), Postives = 63/81 (77.78%), Query Frame = 0 Query: 258 MDGTRTYGCVLHLCEEVSTLPHPAKTQTALGRAFQEAGLPLPSWVQSGNFFVPKALVILSHYPFFNTFREVGPQASRRDLS 338 MDGTRTYGCVLHLCEEVSTLPHPAKTQ ALGRAF QSGNFFVPKALVILSHYPFFNTFREV + R +S Sbjct: 1 MDGTRTYGCVLHLCEEVSTLPHPAKTQAALGRAF-----------QSGNFFVPKALVILSHYPFFNTFREVLLELYRISIS 70
BLAST of EWM20633.1 vs. NCBI_GenBank
Match: gi|299117591|emb|CBN75433.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 95.5153 bits (236), Expect = 1.712e-17 Identity = 79/261 (30.27%), Postives = 121/261 (46.36%), Query Frame = 0 Query: 151 TSLSSPSSTTRSLAALPSFQPSSPCPSLPLTSPTSF--PPSLPPSLAPDETHMACKVLDAYPTA-SHYAQGEGKEAVKVPDHVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEE---------VSTLPHPAKTQTALGRAFQEAGLPLPSWVQSGNFFVPKALVILSHYPFFNTFREVGPQASRRDLS------------FLFLIPAFIPPSALPSIPFSL-RSSLSSTASPSPLLPSPSSATSPIFSA 386 T SP+S +++L P + P F + P AP++ + +VLD +P A SH+ +P+H+ QFV+PDG L ++E PP+ F F+LT+ G + +G VLH+ EE VS + P +T RA AG P + PKALV+LSHYPF+N F + Q R LS F+ +P +PP + ++L +L+ T P LP + P+F++ Sbjct: 121 TGYQSPASLSQTL-------PIRLVDYFVVVGPGGFMLDDRINPESAPEDVEIREEVLDCFPEADSHHG-------YPMPEHLPQFVFPDGMRLHSQEKPPTTFPFILTNSCGLKMHGVVLHVTEEIDSHNVGGMVSQMATPERT-GGDERARARAGHEYP------QLYAPKALVLLSHYPFYNLFTQFLQQIYRIGLSEAPLPIERYISNFVCEVP--LPPQGQVEVNYALPDRTLTITRPPRNRLPLVDFSYRPLFAS 358
BLAST of EWM20633.1 vs. NCBI_GenBank
Match: gi|1173942286|gb|OQR91311.1| (hypothetical protein THRCLA_09040 [Thraustotheca clavata]) HSP 1 Score: 85.1149 bits (209), Expect = 4.344e-14 Identity = 55/165 (33.33%), Postives = 82/165 (49.70%), Query Frame = 0 Query: 193 SLAPDETHMACKVLDAYPTASHYAQGEGKEAVKVPDHVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEEVSTLP---------HPAKTQTALGRAFQEAGLPLPSWVQ-----SGN-----FFVPKALVILSHYPFFNTFREVGPQASRRDLS 338 SL PD+ +LD++P A +P H++QF +P+GFSL + P+FFSFVLT++ G + Y C L EE++ L + +KT T +P+W Q +GN F PK L+++SH+PFF++FR Q R LS Sbjct: 172 SLGPDDVQFVPTILDSFPDPHSDA--------PLPSHISQFAFPEGFSLSSTHQSPTFFSFVLTNVSGAKLYACALKFYEELTPLEVISLFAVPQNDSKTTT------------IPTWAQELSSGTGNGTATSVFCPKCLIVISHHPFFSSFRHFLQQIYRISLS 316
BLAST of EWM20633.1 vs. NCBI_GenBank
Match: gi|695374637|ref|XP_009515344.1| (hypothetical protein PHYSODRAFT_468694 [Phytophthora sojae] >gi|348688255|gb|EGZ28069.1| hypothetical protein PHYSODRAFT_468694 [Phytophthora sojae]) HSP 1 Score: 73.9442 bits (180), Expect = 1.549e-10 Identity = 52/179 (29.05%), Postives = 74/179 (41.34%), Query Frame = 0 Query: 189 SLPPSLAPDETHMACKVLDAYPTASHYAQGEGKEAVKVPDHVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEEVSTLPHPAKTQTALG--------------------RAFQEAGLPLPSWVQS---------GNFFVPKALVILSHYPFFNTFREVGPQASRRDLS 338 ++ + +P E VLD +P YA +P H+ +F +P+GF L P FFSFVLT++ G + Y C L EE+ HP + + + LP WVQ G F PK +V+ SHYP+F+ FR+ Q R LS Sbjct: 236 NIEKTKSPTEIRFLPAVLDMFPEM--YADSP------LPAHIGEFAFPEGFVLSKSYVAPVFFSFVLTNVSGVKIYACALRFYEEL----HPLEVVSLIAPHYHRQRHRRRPSNGPHQPDENDDNQRTQLPQWVQDLSGDVSSAPGPVFCPKCIVVTSHYPYFSAFRQFLQQIYRVTLS 402
BLAST of EWM20633.1 vs. NCBI_GenBank
Match: gi|301117184|ref|XP_002906320.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107669|gb|EEY65721.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 73.9442 bits (180), Expect = 1.602e-10 Identity = 47/144 (32.64%), Postives = 61/144 (42.36%), Query Frame = 0 Query: 226 VPDHVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEEV----------------------STLPHPAKTQTALGRAFQEAGLPLPSWVQS---------GNFFVPKALVILSHYPFFNTFREVGPQASRRDLS 338 +P H+A F +P+GF L P FFSFVLT+M G + Y C L EE+ S +PH + R LP WVQ G F PK +V+ S YP+F+ FR+ Q R LS Sbjct: 250 LPAHLADFAFPEGFVLSKSYVAPVFFSFVLTNMSGVKIYACALKFYEELHPLEVVSLIAPHYHRQRHRRRPSNVPHQLDEKDDNQRT------QLPQWVQDLSGDAASAPGPVFCPKGIVVTSLYPYFSAFRQFLQQIYRVTLS 387
BLAST of EWM20633.1 vs. NCBI_GenBank
Match: gi|813226889|ref|XP_012212521.1| (hypothetical protein SPRG_17723 [Saprolegnia parasitica CBS 223.65] >gi|641520801|gb|KDO16772.1| hypothetical protein SPRG_17723 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 73.559 bits (179), Expect = 1.905e-10 Identity = 48/166 (28.92%), Postives = 77/166 (46.39%), Query Frame = 0 Query: 190 LPPSLAPDETHMACKVLDAYPTASHYAQGEGKEAVKVPDHVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEEVSTL---------PHPAKTQTALGRAFQEAGLPLPSWVQ--------SGNFFVPKALVILSHYPFFNTFREVGPQASRRDLS 338 L + P + +LD++P A A +P H++QF +P+G +L P+FF+FVLT++ G + Y C L EE+S L P KT+ + +P W Q + + + PK L+++SH+PFF+ +R Q R LS Sbjct: 176 LGENAGPSDVQFVPTILDSFPDAHADA--------PLPSHISQFAFPEGLALSQTHITPTFFTFVLTNVSGAKLYACALKFVEELSPLEVLTLFAPPPGNEKTKAPI----------IPKWAQDLSAGSASTTSVYSPKCLLLISHHPFFSGYRLFLQQIYRLSLS 323
BLAST of EWM20633.1 vs. NCBI_GenBank
Match: gi|673037554|ref|XP_008872738.1| (hypothetical protein H310_08666 [Aphanomyces invadans] >gi|574471534|gb|ETV98541.1| hypothetical protein H310_08666 [Aphanomyces invadans]) HSP 1 Score: 72.4034 bits (176), Expect = 5.573e-10 Identity = 42/118 (35.59%), Postives = 60/118 (50.85%), Query Frame = 0 Query: 229 HVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEEVSTLPHPAKTQTALGRAFQEAGLPLPSWV--------QSGNFFVPKALVILSHYPFFNTFREVGPQASRRDLS 338 H+AQF +P+G +L A P+FFSFVLT++ G + Y C L E L P + + +P+W Q+ + + PK LV+LS YPF++TFR Q R LS Sbjct: 203 HIAQFAFPEGLTLSAAFREPTFFSFVLTNVSGAKLYACALQFDE----LLTPFEVMALFVKDV------MPTWAQALSSGAKQASSVYSPKCLVVLSQYPFYSTFRMFLQQIYRLSLS 310
BLAST of EWM20633.1 vs. NCBI_GenBank
Match: gi|813180563|ref|XP_012206090.1| (hypothetical protein SPRG_09946 [Saprolegnia parasitica CBS 223.65] >gi|641528940|gb|KDO23138.1| hypothetical protein SPRG_09946 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 72.0182 bits (175), Expect = 7.127e-10 Identity = 48/166 (28.92%), Postives = 77/166 (46.39%), Query Frame = 0 Query: 190 LPPSLAPDETHMACKVLDAYPTASHYAQGEGKEAVKVPDHVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEEVSTL---------PHPAKTQTALGRAFQEAGLPLPSWVQ--------SGNFFVPKALVILSHYPFFNTFREVGPQASRRDLS 338 L + P + +LD++P A A +P H++QF +P+G +L P+FF+FVLT++ G + Y C L EE+S L P KT+ + +P W Q + + + PK L+++SH+PFF+ +R Q R LS Sbjct: 176 LGENAGPSDVQFVPTILDSFPDAHADA--------PLPSHISQFAFPEGLALSQTHITPTFFTFVLTNVSGAKLYACALKFVEELSPLEVLTLFAPPPGSEKTKAPI----------IPKWAQDLSAGSASTTSVYSPKCLLLISHHPFFSGYRLFLQQIYRLSLS 323
BLAST of EWM20633.1 vs. NCBI_GenBank
Match: gi|673037556|ref|XP_008872739.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574471535|gb|ETV98542.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 72.0182 bits (175), Expect = 7.308e-10 Identity = 42/118 (35.59%), Postives = 60/118 (50.85%), Query Frame = 0 Query: 229 HVAQFVYPDGFSLRAEEAPPSFFSFVLTDMDGTRTYGCVLHLCEEVSTLPHPAKTQTALGRAFQEAGLPLPSWV--------QSGNFFVPKALVILSHYPFFNTFREVGPQASRRDLS 338 H+AQF +P+G +L A P+FFSFVLT++ G + Y C L E L P + + +P+W Q+ + + PK LV+LS YPF++TFR Q R LS Sbjct: 203 HIAQFAFPEGLTLSAAFREPTFFSFVLTNVSGAKLYACALQFDE----LLTPFEVMALFVKDV------MPTWAQALSSGAKQASSVYSPKCLVVLSQYPFYSTFRMFLQQIYRLSLS 310 The following BLAST results are available for this feature:
BLAST of EWM20633.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|