rna9997, rna9997 (mRNA) Nannochloropsis gaditana

Overview
Namerna9997
Unique Namerna9997
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length933
Alignment locationKK037259.1:91027..91974 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100551g1.4019.mrna
Orig protein idgnl|cribi|Naga_100551g1.4019
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:91027..91974 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100551g1gene9699Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20707.1cds9966Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9997rna9997-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9997 ID=rna9997|Name=rna9997|organism=Nannochloropsis gaditana|type=mRNA|length=933bp
CGTCATTACCGTACCCTCCTCAAAACACCTTTCCCTCCAACCCTGTTCCA
ACCCGTACATAGCAAACAAAGCCTCGCTTGGTTTCTGGAGGCTTGACAAC
GCACGCGGGCCGCCCAGAGCCGCTTCAGAGATAGTTCACCGGGGTTGAGT
CCGGACTTAACCTTTCGAACGCACCAGGCATCCGCAGGGAAAAAAAAGAT
GAGCCGCCGCCTGCTAAAATATGGTGGCGAGGCCTTGAAACCTCACTTTG
TGGACGGACGGTGGGAGCGTCCCCTGATTTCAAAGCGCGTGGTAAGCAAA
CGTTTCATCAGTCTCTGCTTCCTGCCTCCCTTCCTCCCTGCCTCCCTTCC
TCCCTTAATCTCTCCCTCATCCCCCTCCTTCCTTCTTTGTATGCAAAGAG
TCCCTGATTTGTTTATTTTTCTGAACCATGTTGCTATTCTCTTCGTCTGT
CAGGCGGCCCGCCTCCGCAAGGAGGCGGTCATGAACGGTCGCGTCGGCCC
ATGGCAGCCCAGCGTTCAGGATTCGAACGGGGAGAAGAGGGAGGGCACGA
AACAGGTCCTGGGATGGGATCCTGCTTGGGACACGGTGAAGGCGCCCAAA
ATATTGAGGCCGGCCAAGCTACACGCGCGGGAGCGGAACCGGGAGGAACG
TTTTCAAAAGATCGAAACGGCGATGGCGGGGATGGCGGCCAAGATCGCTC
AGCACAAAGAGAGCATGCGAGCCTTGAAACCGAAACCGGGGATAGAAACC
TTGTACAAGAAGGTGGTGGCCAAGGCGCAAAAACGCCGGTGAGGTTGGAG
GGCCCGGGTCACGGGGAAGAAGCCAAGCGGGCGCGACCCTTCGATGGATA
TTCCTCCACCAGAGAGGGCGCCCGAAAGCAAACAATAAATACTTTTGAAG
GTGAAGAAATAATGAACATTGCGCTGAGTTTCT
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protein sequence of rna9997

>rna9997-protein ID=rna9997-protein|Name=rna9997|organism=Nannochloropsis gaditana|type=polypeptide|length=229bp
MDAAREEERVARGSVVVEEGGEEGEEGGEVQLVGWGVRLVPPEEAEGAEE
GEKGEGGLQYRQGGNRTNGTGKMGEKHLSPTAQADPAAEEVQGGVEGTPA
DPLLHLALQGSFIHPLPLSPCPTCGSLPHLGFYRWKRSRENGGYKQLGPS
LQALPLRLRQSLPLITPFCPQCDVSSDTNEPVARGGREGQEEREPVGREE
EEAKRRVVYASYRFLGEERGSQGGQKHTS
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mRNA from alignment at KK037259.1:91027..91974-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9997 ID=rna9997|Name=rna9997|organism=Nannochloropsis gaditana|type=mRNA|length=948bp|location=Sequence derived from alignment at KK037259.1:91027..91974- (Nannochloropsis gaditana)
ATGGACGCAGCGAGGGAGGAGGAGAGGGTGGCTCGGGGCAGTGTGGTAGT
GGAAGAGGGGGGAGAGGAGGGCGAGGAAGGGGGGGAGGTGCAGCTTGTCG
GCTGGGGAGTTAGATTGGTCCCTCCTGAGGAAGCGGAGGGGGCGGAGGAG
GGTGAAAAGGGGGAAGGGGGGCTACAGTACAGGCAGGGAGGGAATAGAAC
TAATGGAACAGGGAAGATGGGAGAAAAGCATCTCTCCCCCACAGCTCAGG
CAGACCCGGCGGCGGAGGAGGTGCAGGGAGGAGTGGAGGGCACGCCGGCC
GATCCTCTCTTGCACCTCGCCCTGCAAGGTTCCTTCATTCATCCCCTGCC
CCTCTCGCCCTGTCCTACCTGCGGATCGCTCCCGCATTTGGGTTTCTATC
GCTGGAAACGGAGCCGGGAGAACGGGGGTTACAAGCAGCTGGGGCCCTCA
CTTCAGGCCTTGCCGTTGCGCTTGCGCCAGTCTTTGCCGCTGATCACCCC
TTTTTGCCCGCAATGTGACGTGAGTTCAGATACAAACGAGCCTGTTGCAA
GGGGTGGGAGGGAGGGGCAGGAGGAGAGGGAGCCAGTAGGCAGAGAAGAG
GAAGAGGCGAAGAGACGGGTTGTATATGCATCGTATCGTTTTTTGGGGGA
GGAAAGGGGGAGTCAAGGGGGTCAGAAGCACACGTCATGAACAATTCGCT
TTGGCCATGACTCATAAGCGCGGAGATGTCCATGTACGATGCAGGACCAT
GTGCAAACCTGGAACAACTTGCAGCCCAAAATGCACCCGTCTGGAAGTTT
ATCCGGCAGGAAAACAAAATTTCAGCCGAAAATCGCAAGAATTGAGGGTA
AATGTAAGTAGTACTGCTATACGACTGTTCGTTCAAGTAAAGTATACATA
GTGTAGATGCTGTAGGAGCCAAAGAAGCAAATATCAGGTGCAAATTCT
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Coding sequence (CDS) from alignment at KK037259.1:91027..91974-

>rna9997 ID=rna9997|Name=rna9997|organism=Nannochloropsis gaditana|type=CDS|length=690bp|location=Sequence derived from alignment at KK037259.1:91027..91974- (Nannochloropsis gaditana)
ATGGACGCAGCGAGGGAGGAGGAGAGGGTGGCTCGGGGCAGTGTGGTAGT
GGAAGAGGGGGGAGAGGAGGGCGAGGAAGGGGGGGAGGTGCAGCTTGTCG
GCTGGGGAGTTAGATTGGTCCCTCCTGAGGAAGCGGAGGGGGCGGAGGAG
GGTGAAAAGGGGGAAGGGGGGCTACAGTACAGGCAGGGAGGGAATAGAAC
TAATGGAACAGGGAAGATGGGAGAAAAGCATCTCTCCCCCACAGCTCAGG
CAGACCCGGCGGCGGAGGAGGTGCAGGGAGGAGTGGAGGGCACGCCGGCC
GATCCTCTCTTGCACCTCGCCCTGCAAGGTTCCTTCATTCATCCCCTGCC
CCTCTCGCCCTGTCCTACCTGCGGATCGCTCCCGCATTTGGGTTTCTATC
GCTGGAAACGGAGCCGGGAGAACGGGGGTTACAAGCAGCTGGGGCCCTCA
CTTCAGGCCTTGCCGTTGCGCTTGCGCCAGTCTTTGCCGCTGATCACCCC
TTTTTGCCCGCAATGTGACGTGAGTTCAGATACAAACGAGCCTGTTGCAA
GGGGTGGGAGGGAGGGGCAGGAGGAGAGGGAGCCAGTAGGCAGAGAAGAG
GAAGAGGCGAAGAGACGGGTTGTATATGCATCGTATCGTTTTTTGGGGGA
GGAAAGGGGGAGTCAAGGGGGTCAGAAGCACACGTCATGA
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Synonyms
Publications