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Properties
| Property Name | Value |
|---|
| Product | Protein of unknown function DUF1640 |
| Orig transcript id | gnl|cribi|Naga_101145g1.1278.mrna |
| Orig protein id | gnl|cribi|Naga_101145g1.1278 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037261.1 | supercontig | KK037261.1:1704..3774 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10053 ID=rna10053|Name=rna10053|organism=Nannochloropsis gaditana|type=mRNA|length=642bp
ATGCACACATCTGACGCTTCGCGCTGTGTGGTTTCTCCTCCTCTGGCGGA
TCCCGATCAACGCATTGTCAATACACGCCTGCTAGTCGAGCAAGAGCTTG
CAATAGCGAGACTGGCTCGGCACCACATCAGTCCCCCGGACTCATGGACC
GACCCGCACGCTGTAGCTCTCACCCTGGCCGCTGTCCAGGTGTTGACAGA
GGAAGCTAAGGAAAAAGGAATAAAACTTAAGAAGCAACTGCCAGTTATGT
CTATTGAAACACAAGAGACTTCTAAGGAAAACGATTTTGGGCCAGCACGT
CATACAAGCACTTGGACGAGATTGCCTGAGACACTGGCAACGGGCCTACC
TTCTCGCGTATTGCGGCGCGGGGCTGCGGAGCTGAATCTTCGTCTACAAG
CATATGAGAAGGAGCTTGAGAAAGTAGAGGCGCACTTGAAGAAAACTGCG
CGTGAGGCAGAGGTACTGGAAAAGCTAGCCCCGCTGCTGACGGTGGAGAG
GGATCCTGGGTGGCTGCTTGAGAAAGCGAGACAGAAAGTTGAAAGCCTCC
TGCAGCAGCACGGAAGGATCATGACGCAGGAAGAGGCGGAGGAGGCAAAC
CTGATTGCGGCGCGGGCAAGACGTACCGGAGTCTCTTTGTAA back to topprotein sequence of rna10053 >rna10053-protein ID=rna10053-protein|Name=rna10053|organism=Nannochloropsis gaditana|type=polypeptide|length=222bp
MSLMLHPWRRWRRLGDRCLYRGLSSSFSSSSSSSSSSSSPSSPSSPSSSS
SPPPLFSTPFNASPTLSGTPSAPSSQIHASLLGPGKAVVSFDTMKMCDSL
QEAGFSKAQAQTVLRVLVAGMEECTLRSTAMIATRRDLLDLKSDLSERLF
GSTMRFDVAQRHNKEVIERDLQSLRSDVNASIHAEIQKIEREMSNLEKVL
TDRHLTRRELMEQRVSVLQVAW back to topmRNA from alignment at KK037261.1:1704..3774+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10053 ID=rna10053|Name=rna10053|organism=Nannochloropsis gaditana|type=mRNA|length=2071bp|location=Sequence derived from alignment at KK037261.1:1704..3774+ (Nannochloropsis gaditana)
ATAATGGGAATGTCGAGCTCCACAGCACTGACACTCGCTAAGGATCTACA
GCGATCGACGTGTACTACGTGAAGCAATTTGGTGTCCAAACACCCGACGC
ACAAGTCTTTGGAAAGCGTGTCGAAGGACATCAGGCTGTGCGTTTGAGTC
CTTGGAAGCAGGTGGTAGTAAGCAGGCGCGCTGGCGCGCTTCAATCCGCC
TTGATGGTCCGCTATGTTATACacacgctttcctcccccttcagtCCAAT
AAATGATCCTTAAATATTTGTCTGTAAAttggggacggggggggtcATCG
GCTCAGGGAGACTGCAAAGTGGGAATGACATGAAGTCAGAAACACCAGAG
TTTCCTGAAGTCTAAGGCGTGAAGGCCGCGCATGTAGGTAATTGTGTCGC
CCCGGCCATGTGTTCTTGCTTGTGTCTTTTCAATACGCTTCGCACTTCCG
GTCTTATATCCCGCATCCACAGCTCGGAATGTCCTTGATGCTCCATCCCT
GGCGTCGATGGAGGCGACTTGGGGACCGCTGCCTCTACCGCGGtttgtct
tcttccttctcctcctcctcctcctcctcctcctcctcctcttccccttc
ctccccctcctccccttcctcctcctcctcccccccacctttGTTCTCTA
CTCCGTTCAACGCCTCCCCTACCCTGTCCGGCACTCCATCCGCTCCTTCA
TCACAAATTCATGCTTCTTTGTTGGGaccggggaaggcggtggtaTCCTT
TGACACCATGAAAGTGAGTCATAAGACGAGGCACCTCACGGCCCAAGCTG
GCGGAAAAAGGGCCCTCAGACGACAGACAGTGGTGTACGATGCAGGGACG
TGATGCCTACTCTTTACAACGAAGTGATCATTGGCACCCCTCTCTTGGCC
TGACTGGCCTTTTCACttatttttcctccctccctccttccctccctccc
tccttccctccctccctccctgcgtctCTCCCCCGACCCAGATGTGCGAC
TCCTTGCAGGAAGCAGGCTTCTCCAAAGCGCAGGCTCAGACCGTCTTGAG
AGTGCTGGtcgcggggatggaggagtgCACGTTGAGAAGCACGGCGATGG
TGAGCAagaggggacgggggaaggggagacgaggggcttcctccgggtag
cttttcgAGGGGCGTCGAAACGGTCCTCGGGcctggggaggaagaggagg
acgaaaggaggaaggacggtgCCTTGCGAGACTGTTGGCACTGCTTAGAG
CGCCTCTCTGTGAGGCGGCTTTGCCTCAGGAAATTTCCTCGTTCGTCCCG
AGACCGACCCTCTGGCCCCCACCTTCCAATGCCATCAACAAATTGCACAT
TGCACCCACCTTaattcctccctttcctcccccgggaAGATCGCGACGCG
GCGGGACCTGTTGGACCTGAAATCAGACTTGAGCGAACGTCTCTTCGGCA
GCACCATGCGTTTCGACGTGGCGCAACGCCACAACAAGGAAGTGATCGAG
AGGGACCTACAGTCCTtgcggtgaggagggagggagggagggagggaggg
aggaatcgaTGGCGCAGAAGGTGCAGGGTCGGAGAAATCGACAAGAATCG
GTGGAGgggccccaaaaaaaagggggTGGCGCGATGATCGTGTCGGAAAG
GGCAGAAAGGTGTGCCGGAGGCAGTAAGGATCCGTCCTCCTCAGTCGGCT
CACCCTCGCTTCAATtgaaggggggaaacgggCACATGGTGTGCGTGCTC
CACCCTTGACACCTTCGGCACCCCGACAGCCGTCTTTCcttccagcctcc
cccctcggcgatgtttctcgtgccacttcccgcctccttctcccccgccc
cggtTCGACCCTAGCTCATTTGCCGTGCTTATCCCTCTCCGAATCAGATC
GGACGTCAACGCCTCCATTCACGCGGAGATCCAAAAAATCGAGCGGGAAA
TGTCGAATTTGGAAAAAGTGCTGACCGACAGGCACTTGACCCGGCGGGAG
CTCATGGAGCAGCGCGTTTCCGTCTTACAGGTAGCCTGGTAACGGTCGAA
GAGacgcagggaagggggggc back to topCoding sequence (CDS) from alignment at KK037261.1:1704..3774+ >rna10053 ID=rna10053|Name=rna10053|organism=Nannochloropsis gaditana|type=CDS|length=2676bp|location=Sequence derived from alignment at KK037261.1:1704..3774+ (Nannochloropsis gaditana)
ATGTCCTTGATGCTCCATCCCTGGCGTCGATGGAGGCGACTTGGGGACCG
CTGCCTCTACCGCGGtttgtcttcttccttctcctcctcctcctcctcct
cctcctcctcctcttccccttcctccccctcctccccttcctcctcctcc
tcccccccacctttGTTCTCTACTCCGTTCAACGCCTCCCCTACCCTGTC
CGGCACTCCATCCGCTCCTTCATCACAAATTCATGCTTCTTTGTTGGGac
cggggaaggcggtggtaTCCTTTGACACCATGAAAATGTGCGACTCCTTG
CAGGAAGCAGGCTTCTCCAAAGCGCAGGCTCAGACCGTCTTGAGAGTGCT
GGtcgcggggatggaggagtgCACGTTGAGAAGCACGGCGATGATCGCGA
CGCGGCGGGACCTGTTGGACCTGAAATCAGACTTGAGCGAACGTCTCTTC
GGCAGCACCATGCGTTTCGACGTGGCGCAACGCCACAACAAGGAAGTGAT
CGAGAGGGACCTACAGTCCTtgcgATCGGACGTCAACGCCTCCATTCACG
CGGAGATCCAAAAAATCGAGCGGGAAATGTCGAATTTGGAAAAAGTGCTG
ACCGACAGGCACTTGACCCGGCGGGAGCTCATGGAGCAGCGCGTTTCCGT
CTTACAGGTAGCCTGGTAAATGTCCTTGATGCTCCATCCCTGGCGTCGAT
GGAGGCGACTTGGGGACCGCTGCCTCTACCGCGGtttgtcttcttccttc
tcctcctcctcctcctcctcctcctcctcctcttccccttcctccccctc
ctccccttcctcctcctcctcccccccacctttGTTCTCTACTCCGTTCA
ACGCCTCCCCTACCCTGTCCGGCACTCCATCCGCTCCTTCATCACAAATT
CATGCTTCTTTGTTGGGaccggggaaggcggtggtaTCCTTTGACACCAT
GAAAATGTGCGACTCCTTGCAGGAAGCAGGCTTCTCCAAAGCGCAGGCTC
AGACCGTCTTGAGAGTGCTGGtcgcggggatggaggagtgCACGTTGAGA
AGCACGGCGATGATCGCGACGCGGCGGGACCTGTTGGACCTGAAATCAGA
CTTGAGCGAACGTCTCTTCGGCAGCACCATGCGTTTCGACGTGGCGCAAC
GCCACAACAAGGAAGTGATCGAGAGGGACCTACAGTCCTtgcgATCGGAC
GTCAACGCCTCCATTCACGCGGAGATCCAAAAAATCGAGCGGGAAATGTC
GAATTTGGAAAAAGTGCTGACCGACAGGCACTTGACCCGGCGGGAGCTCA
TGGAGCAGCGCGTTTCCGTCTTACAGGTAGCCTGGTAAATGTCCTTGATG
CTCCATCCCTGGCGTCGATGGAGGCGACTTGGGGACCGCTGCCTCTACCG
CGGtttgtcttcttccttctcctcctcctcctcctcctcctcctcctcct
cttccccttcctccccctcctccccttcctcctcctcctcccccccacct
ttGTTCTCTACTCCGTTCAACGCCTCCCCTACCCTGTCCGGCACTCCATC
CGCTCCTTCATCACAAATTCATGCTTCTTTGTTGGGaccggggaaggcgg
tggtaTCCTTTGACACCATGAAAATGTGCGACTCCTTGCAGGAAGCAGGC
TTCTCCAAAGCGCAGGCTCAGACCGTCTTGAGAGTGCTGGtcgcggggat
ggaggagtgCACGTTGAGAAGCACGGCGATGATCGCGACGCGGCGGGACC
TGTTGGACCTGAAATCAGACTTGAGCGAACGTCTCTTCGGCAGCACCATG
CGTTTCGACGTGGCGCAACGCCACAACAAGGAAGTGATCGAGAGGGACCT
ACAGTCCTtgcgATCGGACGTCAACGCCTCCATTCACGCGGAGATCCAAA
AAATCGAGCGGGAAATGTCGAATTTGGAAAAAGTGCTGACCGACAGGCAC
TTGACCCGGCGGGAGCTCATGGAGCAGCGCGTTTCCGTCTTACAGGTAGC
CTGGTAAATGTCCTTGATGCTCCATCCCTGGCGTCGATGGAGGCGACTTG
GGGACCGCTGCCTCTACCGCGGtttgtcttcttccttctcctcctcctcc
tcctcctcctcctcctcctcttccccttcctccccctcctccccttcctc
ctcctcctcccccccacctttGTTCTCTACTCCGTTCAACGCCTCCCCTA
CCCTGTCCGGCACTCCATCCGCTCCTTCATCACAAATTCATGCTTCTTTG
TTGGGaccggggaaggcggtggtaTCCTTTGACACCATGAAAATGTGCGA
CTCCTTGCAGGAAGCAGGCTTCTCCAAAGCGCAGGCTCAGACCGTCTTGA
GAGTGCTGGtcgcggggatggaggagtgCACGTTGAGAAGCACGGCGATG
ATCGCGACGCGGCGGGACCTGTTGGACCTGAAATCAGACTTGAGCGAACG
TCTCTTCGGCAGCACCATGCGTTTCGACGTGGCGCAACGCCACAACAAGG
AAGTGATCGAGAGGGACCTACAGTCCTtgcgATCGGACGTCAACGCCTCC
ATTCACGCGGAGATCCAAAAAATCGAGCGGGAAATGTCGAATTTGGAAAA
AGTGCTGACCGACAGGCACTTGACCCGGCGGGAGCTCATGGAGCAGCGCG
TTTCCGTCTTACAGGTAGCCTGGTAA back to top
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