EWM20705.1, cds9968 (CDS) Nannochloropsis gaditana

Overview
NameEWM20705.1
Unique Namecds9968
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:95725..97515 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20705.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100826g2.7070.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:95725..97515 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM20705.1 vs. NCBI_GenBank
Match: gi|585100537|gb|EWM20705.1| (hypothetical protein Naga_100826g2 [Nannochloropsis gaditana])

HSP 1 Score: 1239.94 bits (3207), Expect = 0.000e+0
Identity = 596/596 (100.00%), Postives = 596/596 (100.00%), Query Frame = 0
Query:    1 MHRRAEAHCEEDEGLVLRICSFHGFECMMSRCQSNSASITGGMRSSFAARRRDALGYRVPGTTLRLPYSWTLAMFVGVVCMLAVVIFAGRSLTVVGGIDNEREDAGLYPVLSWTGHGKDKKALKASDEQVLRQELQELEARMDELERARRSMPRPPLTTTHHVLEAMEGQHAVEKARTDSKPVPGDADDHEQKSAQHKINPAVLGTDKAAAHGALAASTQTLGPGHSPEAKEGEHLPPRQDLEKADSHATNNPPATESAAAYDSDTSPVPLVDPTVLGRDPPALDHADMPGLCAHKSDGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAATKEGTEPIFLGRPFRPPGSDIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKPDWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCPNIKASEGEVAQRAVDARR 596
            MHRRAEAHCEEDEGLVLRICSFHGFECMMSRCQSNSASITGGMRSSFAARRRDALGYRVPGTTLRLPYSWTLAMFVGVVCMLAVVIFAGRSLTVVGGIDNEREDAGLYPVLSWTGHGKDKKALKASDEQVLRQELQELEARMDELERARRSMPRPPLTTTHHVLEAMEGQHAVEKARTDSKPVPGDADDHEQKSAQHKINPAVLGTDKAAAHGALAASTQTLGPGHSPEAKEGEHLPPRQDLEKADSHATNNPPATESAAAYDSDTSPVPLVDPTVLGRDPPALDHADMPGLCAHKSDGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAATKEGTEPIFLGRPFRPPGSDIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKPDWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCPNIKASEGEVAQRAVDARR
Sbjct:    1 MHRRAEAHCEEDEGLVLRICSFHGFECMMSRCQSNSASITGGMRSSFAARRRDALGYRVPGTTLRLPYSWTLAMFVGVVCMLAVVIFAGRSLTVVGGIDNEREDAGLYPVLSWTGHGKDKKALKASDEQVLRQELQELEARMDELERARRSMPRPPLTTTHHVLEAMEGQHAVEKARTDSKPVPGDADDHEQKSAQHKINPAVLGTDKAAAHGALAASTQTLGPGHSPEAKEGEHLPPRQDLEKADSHATNNPPATESAAAYDSDTSPVPLVDPTVLGRDPPALDHADMPGLCAHKSDGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAATKEGTEPIFLGRPFRPPGSDIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKPDWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCPNIKASEGEVAQRAVDARR 596          
BLAST of EWM20705.1 vs. NCBI_GenBank
Match: gi|553180570|ref|XP_005853425.1| (glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [Nannochloropsis gaditana CCMP526] >gi|422295635|gb|EKU22934.1| glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1153.27 bits (2982), Expect = 0.000e+0
Identity = 563/596 (94.46%), Postives = 566/596 (94.97%), Query Frame = 0
Query:    1 MHRRAEAHCEEDEGLVLRICSFHGFECMMSRCQSNSASITGGMRSSFAARRRDALGYRVPGTTLRLPYSWTLAMFVGVVCMLAVVIFAGRSLTVVGGIDNEREDAGLYPVLSWTGHGKDKKALKASDEQVLRQELQELEARMDELERARRSMPRPPLTTTHHVLEAMEGQHAVEKARTDSKPVPGDADDHEQKSAQHKINPAVLGTDKAAAHGALAASTQTLGPGHSPEAKEGEHLPPRQDLEKADSHATNNPPATESAAAYDSDTSPVPLVDPTVLGRDPPALDHADMPGLCAHKSDGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAATKEGTEPIFLGRPFRPPGSDIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKPDWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCPNIKASEGEVAQRAVDARR 596
            MHR+AEAHCEEDE                           GGMRSSFAARRRDALGYRVPGTTLRLPYSWTLAMFVGVVCMLAVVIFAGRSLTVVGGIDNER+DAGLYPVLSWTGHGKDKKALKASDEQVLRQELQELEARMDELERARRSMPRPPLTTTHHVLEAMEGQHAVEKARTDSKPVPGDADDHEQKSAQHKINPAVLGTDKAAAHGA AASTQTLGPGHSPEAKEGEHLPPRQDLEKA+SHATNN PATESAAAYDSDTSPVPLVDPTVLGRDPPALDHADMPGLCAHKSDGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAATKEGTEPIFLGRPFRPPG DIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKPDWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCPNIKASEGEVAQRAVDARR
Sbjct:    1 MHRKAEAHCEEDE---------------------------GGMRSSFAARRRDALGYRVPGTTLRLPYSWTLAMFVGVVCMLAVVIFAGRSLTVVGGIDNERDDAGLYPVLSWTGHGKDKKALKASDEQVLRQELQELEARMDELERARRSMPRPPLTTTHHVLEAMEGQHAVEKARTDSKPVPGDADDHEQKSAQHKINPAVLGTDKAAAHGASAASTQTLGPGHSPEAKEGEHLPPRQDLEKAESHATNNLPATESAAAYDSDTSPVPLVDPTVLGRDPPALDHADMPGLCAHKSDGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAATKEGTEPIFLGRPFRPPGCDIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKPDWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCPNIKASEGEVAQRAVDARR 569          
BLAST of EWM20705.1 vs. NCBI_GenBank
Match: gi|298713990|emb|CBJ27222.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 266.544 bits (680), Expect = 6.040e-80
Identity = 137/296 (46.28%), Postives = 190/296 (64.19%), Query Frame = 0
Query:  291 GLCAHKSDGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAAT----KEGTEPIFLGRPFRPPG-SDIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVP---PKPDWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCP 578
            G+C   +D  + ++ ++DVW  A K  PRI C  YT    H   ++ ++ TWA RCDG+VAFS+Q D  +PS  +KH+GPE + NMWQK RA W Y+ +H++ D+D+F+ GGDDIF++VENLR+YLLS +I  A       G+ P++LGR FRP G +D  FNSGGA ++LN  ++ +L   L         C P+Q   WEDVNVA CL + GV V + T+D  GRERF PF PG HL YRVP   P+ DWY  Y+ +  LK G +CCS  +++FHYV  + M+R + +V+  CP
Sbjct:   96 GVC-DLNDSHKQLIAQVDVWGGAAKTAPRIFCGVYTYHANHDTKIKAIKETWASRCDGFVAFSDQVDLAVPSFKIKHEGPEEWDNMWQKSRAIWKYIDRHYINDFDWFVLGGDDIFLIVENLRKYLLSDDIKKAAGGFKDGGSVPMYLGRRFRPKGNNDRIFNSGGAAYLLNQKSVRLLASHL-----DDPSCHPHQQCSWEDVNVAACLRQHGV-VAHDTRDGLGRERFHPFTPGQHLMYRVPKTNPEKDWYVDYSID--LKIGRECCSRYSLSFHYVDENLMRRLYHLVYS-CP 381          
BLAST of EWM20705.1 vs. NCBI_GenBank
Match: gi|298706199|emb|CBJ29240.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 248.825 bits (634), Expect = 9.661e-74
Identity = 129/307 (42.02%), Postives = 184/307 (59.93%), Query Frame = 0
Query:  298 DGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAAT----KEGTEPIFLGRPFRPPGSDIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKPD-----------WYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCPNIKASEGEVAQ 589
            D  + +L +IDVW  AE+G PRI C  YT    HA  V+ ++ TWA  CDG+VAFS+ TD  + +  +KH+GPE Y+NMWQK RA W Y++ H+  D+D+F+ GGDD+F++VENLR+YLLS EI  A       G  P++LGR FR  G D  +N+GG  +VLN  ++ +L   L         C+P+    WED+ VA+CL + GV  ++ T+DA GRERF PF P  H  YR+P K +           WY +   +  LK G +CCS ++++FHYV     +R H +++  CP  +A    VA+
Sbjct:   52 DDHKKLLAQIDVWEGAEEGAPRIFCGIYTHENNHATKVKAVKETWASHCDGFVAFSDVTDLELHTFKIKHEGPEEYSNMWQKARAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKYLLSDEIKGAAGGLENGGPNPMYLGRRFRFIGEDRIYNNGGPSYVLNQASVGLLASHL-----DDDACQPHAAKHWEDILVAWCLKKNGVEAFD-TRDALGRERFHPFTPAAHFGYRMPQKLEDRLVSGCVVGAWYIIQGID--LKFGRECCSQDSLSFHYVGEQVSRRLHDLIYA-CPKYQADAPVVAR 349          
BLAST of EWM20705.1 vs. NCBI_GenBank
Match: gi|298706200|emb|CBJ29241.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 238.039 bits (606), Expect = 1.251e-68
Identity = 123/298 (41.28%), Postives = 178/298 (59.73%), Query Frame = 0
Query:  297 SDGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAAT----KEGTEPIFLGRPFRPPGSD-IAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKPD-----------WYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCP 578
            +D  + +L ++DVW  A    PR+ C  YT    HA  V  ++ TWA+ CDG+VAFS+  D  I S  +KH+GPE Y+NMWQK RA W Y++ H+  D+D+F+ GGDD+F+++ENLR+YLLS EI+ A       GT P+FLGR  +  G     +N+GGA +V+N  ++ +LG  L         C+P+    WEDV V+ CL   GV  ++ T+D  GRERF PF P  H+ YR+P  P+           WY +   E  L+ GL+CCS ++I+FHY+    M+R + +V+  CP
Sbjct:  126 NDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHQNNHATKVMAIKETWARHCDGFVAFSDVADDAILSFKIKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIMENLRKYLLSDEIIRAAGGLQNGGTNPMFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHL-----DDSQCQPHTKQSWEDVLVSRCLKVNGVMAFD-TRDDLGRERFHPFSPAVHIGYRMPETPEDRLVSGFLVGGWYGIQAIE--LQFGLECCSQDSISFHYIDEQLMRRLYHLVYS-CP 414          
BLAST of EWM20705.1 vs. NCBI_GenBank
Match: gi|223994705|ref|XP_002287036.1| (UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase, partial [Thalassiosira pseudonana CCMP1335] >gi|220978351|gb|EED96677.1| UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 230.335 bits (586), Expect = 7.027e-68
Identity = 111/255 (43.53%), Postives = 160/255 (62.75%), Query Frame = 0
Query:  319 RILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAATKEGTEPIFLGRPFRPPGSDIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKP----DWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRY 569
            +I+C  YT++ AHA  ++ +R TWA  CDG++AFS ++DP +P++ L+H GPE Y NMWQK+R+ W ++  H+L+DYD+F  GGDD+FV+  NL+ YL S      T   T+  F+GR F   G++  FNSGGAG+ L+   L    ++   + +  + C        EDV +A CL   G+H +  T+DA GRERF PF PG HL +  PP P    DWY  Y KEWG+ TG DCC+ ++++FHY+K   M R+
Sbjct:    1 KIMCLVYTMADAHANRIRAMRDTWAGGCDGFLAFSTESDPRLPAISLEHDGPEEYNNMWQKIRSIWKFVGTHYLEDYDWFFIGGDDLFVLPHNLKTYLASLTQKDGTDPKTKEYFVGRRFNSGGTNGYFNSGGAGYSLSQATL----RKFFANIEDAQHCSAKSHTSMEDVMIARCLSYLGIH-FTDTRDARGRERFHPFAPGSHLHWS-PPGPGKPRDWYEDYNKEWGILTGTDCCAPDSVSFHYIKKASMVRH 249          
BLAST of EWM20705.1 vs. NCBI_GenBank
Match: gi|298706197|emb|CBJ29238.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 236.113 bits (601), Expect = 3.336e-67
Identity = 126/298 (42.28%), Postives = 177/298 (59.40%), Query Frame = 0
Query:  293 CAHKSDGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEIL----AATKEGTEPIFLGRPFRPPGSD-IAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKP-----------DWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVH 574
            CA  +D  + +L  +DVW  A K  PRI C  +T    H   V+ ++ TWA  CDG+VAFS+  DP + +  ++H+GPE Y NMWQK RA W Y++ H+  D+D+FL GGDD+FV+VENLR+YLLS EI+         G  P++LGR  RP   D   FNSGGA +VLN  ++ +L   L      +  C+P++   WEDV VA CL + GV  ++ T+DA GRERF P+ P  H  YR P +P           DWY     +  L  GL+ CS+++++FHYV  D M+R + +V+
Sbjct:  174 CA-MNDDHKKMLTHVDVWEGASKTMPRIFCGIFTHRKNHFTKVKAIKETWAVNCDGFVAFSDAADPDLHTFQIEHEGPEEYGNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDEIMHAAGGGINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVGLLASYL-----DEDACQPHKKTSWEDVMVAMCLKKNGVVAFD-TRDASGRERFHPYTPAVHFGYRTPMRPEDRLVSGIVVGDWYIGMAID--LIFGLEGCSSDSLSFHYVDEDLMRRLYHLVY 462          
BLAST of EWM20705.1 vs. NCBI_GenBank
Match: gi|298709509|emb|CBJ48524.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 227.254 bits (578), Expect = 9.125e-64
Identity = 127/311 (40.84%), Postives = 179/311 (57.56%), Query Frame = 0
Query:  298 DGDEDVLRRIDVWPSAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAAT----KEGTEPIFLGRPFRPPGSDI-AFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVPPKPD-----------WYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCPNIKASEGEVAQRAV 592
            D  + +L +  VW  A K  PR+ C  YT    HA  V+ ++ TWA  CDG+VAFS+  D  + +  +KH+GPE Y NMWQK RA W Y++ H+  D+D+F+ GGDD+F++VENLR+YLLS E+  A       GT P++LGR  R  G D   +N+GGA +VLN  ++ +L             C+P+    WEDV +  CL + GV  ++ T+D  GRERF PF PG H  YR PPK +           WY +   +  LK G +CCS ++I+FHYV    M+R H +++ +CP     E EV + AV
Sbjct:  204 DDHKKLLDQTHVWQGARKTTPRVFCGIYTHQNNHATKVKAIKETWASHCDGFVAFSDAADLELQTFMIKHEGPEEYTNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFIIVENLRKYLLSEEVKRAAGGLENGGTTPVYLGRRLRGFGDDNRIYNNGGASYVLNQASVGLLADH-----LDDDDCQPHTKKPWEDVLIGSCLKKNGVEPFD-TRDNLGRERFHPFTPGAHFGYRKPPKLENRHVPGCKVGAWYLIQAID--LKFGRECCSDDSISFHYVDEQLMRRLHDLLY-LCP-----EDEVDEVAV 500          
BLAST of EWM20705.1 vs. NCBI_GenBank
Match: gi|1072234194|gb|OEU18924.1| (hypothetical protein FRACYDRAFT_182810 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 213.386 bits (542), Expect = 3.360e-61
Identity = 114/281 (40.57%), Postives = 169/281 (60.14%), Query Frame = 0
Query:  312 SAEKGKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAATKEGT-----------EPIFLGRPFRPPGS-DIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVP--PKPDWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCP 578
            S+ + + +I C  YT+   H+  + N+R TW  +CDG++  SN+TD  I +V + H+GPE+Y N+WQK+R+ W Y++ ++ + YD+F  GGDD+F++VENLR YL S EI  A   G             P+ LGR F   G  +  F+SGG+G+ +N  +L    K L+  G       P++V F ED  VA  L +  +  Y+ T+D  G ER++PF PGHH  YR+P  P  DWYA Y+    +K GLD C+ +++ FHYVKG+ MKR  A+ +G+CP
Sbjct:    3 SSGQKRDKIFCLVYTIEQGHS-KIPNIRETWGPKCDGFMVGSNKTDVSIGAVHILHEGPESYGNIWQKVRSMWSYIYDNYYEKYDWFHIGGDDLFLIVENLRYYLESEEIRTAANGGIFLPDGHESNKQTPLLLGRRFAYQGDMNEIFDSGGSGYTMNKASL----KLLVTQGFPNYF--PHRVTFSEDTMVAKLLKKEDILPYD-TKDDSGGERYMPFLPGHHYSYRLPSDPSKDWYAKYSIN--IKEGLDHCAPQSVAFHYVKGEMMKRLFALAYGLCP 273          
BLAST of EWM20705.1 vs. NCBI_GenBank
Match: gi|1210521787|dbj|GAX19222.1| (glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [Fistulifera solaris])

HSP 1 Score: 219.935 bits (559), Expect = 2.684e-58
Identity = 127/331 (38.37%), Postives = 191/331 (57.70%), Query Frame = 0
Query:  271 LVDPTVLGRDPPALDHA--DMPGLCAHKSDGDEDVLRRIDVWPSAEK-------GKPRILCFSYTLSTAHAGPVQNLRRTWAQRCDGYVAFSNQTDPLIPSVDLKHKGPEAYANMWQKLRAAWIYLHKHHLQDYDYFLAGGDDIFVVVENLRRYLLSPEILAATK------EGTE----PIFLGRPFRPPG--SDIAFNSGGAGFVLNAPALDVLGKELLGHGKKKRLCRPNQVGFWEDVNVAFCLHEGGVHVYNGTQDAHGRERFLPFKPGHHLRYRVP--PKPDWYAVYTKEWGLKTGLDCCSTEAITFHYVKGDDMKRYHAIVHGMCP 578
            + D T L ++PP    A  ++   CA + +  + +  R+ V    +K        + +I C  YT+ + H   +  +R TW Q+CDG++  SN+TD  + +V++ H+GPE Y N+WQK+R+ W Y++ ++ + YD+F  GGDD++++VENLR YL S EI  A+       +GTE    P+F+GR F   G  +DI F SGG+G+ +N  AL    K L+  G  +    PN   F ED  VA    + GV  Y  T+D +G ER++PF PGHH  YR+P  P  DWYA Y+    +K G + CS +++ FHYVKG  M R HA+++ MCP
Sbjct:  577 VADETALRKNPPDFHMAGEELISECAKRDNNYKMLTERVHVDMEYDKEMAKSGNKRAKIFCLVYTIDSGHPR-IPAIRETWGQKCDGFIVASNKTDVSLGTVNIVHQGPEEYNNIWQKVRSMWSYVYDNYYEKYDFFHIGGDDLYLLVENLREYLESEEIRTASNGGIYLPDGTETVQTPLFMGRRFAYQGDMNDI-FISGGSGYTMNKAAL----KTLVVKGLPEFF--PNAHTFSEDTLVARIFRKFGVLPYE-TKDENGSERYMPFMPGHHWGYRLPADPSADWYAKYS--INIKEGPEHCSPKSVAFHYVKGPAMYRLHALLYKMCP 896          
The following BLAST results are available for this feature:
BLAST of EWM20705.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100537|gb|EWM20705.1|0.000e+0100.00hypothetical protein Naga_100826g2 [Nannochloropsi... [more]
gi|553180570|ref|XP_005853425.1|0.000e+094.46glycoprotein-N-acetylgalactosamine 3-beta-galactos... [more]
gi|298713990|emb|CBJ27222.1|6.040e-8046.28conserved unknown protein [Ectocarpus siliculosus][more]
gi|298706199|emb|CBJ29240.1|9.661e-7442.02conserved unknown protein [Ectocarpus siliculosus][more]
gi|298706200|emb|CBJ29241.1|1.251e-6841.28conserved unknown protein [Ectocarpus siliculosus][more]
gi|223994705|ref|XP_002287036.1|7.027e-6843.53UDP-galactose:N-acetylgalactosamine-alpha-R beta 1... [more]
gi|298706197|emb|CBJ29238.1|3.336e-6742.28conserved unknown protein [Ectocarpus siliculosus][more]
gi|298709509|emb|CBJ48524.1|9.125e-6440.84conserved unknown protein [Ectocarpus siliculosus][more]
gi|1072234194|gb|OEU18924.1|3.360e-6140.57hypothetical protein FRACYDRAFT_182810 [Fragilario... [more]
gi|1210521787|dbj|GAX19222.1|2.684e-5838.37glycoprotein-N-acetylgalactosamine 3-beta-galactos... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9999rna9999Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications