rna9993, rna9993 (mRNA) Nannochloropsis gaditana

Overview
Namerna9993
Unique Namerna9993
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length522
Alignment locationKK037259.1:76553..78537 -

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Properties
Property NameValue
Productdual specificity phosphatase cdc25
Orig transcript idgnl|cribi|Naga_100789g2.8988.mrna
Orig protein idgnl|cribi|Naga_100789g2.8988
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:76553..78537 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100789g2gene9695Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9993rna9993-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20710.1cds9962Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9993 ID=rna9993|Name=rna9993|organism=Nannochloropsis gaditana|type=mRNA|length=522bp
ATGTCTGAGACGCGTCATCCGGTGAGAAGGAGGGAGGGAGGGAGCTTCCT
CTTGCACTCCTTGGACGTGCCGAGGGAGCTGGCCTCCATCGGGGGTATTC
CTACCTCCCCCTCCGCCTCCTCCAGCCTGTCCTTCTTCCCTTCCAAGTCC
ATCACCCACGTTTCCTCCACCGCCAGTCATGCCAAGAAGAGCTCCGAGTC
GCTGGGCGAGAGCAGGCAGGGTGGACGACGGAAAGGAGGGAGGGAGGGGA
GGGGAGATCTCGTCCGAATGGATAAGAGTCTATCCCTCTCGTTCTCGGGC
GTCAAGGAAGAGGACTGGGAGTCTCTTGATGACAGTGTGAGGGAATCGAA
ATGGGAAAATCGTACTGGCGAGATGCTTCAACTCAAGCGTCGGCGTGGCT
ATCACCGTAGAAGTTTTCTCATTACCGCCAGTCTGGTGACGCCTCAAAAT
TTAGGAAATCACAATTTAAAGAAACACCGATCACATCATTTGAAACAAAT
AAATGAGATGAGGAGAGCATGA
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protein sequence of rna9993

>rna9993-protein ID=rna9993-protein|Name=rna9993|organism=Nannochloropsis gaditana|type=polypeptide|length=272bp
MPGHPSSSLRVRPDSCNFFRGAFPRPFLFARYFRSSSALLLFLTIPLSIC
FVRPPGPFSIASLCPSWGTRSIVSNFPRPDARRAFTTFSGTDVHLAMSSS
SVSHALSGPAYIEQEELLAILHARRRGERSLKLQILDVRDDDYTVAKLPG
AINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHF
SCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVL
RGGFQGWYARYREEIGMVEPCE
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mRNA from alignment at KK037259.1:76553..78537-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9993 ID=rna9993|Name=rna9993|organism=Nannochloropsis gaditana|type=mRNA|length=1985bp|location=Sequence derived from alignment at KK037259.1:76553..78537- (Nannochloropsis gaditana)
CTCCTGCTGTTGCGTTTTATAAAAACACTTGCAACAGGGCCAGAGCTGTT
CTAACCCCGGAACTCCGTCAAAAATCTCGAACTTTATTTAAAATGTCTGC
ATGTATTCTCTGCTTTTGTCGCTCTTTTTTCCATCGTTTCCCTCGCATCA
TGCATTGCTTACAAAGCGGGCAAATTTTACGAGATTTCGTCCTCATCTTC
CTCCAATTTCTATTTTCCCGTCCCATTTGTCCCATCAGGATCTAGGAGAC
AACGTATCTGCTTCCTCATCTGATTTCACAACGGCTTTCCAGGCCTTTAT
ACGCCTTTGTGGAAAACCTTCGGGGCCTGGTGTATGCCGGGACACCCCTC
CTCGTCTCTCCGCGTTCGACCAGACAGCTGCAACTTTTTCCGCGGCGCCT
TCCCCCGACCTTTTCTGTTCGCTCGCTACTTTCGTTCCTCCTCTGCCCTT
CTTCTCTTTTTGACAATACCGCTTTCTATTTGTTTTGTGAGGCCTCCAGG
ACCCTTTTCCATAGCCAGCCTCTGCCCTTCATGGGGGACAAGGAGCATCG
TTAGCAACTTTCCACGTCCTGACGCGAGGCGAGCCTTCACGACATTCAGC
GGCACCGACGTCCACCTGGCCATGTCTTCCTCCTCCGTGTCCCATGCTCT
TTCAGGCCCTGCATACATCGAGCAAGAAGAGCTACTCGCGATTCTTCACG
CCCGACGCCGCGGAGAGCGTTCTCTCAAGCTTCAAATCTTGGACGTGCGC
GACGACGACTACACAGGTGGAGAAAGGACGGGGGGATGTGTGGAATTGAT
GGAGACAAGGGAGAAAGAAGAGCTCATTTTTGATTTTTTTCCCGCTCTTT
AATTTCGCCAAATGGCAGTGGCAAAGCTTCCCGGGGCAATCAACGTGCCC
AGCGAAGGTGCGTAGGGCAGAGACAGGTGGAAAGAACGAGCATCAGGGGA
AAAGAGTCCTCCCTCCGTTTTATACCGGTATTCTTACATTGGAAACATTG
AACTGAGATCGGTTCTTTGACATCTTCAACCTGTTGCGTCCACACACACA
GACTGGCGGGATGAGGAGCGAGTCGTCGCCCTCGCTGAGTCCTTGAAGGT
AGGACAATTAGAGGGCTGCCCCTTTCATCTCTCTGGACCTTCGTCGTGGG
CCATGCACGCACACGGGAGTAGGGATCTTGTGCGCCGGGCTGAGGGACGT
CTCTTTGGTCTTATACTATCGTTCTCTTGTTTTTTGGGTGTCCCTTCAGT
CCCGCCCTGTGTTCCAAGCCATTCAGTCATGACACCCTCTTTTCTCACTC
CTGCCTGTATTCTTTGCCAGGACCATGACATGATTGTGCTCCATTGCATG
CTTTCCCAAGTCCGGGGACCCTTTTGCAGCGCTCGTTTGATGGCGCACTT
TTCTTGCGCGGTGGGGGAGGATGGAGGGGCGGCCACGAAACAGGAACGGA
ATCAGAGCAGCGGCCGAAACGACGGGGAGGAAACATTGCCGGCGAATGAA
AGTAAAAAAGAGAGAAGGCGAGAACAGGGGGTTCCACAGGTCTTGGTCCT
CCGAGGGGGGTTTCAGGGATGGTATGCACGGTACCGGGAGGAGATAGGGA
TGGTGGAACCGTGTGAATGACAAGGTAAAGTTGTTGGCCCTCTCACGGGG
AGACATCTAAGCATTTGGGGGCGATTTTTTTAAACATATAGTTCGTGAAT
GGCACGAAGTATCTCAGTTTCGTGTCTTTTACGTCGAGGTTCAATAGGGA
AGCAATGAAATGATTGCATTGAGACCTCTTGAGTGAAATTTGAGAAATGG
GGAGAAATACGAGCCTCCCCTCCTCCGGAAAAAACTTCCTGTCCACTTGG
GGCATAATCACTACCGCGCACTATTTTCCTTTTATCAACTTATATCGAGG
GAGATATTGTCAGGATAAAAAGACACAACTCAATTGAAGCCGATCAAGAA
AAAGTTTGATATAGAACACAACGGTCGGCCGCTGC
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Coding sequence (CDS) from alignment at KK037259.1:76553..78537-

>rna9993 ID=rna9993|Name=rna9993|organism=Nannochloropsis gaditana|type=CDS|length=3276bp|location=Sequence derived from alignment at KK037259.1:76553..78537- (Nannochloropsis gaditana)
GACCATGACATGATTGTGCTCCATTGCATGCTTTCCCAAGTCCGGGGACC
CTTTTGCAGCGCTCGTTTGATGGCGCACTTTTCTTGCGCGGTGGGGGAGG
ATGGAGGGGCGGCCACGAAACAGGAACGGAATCAGAGCAGCGGCCGAAAC
GACGGGGAGGAAACATTGCCGGCGAATGAAAGTAAAAAAGAGAGAAGGCG
AGAACAGGGGGTTCCACAGGTCTTGGTCCTCCGAGGGGGGTTTCAGGGAT
GGTATGCACGGTACCGGGAGGAGATAGGGATGGTGGAACCGTGTGAATGA
ACTGGCGGGATGAGGAGCGAGTCGTCGCCCTCGCTGAGTCCTTGAAGTGG
CAAAGCTTCCCGGGGCAATCAACGTGCCCAGCGAAGATGCCGGGACACCC
CTCCTCGTCTCTCCGCGTTCGACCAGACAGCTGCAACTTTTTCCGCGGCG
CCTTCCCCCGACCTTTTCTGTTCGCTCGCTACTTTCGTTCCTCCTCTGCC
CTTCTTCTCTTTTTGACAATACCGCTTTCTATTTGTTTTGTGAGGCCTCC
AGGACCCTTTTCCATAGCCAGCCTCTGCCCTTCATGGGGGACAAGGAGCA
TCGTTAGCAACTTTCCACGTCCTGACGCGAGGCGAGCCTTCACGACATTC
AGCGGCACCGACGTCCACCTGGCCATGTCTTCCTCCTCCGTGTCCCATGC
TCTTTCAGGCCCTGCATACATCGAGCAAGAAGAGCTACTCGCGATTCTTC
ACGCCCGACGCCGCGGAGAGCGTTCTCTCAAGCTTCAAATCTTGGACGTG
CGCGACGACGACTACACAGGACCATGACATGATTGTGCTCCATTGCATGC
TTTCCCAAGTCCGGGGACCCTTTTGCAGCGCTCGTTTGATGGCGCACTTT
TCTTGCGCGGTGGGGGAGGATGGAGGGGCGGCCACGAAACAGGAACGGAA
TCAGAGCAGCGGCCGAAACGACGGGGAGGAAACATTGCCGGCGAATGAAA
GTAAAAAAGAGAGAAGGCGAGAACAGGGGGTTCCACAGGTCTTGGTCCTC
CGAGGGGGGTTTCAGGGATGGTATGCACGGTACCGGGAGGAGATAGGGAT
GGTGGAACCGTGTGAATGAACTGGCGGGATGAGGAGCGAGTCGTCGCCCT
CGCTGAGTCCTTGAAGTGGCAAAGCTTCCCGGGGCAATCAACGTGCCCAG
CGAAGATGCCGGGACACCCCTCCTCGTCTCTCCGCGTTCGACCAGACAGC
TGCAACTTTTTCCGCGGCGCCTTCCCCCGACCTTTTCTGTTCGCTCGCTA
CTTTCGTTCCTCCTCTGCCCTTCTTCTCTTTTTGACAATACCGCTTTCTA
TTTGTTTTGTGAGGCCTCCAGGACCCTTTTCCATAGCCAGCCTCTGCCCT
TCATGGGGGACAAGGAGCATCGTTAGCAACTTTCCACGTCCTGACGCGAG
GCGAGCCTTCACGACATTCAGCGGCACCGACGTCCACCTGGCCATGTCTT
CCTCCTCCGTGTCCCATGCTCTTTCAGGCCCTGCATACATCGAGCAAGAA
GAGCTACTCGCGATTCTTCACGCCCGACGCCGCGGAGAGCGTTCTCTCAA
GCTTCAAATCTTGGACGTGCGCGACGACGACTACACAGGACCATGACATG
ATTGTGCTCCATTGCATGCTTTCCCAAGTCCGGGGACCCTTTTGCAGCGC
TCGTTTGATGGCGCACTTTTCTTGCGCGGTGGGGGAGGATGGAGGGGCGG
CCACGAAACAGGAACGGAATCAGAGCAGCGGCCGAAACGACGGGGAGGAA
ACATTGCCGGCGAATGAAAGTAAAAAAGAGAGAAGGCGAGAACAGGGGGT
TCCACAGGTCTTGGTCCTCCGAGGGGGGTTTCAGGGATGGTATGCACGGT
ACCGGGAGGAGATAGGGATGGTGGAACCGTGTGAATGAACTGGCGGGATG
AGGAGCGAGTCGTCGCCCTCGCTGAGTCCTTGAAGTGGCAAAGCTTCCCG
GGGCAATCAACGTGCCCAGCGAAGATGCCGGGACACCCCTCCTCGTCTCT
CCGCGTTCGACCAGACAGCTGCAACTTTTTCCGCGGCGCCTTCCCCCGAC
CTTTTCTGTTCGCTCGCTACTTTCGTTCCTCCTCTGCCCTTCTTCTCTTT
TTGACAATACCGCTTTCTATTTGTTTTGTGAGGCCTCCAGGACCCTTTTC
CATAGCCAGCCTCTGCCCTTCATGGGGGACAAGGAGCATCGTTAGCAACT
TTCCACGTCCTGACGCGAGGCGAGCCTTCACGACATTCAGCGGCACCGAC
GTCCACCTGGCCATGTCTTCCTCCTCCGTGTCCCATGCTCTTTCAGGCCC
TGCATACATCGAGCAAGAAGAGCTACTCGCGATTCTTCACGCCCGACGCC
GCGGAGAGCGTTCTCTCAAGCTTCAAATCTTGGACGTGCGCGACGACGAC
TACACAGGACCATGACATGATTGTGCTCCATTGCATGCTTTCCCAAGTCC
GGGGACCCTTTTGCAGCGCTCGTTTGATGGCGCACTTTTCTTGCGCGGTG
GGGGAGGATGGAGGGGCGGCCACGAAACAGGAACGGAATCAGAGCAGCGG
CCGAAACGACGGGGAGGAAACATTGCCGGCGAATGAAAGTAAAAAAGAGA
GAAGGCGAGAACAGGGGGTTCCACAGGTCTTGGTCCTCCGAGGGGGGTTT
CAGGGATGGTATGCACGGTACCGGGAGGAGATAGGGATGGTGGAACCGTG
TGAATGAACTGGCGGGATGAGGAGCGAGTCGTCGCCCTCGCTGAGTCCTT
GAAGTGGCAAAGCTTCCCGGGGCAATCAACGTGCCCAGCGAAGATGCCGG
GACACCCCTCCTCGTCTCTCCGCGTTCGACCAGACAGCTGCAACTTTTTC
CGCGGCGCCTTCCCCCGACCTTTTCTGTTCGCTCGCTACTTTCGTTCCTC
CTCTGCCCTTCTTCTCTTTTTGACAATACCGCTTTCTATTTGTTTTGTGA
GGCCTCCAGGACCCTTTTCCATAGCCAGCCTCTGCCCTTCATGGGGGACA
AGGAGCATCGTTAGCAACTTTCCACGTCCTGACGCGAGGCGAGCCTTCAC
GACATTCAGCGGCACCGACGTCCACCTGGCCATGTCTTCCTCCTCCGTGT
CCCATGCTCTTTCAGGCCCTGCATACATCGAGCAAGAAGAGCTACTCGCG
ATTCTTCACGCCCGACGCCGCGGAGAGCGTTCTCTCAAGCTTCAAATCTT
GGACGTGCGCGACGACGACTACACAG
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Synonyms
Publications