EWM20696.1, cds9979 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20696.1 vs. NCBI_GenBank
Match: gi|585100519|gb|EWM20696.1| (hypothetical protein Naga_100674g3 [Nannochloropsis gaditana]) HSP 1 Score: 355.525 bits (911), Expect = 4.011e-124 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0 Query: 1 MNPHTTYIICPFPPPPLLRSDPQVYTAVVELSARLVAEPKVLTAVNELLLASSHKVLEDPQVVDHSKTFVAEVVADDALQRTGQREGGREGSQGLVAECLRPQSRRRLTCPWPPPPFLFPSFPSSSLLRGHGHMELVSIFLPAKTGPGALVRSPMRGRGIHAEWWAGRWVGGECV 175 MNPHTTYIICPFPPPPLLRSDPQVYTAVVELSARLVAEPKVLTAVNELLLASSHKVLEDPQVVDHSKTFVAEVVADDALQRTGQREGGREGSQGLVAECLRPQSRRRLTCPWPPPPFLFPSFPSSSLLRGHGHMELVSIFLPAKTGPGALVRSPMRGRGIHAEWWAGRWVGGECV Sbjct: 1 MNPHTTYIICPFPPPPLLRSDPQVYTAVVELSARLVAEPKVLTAVNELLLASSHKVLEDPQVVDHSKTFVAEVVADDALQRTGQREGGREGSQGLVAECLRPQSRRRLTCPWPPPPFLFPSFPSSSLLRGHGHMELVSIFLPAKTGPGALVRSPMRGRGIHAEWWAGRWVGGECV 175
BLAST of EWM20696.1 vs. NCBI_GenBank
Match: gi|223994337|ref|XP_002286852.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220978167|gb|EED96493.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 63.5438 bits (153), Expect = 1.010e-8 Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0 Query: 18 LRSDPQVYTAVVELSARLVAEPKVLTAVNELLLASSHKVLEDPQVVDHSKTFVAEVVADDALQRTG 83 L +D +VY + +L ++ E VL A +LL S+H+ L DP V+DHS F EVV DD +QRTG Sbjct: 140 LVNDEEVYAELTKLVVQIGEEKDVLQATQKLLTESAHRTLNDPDVLDHSMEFATEVVGDDVVQRTG 205
BLAST of EWM20696.1 vs. NCBI_GenBank
Match: gi|397624251|gb|EJK67321.1| (hypothetical protein THAOC_11664 [Thalassiosira oceanica]) HSP 1 Score: 58.151 bits (139), Expect = 8.413e-7 Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 0 Query: 18 LRSDPQVYTAVVELSARLVAEPKVLTAVNELLLASSHKVLEDPQVVDHSKTFVAEVVADDALQRTG 83 L +D +VY + L ++ EP+VL A LL S+H L D V++HS F VV DDA+QRTG Sbjct: 235 LINDDEVYRELTRLVVKIGEEPEVLDATQNLLSKSAHNTLNDRDVLEHSMEFATVVVGDDAVQRTG 300 The following BLAST results are available for this feature:
BLAST of EWM20696.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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