rna10066, rna10066 (mRNA) Nannochloropsis gaditana

Overview
Namerna10066
Unique Namerna10066
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1797
Alignment locationKK037261.1:54405..54802 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100757g1.6623.mrna
Orig protein idgnl|cribi|Naga_100757g1.6623
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037261.1supercontigKK037261.1:54405..54802 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100757g1gene9767Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10066rna10066-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20638.1cds10035Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10066 ID=rna10066|Name=rna10066|organism=Nannochloropsis gaditana|type=mRNA|length=1797bp
AATGGCAGAAAAGACGGACGTGCTGAACAACCTGCGCGCATCAGAGGTCT
TGGTTTGTGGCATATGCGGGAGTTAGGAAAAAAAAAAGGATGGAGCCAGG
CAAAGGAAGGAGCGAGGGTGGAAACGAGGAGAAGAAGGCCGGCGAGAAGC
AGGCCTGTTCACCGCACGCGACTTTCTCCCCTCGTACAGGAGGACAAGAT
CACCTTCGAGATGAGCCTTGACGACGACATCAACAAGGAGGAAATGCTGG
ACGTTTTCCGCTTTGATCCCGACTACGAAGCCAACGAGCGGACGTGGAAG
GAGATCAAGAAAGAAATCTTAGGAGAAAGCGGGTCGGAGGCGGACGACGA
GAGTGGCAGCGATGAGGAGGAAGAAAGCGACGAAGAGGAGGGAAGGCAGG
AGGGGGGAGCGGTCGGTATGCCCGGGGGCAATCAAGTACAGGTTGTGTAC
GACATGACAGAGCAGGACCTGGTGAACCTGAAGAGGACGATCTACCTGAC
TATTATGTCCTCGGCGGGCTTCGAGGAGGCCACGCACAAGCTGATGAAAC
TGGACTTGAAGAACGGTCAAGAAATGGAGCTCTGCCTGATGCTCGTCGAG
TGCTGTTCTCAAGAAAAGACCTACCTCAAGTACTACGGATTCATTGCCTG
CCGTATTTGTTTGCTCAATCGGGTTTATCAGGACGCGTTCGAGGAGGTTT
TCAAAGAGCAGTACTCGACCATCCACCGCCTCGAGACCAACAAATTGCGG
AATGTGGCCAAGATTTTCGCCCACTTGCTCTACAGCGACTCCTTGCCCTG
GACGGTCTTTGAGTGCATCCACCTGAACGAAGAAGATACGACGTCCTCGT
CCCGGATTTTCATCAAAATCCTTTGCCAGGAACTTTCCGAGCAATTGGGC
CTGGCTAAGCTCAAAGAACGCTTCTCAGACCCTTACATGGAGCAGGCTTT
CGCTGGTCTCTTCCCCACGCACGACCCGCGCGCCACCCGCTTTGCCATCA
ATTTCTTCGTCTCGATCGGCCTGGGAGGGCTGACGGACGGGCTTCGAACT
CACTTGAAGAACTACCAGAAACGCCTGGTCGAGGAAGCGCAGGCAGCGGC
ACTGCGACAAGCAGAAGAGAGCAGCGACAGCGACAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAGTAGTAGTGACAGCAGT
TCGACTTCATCTTCCTCCTCGTCCTCGACCTCCTCCTCCAGTAGCTCGGA
GAGTGAGAGCGATTGAGTGGAGAGAGCAGAGCGGGCGCAGCGAGGCCGAG
AAATGTCGGCGATAGGAAGAAAGGAGGCTGGGGTCCTCGATCAGTGCCGA
CAGAGACTTGAAAGGCTCTCCTGGGGAAACCGAAAGAAGCCCGGGGCAGG
GACTGCTAGTGAATTTATGAGGAGCAATGTGAAGAAGGGGGCATTAAGAA
GGGGAAGAAGGGAGGGAGAGGGGGAGTGAAAGCCAGTGACAGCGGAGAAG
GAGACTGGTGACGGCGAAAGTCGAGATGAAATGCCCCGTCGCAGGAGGGA
AGGCATCGGAAAAGAGGCCTCTTAGGCCAGCGCGTCGGACGAGAGTTGCC
ACGTAAAAATGGCGCTAAAAAAGGAAAGCGATCCACTAGCCGTGGGAGAA
GAAAAAGAAGCATTAAAAAGGCGCCGACTGGCCTCCCTTTTCCCACGATC
ACGCTTCGTACATCTCAAGAACAATTCAACTCGCTTGGCTTCGAAAAGCT
TGCTCACTACAGAAAACAGGACTTCACCCCCTACTTTCTTTTCACTC
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protein sequence of rna10066

>rna10066-protein ID=rna10066-protein|Name=rna10066|organism=Nannochloropsis gaditana|type=polypeptide|length=116bp
MHRSAFRASEQGRWIETGGQGGQEIGREEGREGYVDGVTQRTRVRKVGGE
VLFSVVSKLFEAKRVELFLRCTKRDRGKREASRRLFNASFSSPTASGSLS
FFSAIFTWQLSSDALA
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mRNA from alignment at KK037261.1:54405..54802-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10066 ID=rna10066|Name=rna10066|organism=Nannochloropsis gaditana|type=mRNA|length=398bp|location=Sequence derived from alignment at KK037261.1:54405..54802- (Nannochloropsis gaditana)
ATGCATCGTAGTGCTTTCAGGGCAAGTGAACAAGGACGTTGGATCGAGAC
AGGCGGGCAGGGAGGGCAGGAGATAGGGAGGGAGGAAGGGAGGGAGGGCT
ATGTGGACGGTGTCACCCAAAGAACTCGGGTCCGAGTGAGAGACGGGAGT
AGAGTCCTGTGGAGGGAGGGCGGAGTGAAAAGAAAGTAGGGGGTGAAGTC
CTGTTTTCTGTAGTGAGCAAGCTTTTCGAAGCCAAGCGAGTTGAATTGTT
CTTGAGATGTACGAAGCGTGATCGTGGGAAAAGGGAGGCCAGTCGGCGCC
TTTTTAATGCTTCTTTTTCTTCTCCCACGGCTAGTGGATCGCTTTCCTTT
TTTAGCGCCATTTTTACGTGGCAACTCTCGTCCGACGCGCTGGCCTAA
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Coding sequence (CDS) from alignment at KK037261.1:54405..54802-

>rna10066 ID=rna10066|Name=rna10066|organism=Nannochloropsis gaditana|type=CDS|length=702bp|location=Sequence derived from alignment at KK037261.1:54405..54802- (Nannochloropsis gaditana)
AAAGTAGGGGGTGAAGTCCTGTTTTCTGTAGTGAGCAAGCTTTTCGAAGC
CAAGCGAGTTGAATTGTTCTTGAGATGTACGAAGCGTGATCGTGGGAAAA
GGGAGGCCAGTCGGCGCCTTTTTAATGCTTCTTTTTCTTCTCCCACGGCT
AGTGGATCGCTTTCCTTTTTTAGCGCCATTTTTACGTGGCAACTCTCGTC
CGACGCGCTGGCCTAAATGCATCGTAGTGCTTTCAGGGCAAGTGAACAAG
GACGTTGGATCGAGACAGGCGGGCAGGGAGGGCAGGAGATAGGGAGGGAG
GAAGGGAGGGAGGGCTATGTGGACGGTGTCACCCAAAGAACTCGGGTCCG
AAAAGTAGGGGGTGAAGTCCTGTTTTCTGTAGTGAGCAAGCTTTTCGAAG
CCAAGCGAGTTGAATTGTTCTTGAGATGTACGAAGCGTGATCGTGGGAAA
AGGGAGGCCAGTCGGCGCCTTTTTAATGCTTCTTTTTCTTCTCCCACGGC
TAGTGGATCGCTTTCCTTTTTTAGCGCCATTTTTACGTGGCAACTCTCGT
CCGACGCGCTGGCCTAAATGCATCGTAGTGCTTTCAGGGCAAGTGAACAA
GGACGTTGGATCGAGACAGGCGGGCAGGGAGGGCAGGAGATAGGGAGGGA
GGAAGGGAGGGAGGGCTATGTGGACGGTGTCACCCAAAGAACTCGGGTCC
GA
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Synonyms
Publications