EWM20710.1, cds9962 (CDS) Nannochloropsis gaditana

Overview
NameEWM20710.1
Unique Namecds9962
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:77772..78204 -
Alignment locationKK037259.1:77631..77669 -
Alignment locationKK037259.1:77440..77486 -
Alignment locationKK037259.1:76918..77217 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20710.1
Productdual specificity phosphatase cdc25
Orig transcript idgnl|cribi|Naga_100789g2.8988.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:77772..78204 -
KK037259.1supercontigKK037259.1:77631..77669 -
KK037259.1supercontigKK037259.1:77440..77486 -
KK037259.1supercontigKK037259.1:76918..77217 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR001763Rhodanese-like_dom
Homology
BLAST of EWM20710.1 vs. NCBI_GenBank
Match: gi|585100549|gb|EWM20710.1| (dual specificity phosphatase cdc25 [Nannochloropsis gaditana])

HSP 1 Score: 558.525 bits (1438), Expect = 0.000e+0
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0
Query:    1 MPGHPSSSLRVRPDSCNFFRGAFPRPFLFARYFRSSSALLLFLTIPLSICFVRPPGPFSIASLCPSWGTRSIVSNFPRPDARRAFTTFSGTDVHLAMSSSSVSHALSGPAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVEPCE 272
            MPGHPSSSLRVRPDSCNFFRGAFPRPFLFARYFRSSSALLLFLTIPLSICFVRPPGPFSIASLCPSWGTRSIVSNFPRPDARRAFTTFSGTDVHLAMSSSSVSHALSGPAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVEPCE
Sbjct:    1 MPGHPSSSLRVRPDSCNFFRGAFPRPFLFARYFRSSSALLLFLTIPLSICFVRPPGPFSIASLCPSWGTRSIVSNFPRPDARRAFTTFSGTDVHLAMSSSSVSHALSGPAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVEPCE 272          
BLAST of EWM20710.1 vs. NCBI_GenBank
Match: gi|553181145|ref|XP_005853519.1| (hypothetical protein NGA_0435600 [Nannochloropsis gaditana CCMP526] >gi|422295542|gb|EKU22841.1| hypothetical protein NGA_0435600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 314.694 bits (805), Expect = 1.273e-106
Identity = 156/157 (99.36%), Postives = 156/157 (99.36%), Query Frame = 0
Query:    1 MPGHPSSSLRVRPDSCNFFRGAFPRPFLFARYFRSSSALLLFLTIPLSICFVRPPGPFSIASLCPSWGTRSIVSNFPRPDARRAFTTFSGTDVHLAMSSSSVSHALSGPAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSE 157
            MPGHPSSSLRVRPDSCNFFRGAFPRPFLFARYFRSSSALLLFLTIPLS CFVRPPGPFSIASLCPSWGTRSIVSNFPRPDARRAFTTFSGTDVHLAMSSSSVSHALSGPAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSE
Sbjct:    1 MPGHPSSSLRVRPDSCNFFRGAFPRPFLFARYFRSSSALLLFLTIPLSYCFVRPPGPFSIASLCPSWGTRSIVSNFPRPDARRAFTTFSGTDVHLAMSSSSVSHALSGPAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSE 157          
BLAST of EWM20710.1 vs. NCBI_GenBank
Match: gi|814541535|emb|CEQ41021.1| (SPOSA6832_02709 [Sporidiobolus salmonicolor])

HSP 1 Score: 86.6557 bits (213), Expect = 9.053e-17
Identity = 57/170 (33.53%), Postives = 86/170 (50.59%), Query Frame = 0
Query:  111 YIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCA-----------VGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVE 269
            Y++ ++L+ ++   R GE     Q++DVRD+DY    +PGA+  P+ED R E+ V  L + LKD   ++ HC LSQVRGP  +AR+ A                +G    + T ++    + R     T   N   +ER+  +G  QV VLR GF  W   YR +  +VE
Sbjct:   60 YLDHDQLVTVM---RSGESGKDYQVVDVRDEDYRGGNIPGALRAPAED-RTEQSVQDLVQKLKDVPKVIFHCALSQVRGP-KAARIYAQALAEAQAAKADPAPPMGPSAASTTIEQATAEASR-----TFSPNPYAQERK--EGHQQVFVLRDGFANWQGLYRNDPLLVE 217          
BLAST of EWM20710.1 vs. NCBI_GenBank
Match: gi|1069930550|ref|XP_018269039.1| (hypothetical protein RHOBADRAFT_55236 [Rhodotorula graminis WP1] >gi|939610963|gb|KPV72990.1| hypothetical protein RHOBADRAFT_55236 [Rhodotorula graminis WP1])

HSP 1 Score: 84.7297 bits (208), Expect = 1.457e-16
Identity = 60/157 (38.22%), Postives = 87/157 (55.41%), Query Frame = 0
Query:  125 RRGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKK----------ERRREQGVP--QVLVLRGGFQGWYARYREEIGMVE 269
            R+G++     ++DVRDDDY    LPGAI  PSE  R E+ V  L + LKD   ++ HC LSQVRGP  +AR+   ++ AV +    A  Q+++Q   R  G ++L A+ S +          +++R  G    QV VLR GF GW A +R +  +VE
Sbjct:   16 RKGQQGKDYAVVDVRDDDYRGGNLPGAIRAPSEQ-RTEQSVQDLVQQLKDVPTVIFHCTLSQVRGP-KAARI---YADAVSK----AHAQQQHQPGPRPVG-DSLGASASARPADFSPNPFAQQQRTDGADQQQVYVLRDGFAGWQALHRNDPALVE 162          
BLAST of EWM20710.1 vs. NCBI_GenBank
Match: gi|1132461617|gb|OLY82445.1| (Dual specificity phosphatase ibp1 [Smittium mucronatum])

HSP 1 Score: 78.9518 bits (193), Expect = 1.053e-14
Identity = 52/138 (37.68%), Postives = 73/138 (52.90%), Query Frame = 0
Query:  135 ILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVEPCE 272
            ++DVRD DY    +PGA+NVPS + RD  RV  LA+ L D  ++V HC LSQVRGP  SAR+ + +   V         Q  N+S             E+   + REQ   Q+ VL GGF  WY +++ +  M+E  +
Sbjct:   28 VVDVRDSDYEGGHIPGALNVPSYEMRD--RVDGLAKELSDVPILVFHCALSQVRGP-KSARIYSEYVYNV--------IQSNNKSF------------ENYAPKLREQ---QISVLTGGFSSWYNQFKNDPEMLEDID 139          
BLAST of EWM20710.1 vs. NCBI_GenBank
Match: gi|1214713280|gb|OWZ24180.1| (hypothetical protein PHMEG_000833 [Phytophthora megakarya])

HSP 1 Score: 77.411 bits (189), Expect = 4.077e-14
Identity = 52/161 (32.30%), Postives = 76/161 (47.20%), Query Frame = 0
Query:  109 PAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVE 269
            P YI+   L  IL  R  G  S +  I+DVRD D+    +  A+N+P +++ D++ V AL E  KD D +V HCM+SQVRGP C+ R  A     +    GA  K                               P+VL+L GGF+ +   Y++E  ++E
Sbjct:   11 PRYIQPSALAEIL--RDTGSTSKRPVIIDVRDSDFAGGHIRSAVNIPEDNFMDDDDVDALVEKYKDEDAVVFHCMMSQVRGPSCAKRFKARMEVVL---EGANHK-------------------------------PRVLILHGGFERFGRIYKDEADLIE 135          
BLAST of EWM20710.1 vs. NCBI_GenBank
Match: gi|673035708|ref|XP_008871815.1| (hypothetical protein H310_08003 [Aphanomyces invadans] >gi|673035710|ref|XP_008871816.1| hypothetical protein, variant 1 [Aphanomyces invadans] >gi|574472254|gb|ETV99259.1| hypothetical protein H310_08003 [Aphanomyces invadans] >gi|574472255|gb|ETV99260.1| hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 77.411 bits (189), Expect = 4.667e-14
Identity = 50/158 (31.65%), Postives = 74/158 (46.84%), Query Frame = 0
Query:  112 IEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVE 269
            I  +EL+ IL   +  E    ++I+DVRD D+    + GAINVP E + D++ V    E +K    ++ HCM+SQVRGPFC+ R  +  +  + +   AA K                               P+VLVL GGFQ +   Y  +  +VE
Sbjct:   20 ITAKELVEIL---KNPEAKSAVRIVDVRDVDFAGGHIRGAINVPEEHFHDDDEVDNFVEEMKSVPTVIFHCMMSQVRGPFCAGRFQSRMNVVLED---AAVK-------------------------------PKVLVLTGGFQLFRQNYSHDDELVE 140          
BLAST of EWM20710.1 vs. NCBI_GenBank
Match: gi|891598748|ref|XP_013025037.1| (Cdc25 family phosphatase Ibp1 [Schizosaccharomyces cryophilus OY26] >gi|528315978|gb|EPY50557.1| Cdc25 family phosphatase Ibp1 [Schizosaccharomyces cryophilus OY26])

HSP 1 Score: 74.7146 bits (182), Expect = 3.559e-13
Identity = 54/164 (32.93%), Postives = 79/164 (48.17%), Query Frame = 0
Query:  106 LSGPAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVE 269
            +S   YI  E L  +L   R      K+ ++DVRDDDY    +PG+IN+PS+ +     V    E L     IVLHC  SQ+RGP  +AR++                + +N  S +N     LP +E ++   R   +P + +L GGF  W +RY E   M+E
Sbjct:    1 MSSLNYISPESLKDLLAGDRE-----KISVIDVRDDDYEGGHIPGSINIPSKQFL--TLVDEYVEQLLQQKDIVLHCTYSQIRGP-KAARILYE----------TLRYRAQNLCSAKN-----LPVDEKEQFFLR---LPSIYILHGGFLAWKSRYGEIPNMIE 138          
BLAST of EWM20710.1 vs. NCBI_GenBank
Match: gi|301117864|ref|XP_002906660.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262108009|gb|EEY66061.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 74.7146 bits (182), Expect = 3.945e-13
Identity = 51/161 (31.68%), Postives = 75/161 (46.58%), Query Frame = 0
Query:  109 PAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVE 269
            P YI+   L  IL  R     + +  I+DVRD DY    +  A+N+P +++ D++ V  L E  KD D IV HCMLSQVRGP C+ R+ A     +       TK +                             P+VL+L GGF+ +   Y++E  ++E
Sbjct:   11 PHYIQPSALAEIL--RDPNTSNKRPVIIDVRDTDYAGGHIRSAVNIPEDNFMDDDDVDTLVERYKDEDAIVFHCMLSQVRGPSCAKRVKARMEVVL-----EGTKHK-----------------------------PRVLILHGGFERFGRIYKDEADLIE 135          
BLAST of EWM20710.1 vs. NCBI_GenBank
Match: gi|675196977|ref|XP_008907373.1| (hypothetical protein PPTG_13444 [Phytophthora parasitica INRA-310] >gi|566020842|gb|ETI43753.1| hypothetical protein F443_11366 [Phytophthora parasitica P1569] >gi|567958227|gb|ETK83819.1| hypothetical protein L915_11057 [Phytophthora parasitica] >gi|567986919|gb|ETL37234.1| hypothetical protein L916_10955 [Phytophthora parasitica] >gi|568016196|gb|ETL90373.1| hypothetical protein L917_10863 [Phytophthora parasitica] >gi|568046573|gb|ETM43678.1| hypothetical protein L914_10890 [Phytophthora parasitica] >gi|568092188|gb|ETN06997.1| hypothetical protein PPTG_13444 [Phytophthora parasitica INRA-310] >gi|570324481|gb|ETO72429.1| hypothetical protein F444_11436 [Phytophthora parasitica P1976] >gi|570948307|gb|ETP13564.1| hypothetical protein F441_11283 [Phytophthora parasitica CJ01A1] >gi|570981153|gb|ETP41627.1| hypothetical protein F442_11251 [Phytophthora parasitica P10297] >gi|970658691|gb|KUF96429.1| Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A [Phytophthora nicotianae])

HSP 1 Score: 73.559 bits (179), Expect = 9.264e-13
Identity = 50/161 (31.06%), Postives = 75/161 (46.58%), Query Frame = 0
Query:  109 PAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVE 269
            P YI+   L  IL  R     S +  I+DVRD DY    +  A+N+P +++ D++ V AL E  K+ D IV HCM+SQVRGP C+ R  +     +    GA  K                               P+VL+L GG++ +   Y++E  ++E
Sbjct:   11 PHYIQPSALAEIL--RDPSTSSKRPVIIDVRDTDYAGGHIRSAVNIPEDNFMDDDDVDALVEKFKNEDAIVFHCMMSQVRGPSCAKRFKSRMEVVL---EGANHK-------------------------------PRVLILHGGYERFGRIYKDETDLIE 135          
The following BLAST results are available for this feature:
BLAST of EWM20710.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100549|gb|EWM20710.1|0.000e+0100.00dual specificity phosphatase cdc25 [Nannochloropsi... [more]
gi|553181145|ref|XP_005853519.1|1.273e-10699.36hypothetical protein NGA_0435600 [Nannochloropsis ... [more]
gi|814541535|emb|CEQ41021.1|9.053e-1733.53SPOSA6832_02709 [Sporidiobolus salmonicolor][more]
gi|1069930550|ref|XP_018269039.1|1.457e-1638.22hypothetical protein RHOBADRAFT_55236 [Rhodotorula... [more]
gi|1132461617|gb|OLY82445.1|1.053e-1437.68Dual specificity phosphatase ibp1 [Smittium mucron... [more]
gi|1214713280|gb|OWZ24180.1|4.077e-1432.30hypothetical protein PHMEG_000833 [Phytophthora me... [more]
gi|673035708|ref|XP_008871815.1|4.667e-1431.65hypothetical protein H310_08003 [Aphanomyces invad... [more]
gi|891598748|ref|XP_013025037.1|3.559e-1332.93Cdc25 family phosphatase Ibp1 [Schizosaccharomyces... [more]
gi|301117864|ref|XP_002906660.1|3.945e-1331.68conserved hypothetical protein [Phytophthora infes... [more]
gi|675196977|ref|XP_008907373.1|9.264e-1331.06hypothetical protein PPTG_13444 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9993rna9993Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications