EWM20651.1, cds10022 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20651.1 vs. NCBI_GenBank
Match: gi|585100453|gb|EWM20651.1| (Protein of unknown function DUF1640 [Nannochloropsis gaditana]) HSP 1 Score: 444.891 bits (1143), Expect = 6.010e-158 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0 Query: 1 MSLMLHPWRRWRRLGDRCLYRGLSSSFSSSSSSSSSSSSPSSPSSPSSSSSPPPLFSTPFNASPTLSGTPSAPSSQIHASLLGPGKAVVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEKVLTDRHLTRRELMEQRVSVLQVAW 222 MSLMLHPWRRWRRLGDRCLYRGLSSSFSSSSSSSSSSSSPSSPSSPSSSSSPPPLFSTPFNASPTLSGTPSAPSSQIHASLLGPGKAVVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEKVLTDRHLTRRELMEQRVSVLQVAW Sbjct: 1 MSLMLHPWRRWRRLGDRCLYRGLSSSFSSSSSSSSSSSSPSSPSSPSSSSSPPPLFSTPFNASPTLSGTPSAPSSQIHASLLGPGKAVVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEKVLTDRHLTRRELMEQRVSVLQVAW 222
BLAST of EWM20651.1 vs. NCBI_GenBank
Match: gi|553187452|ref|XP_005854614.1| (hypothetical protein NGA_0165400, partial [Nannochloropsis gaditana CCMP526] >gi|422294447|gb|EKU21747.1| hypothetical protein NGA_0165400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 354.369 bits (908), Expect = 7.023e-123 Identity = 174/175 (99.43%), Postives = 174/175 (99.43%), Query Frame = 0 Query: 48 SSSSPPPLFSTPFNASPTLSGTPSAPSSQIHASLLGPGKAVVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEKVLTDRHLTRRELMEQRVSVLQVAW 222 SS SPPPLFSTPFNASPTLSGTPSAPSSQIHASLLGPGKAVVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEKVLTDRHLTRRELMEQRVSVLQVAW Sbjct: 1 SSPSPPPLFSTPFNASPTLSGTPSAPSSQIHASLLGPGKAVVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEKVLTDRHLTRRELMEQRVSVLQVAW 175
BLAST of EWM20651.1 vs. NCBI_GenBank
Match: gi|953499884|emb|CEG38525.1| (Uncharacterized membrane protein [Plasmopara halstedii]) HSP 1 Score: 92.0485 bits (227), Expect = 1.956e-19 Identity = 49/133 (36.84%), Postives = 83/133 (62.41%), Query Frame = 0 Query: 89 VSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLE-KVLTDRHLTRRELMEQRVSVLQV 220 + FDT + SLQE GFS Q++ +L V+ M + + ++AT+ + ++LK++LSER+F ST++FD+AQRH++E++ERD +L+ D+ + KI E++ LE K L + L E R+S+ +V Sbjct: 52 LHFDTHHVVQSLQEKGFSIQQSEAILDVMKDAMADSLVAQARILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKV 184
BLAST of EWM20651.1 vs. NCBI_GenBank
Match: gi|673044185|ref|XP_008876053.1| (hypothetical protein, variant [Aphanomyces invadans] >gi|574468333|gb|ETV95352.1| hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 92.0485 bits (227), Expect = 2.108e-19 Identity = 53/164 (32.32%), Postives = 92/164 (56.10%), Query Frame = 0 Query: 58 TPFNASPTLSGTPSAPSSQIHASLLGPGKAVVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEKVLTDRHLTRRELMEQRVSVLQVA 221 T N TLSG+ GP +A + FD+ + LQ GFS Q++ VL L + M+E M+AT+ + + LKS+L++R+F ST++FD+AQRH ++++ERD +L+ D+ + K+ E+ ++EK R L ++++ ++ V L +A Sbjct: 32 TSVNTMTTLSGSDGQ----------GP-RATLPFDSNRFVTQLQHQGFSAEQSEAVLDALKSTMKEALDVQDGMLATKSEHVQLKSELTDRVFNSTLKFDIAQRHMRDLLERDFNNLKQDIRMIEKNDFDKVRNEIVDMEK----RFLLQKQITDRMVHKLHLA 180
BLAST of EWM20651.1 vs. NCBI_GenBank
Match: gi|673044183|ref|XP_008876052.1| (hypothetical protein H310_11241 [Aphanomyces invadans] >gi|574468332|gb|ETV95351.1| hypothetical protein H310_11241 [Aphanomyces invadans]) HSP 1 Score: 92.4337 bits (228), Expect = 2.471e-19 Identity = 53/164 (32.32%), Postives = 92/164 (56.10%), Query Frame = 0 Query: 58 TPFNASPTLSGTPSAPSSQIHASLLGPGKAVVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEKVLTDRHLTRRELMEQRVSVLQVA 221 T N TLSG+ GP +A + FD+ + LQ GFS Q++ VL L + M+E M+AT+ + + LKS+L++R+F ST++FD+AQRH ++++ERD +L+ D+ + K+ E+ ++EK R L ++++ ++ V L +A Sbjct: 32 TSVNTMTTLSGSDGQ----------GP-RATLPFDSNRFVTQLQHQGFSAEQSEAVLDALKSTMKEALDVQDGMLATKSEHVQLKSELTDRVFNSTLKFDIAQRHMRDLLERDFNNLKQDIRMIEKNDFDKVRNEIVDMEK----RFLLQKQITDRMVHKLHLA 180
BLAST of EWM20651.1 vs. NCBI_GenBank
Match: gi|675165507|ref|XP_008891638.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|566027275|gb|ETI50186.1| hypothetical protein, variant [Phytophthora parasitica P1569] >gi|567964584|gb|ETK90069.1| hypothetical protein, variant [Phytophthora parasitica] >gi|567993285|gb|ETL43466.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568022585|gb|ETL96649.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568052937|gb|ETM49794.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568107750|gb|ETN22374.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|570330961|gb|ETO78909.1| hypothetical protein, variant [Phytophthora parasitica P1976] >gi|570954693|gb|ETP19950.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1] >gi|570989744|gb|ETP47893.1| hypothetical protein, variant [Phytophthora parasitica P10297] >gi|970632048|gb|KUF78457.1| hypothetical protein AM587_10007003 [Phytophthora nicotianae]) HSP 1 Score: 91.2781 bits (225), Expect = 7.339e-19 Identity = 48/131 (36.64%), Postives = 83/131 (63.36%), Query Frame = 0 Query: 91 FDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLE-KVLTDRHLTRRELMEQRVSVLQV 220 FDT + SLQ+ GFS Q++ +L+V+ M + + ++AT+ + ++LK++LSER+F ST++FD+AQRH++E++ERD +L+ D+ + KI E++ LE K L + L E R+S+ +V Sbjct: 79 FDTHNVVKSLQDKGFSPDQSEAILQVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEKKFLLQKQAEDETLNELRLSMEKV 209
BLAST of EWM20651.1 vs. NCBI_GenBank
Match: gi|695389191|ref|XP_009519371.1| (hypothetical protein PHYSODRAFT_478596 [Phytophthora sojae] >gi|348684268|gb|EGZ24083.1| hypothetical protein PHYSODRAFT_478596 [Phytophthora sojae]) HSP 1 Score: 88.9669 bits (219), Expect = 1.553e-18 Identity = 42/108 (38.89%), Postives = 72/108 (66.67%), Query Frame = 0 Query: 91 FDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEK 198 FDT + SLQE GF+ Q++ +L+V+ M + ++AT+ + ++LK++LSER+F ST++FD+AQRH++E++ERD +L+ D+ + KI E++ LEK Sbjct: 27 FDTHNVVKSLQERGFTVDQSEAILQVMKEAMAASLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEK 134
BLAST of EWM20651.1 vs. NCBI_GenBank
Match: gi|1173952063|gb|OQR99814.1| (hypothetical protein ACHHYP_04332 [Achlya hypogyna]) HSP 1 Score: 88.9669 bits (219), Expect = 3.003e-18 Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = 0 Query: 88 VVSFDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEK 198 V FD+ K LQ GFS QA+ +L L + MEE +AT+ D L LKS+LSER+F +T++FD+AQRH KE+++RD +L+ ++ A+ K+ E+ +EK Sbjct: 32 VYPFDSHKFVTQLQYQGFSLEQAEAILEALKSTMEEGLETQETGLATKADHLTLKSELSERVFNTTLKFDIAQRHMKEILDRDFDNLKQEIRIIEKADFDKVLAEIMQVEK 142
BLAST of EWM20651.1 vs. NCBI_GenBank
Match: gi|301105481|ref|XP_002901824.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262099162|gb|EEY57214.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 89.3521 bits (220), Expect = 3.679e-18 Identity = 42/108 (38.89%), Postives = 72/108 (66.67%), Query Frame = 0 Query: 91 FDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEK 198 FDT + SLQ+ GFS Q++ +L V+ M + + ++AT+ + ++LK++LSER+F ST++FD+AQRH++E++ERD +L+ D+ + KI E++ LEK Sbjct: 82 FDTHNVVKSLQDRGFSTDQSEAILHVMKDAMADSLEAQSRILATKSEHVELKAELSERVFNSTLKFDIAQRHSRELLERDFNTLKQDIRMLEKIDFDKIRMEIAELEK 189
BLAST of EWM20651.1 vs. NCBI_GenBank
Match: gi|698802574|ref|XP_009834316.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574110693|gb|ETV76191.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 87.4261 bits (215), Expect = 1.344e-17 Identity = 44/131 (33.59%), Postives = 82/131 (62.60%), Query Frame = 0 Query: 91 FDTMKMCDSLQEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLFGSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEKVLTDRHLTRRELMEQRVSVLQVA 221 FD+ + LQ GFS Q++ VL L + M+E + A++AT+ + + LKS+L++R+F ST++FD+AQRH ++++ERD +L+ D+ + K+ E+ ++EK R L ++++ ++ V L +A Sbjct: 50 FDSNRFVTQLQYQGFSVEQSEAVLDALRSTMKEALVSQDALLATKSEHVQLKSELTDRVFNSTLKFDIAQRHMRDLLERDFNNLKQDIRMIEKNDFDKVRNEIVDMEK----RFLMQKQITDRMVHKLHLA 176 The following BLAST results are available for this feature:
BLAST of EWM20651.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|