EWM20712.1, cds9960 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|585100555|gb|EWM20712.1| (hypothetical protein Naga_101419g2 [Nannochloropsis gaditana]) HSP 1 Score: 496.893 bits (1278), Expect = 1.515e-177 Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0 Query: 1 MKVTVRTRGSSHQKASFCLLAAVLTAKAFQVPSLPCALPSTSSLPRSHYSSDPPLCQRTRIPAASPFLSVAFGHRVRRRGPPLVFSQSLMDTIITPTRIESLPGFTVVERIDGLAFVRYNHSTSSPSSTPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLLALGTGRARALVRYEGGREGGRARG 249 MKVTVRTRGSSHQKASFCLLAAVLTAKAFQVPSLPCALPSTSSLPRSHYSSDPPLCQRTRIPAASPFLSVAFGHRVRRRGPPLVFSQSLMDTIITPTRIESLPGFTVVERIDGLAFVRYNHSTSSPSSTPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLLALGTGRARALVRYEGGREGGRARG Sbjct: 1 MKVTVRTRGSSHQKASFCLLAAVLTAKAFQVPSLPCALPSTSSLPRSHYSSDPPLCQRTRIPAASPFLSVAFGHRVRRRGPPLVFSQSLMDTIITPTRIESLPGFTVVERIDGLAFVRYNHSTSSPSSTPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLLALGTGRARALVRYEGGREGGRARG 249
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|504987572|ref|WP_015174674.1| (alpha/beta hydrolase [Oscillatoria nigro-viridis] >gi|428239558|gb|AFZ05344.1| alpha/beta hydrolase fold protein [Oscillatoria nigro-viridis PCC 7112]) HSP 1 Score: 68.5514 bits (166), Expect = 5.068e-10 Identity = 38/97 (39.18%), Postives = 54/97 (55.67%), Query Frame = 0 Query: 129 TPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLL 225 TP R ++LPG+DGSG L PQIS L FD+ L++PADD ++ +V I +E ++ AG+ + L GESFGG LA+ +L Sbjct: 12 TPKPPKPDRPLFVFLPGMDGSGLLLRPQISKLANHFDIRCLTVPADDMASWEVLVSETIALIEAEKQ-----AGKPKRPVYLCGESFGGCLAMKTVL 103
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|693498994|emb|CEG01641.1| (Diacylglycerol acyltransferase [Ostreococcus tauri]) HSP 1 Score: 68.9366 bits (167), Expect = 9.716e-10 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 0 Query: 116 FVRYNHSTSSPSSTPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHV 223 VR S+ +ST P A +YLPGLDG+G + Q +V EFD+ L++PA DR + +V+ V +LE R E ++ LIGES GGLL++ V Sbjct: 31 LVRSRERASTSASTKPLA-------VYLPGLDGTGFSAASQFEYIVNEFDLVALNVPASDRGDIFDLVNVVTSYLEARAERSDVY---------LIGESMGGLLSLCV 122
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|1199292077|gb|OUS47167.1| (Alpha/Beta hydrolase protein [Ostreococcus tauri]) HSP 1 Score: 68.1662 bits (165), Expect = 1.513e-9 Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 0 Query: 116 FVRYNHSTSSPSSTPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHV 223 VR S+ +ST P A +YLPGLDG+G + Q +V EFD+ L++PA DR + +V+ V +LE R E ++ LIGES GGLL++ V Sbjct: 83 LVRSRERASTSASTKPLA-------VYLPGLDGTGFSAASQFEYIVNEFDLVALNVPASDRGDIFDLVNVVTSYLEARAERGDVY---------LIGESMGGLLSLCV 174
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|298713739|emb|CBJ48930.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 67.781 bits (164), Expect = 2.580e-9 Identity = 48/134 (35.82%), Postives = 78/134 (58.21%), Query Frame = 0 Query: 111 IDGLAFVRYNHSTS----SPSSTPPAASGKRGE-----VLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLLALGTGRARAL 235 I G++F R+ + + SPS+T AA+G + + +LYLPG++G G ++ PQ+ L ++FDV+ L I A+DRS S + AV + ++ E G ++ V++GESFG +L I L L GR +A+ Sbjct: 108 ILGVSFERWRKNDANGPASPSATGGAANGSKVDGDKMVLLYLPGIEGLGTSVEPQLPALSEKFDVFRLIIGAEDRSTFSTLSRAVTQFVDVTSGE----GGGNQKKTVVLGESFGAMLGIR-LGQLRPGRVQAV 236
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|553180778|ref|XP_005853461.1| (hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526] >gi|422295599|gb|EKU22898.1| hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 63.1586 bits (152), Expect = 8.076e-8 Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 0 Query: 131 PAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLL 225 PA+S + +LYLPGLDGSG T Q L + F+V +++P DRS+ ++H V R E RS R ++GESFGGLLA+ +L Sbjct: 528 PASSPSKPLLLYLPGLDGSGLTAFVQYPSLAEAFEVRCMTMPTTDRSSFLDLIHLV------RTEIRSFPGRRV----FVMGESFGGLLALGTVL 612
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|612399772|ref|XP_007515405.1| (predicted protein [Bathycoccus prasinos] >gi|412993773|emb|CCO14284.1| predicted protein [Bathycoccus prasinos]) HSP 1 Score: 62.7734 bits (151), Expect = 1.126e-7 Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 0 Query: 140 VLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLL 225 ++YLPGLDG+G + Q + L +EFD+ L+IP++DRS + ++V V +E +EE H R+ LIGES GG +++ V L Sbjct: 106 MIYLPGLDGTGFSASSQFATLSKEFDLVCLNIPSNDRSDVFEIVDIVRAFIERAKEE---HPEREVQ---LIGESMGGAMSLFVCL 185
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|629089533|gb|KCW55786.1| (hypothetical protein EUGRSUZ_I01613 [Eucalyptus grandis]) HSP 1 Score: 62.7734 bits (151), Expect = 1.269e-7 Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 0 Query: 126 PSSTPPAASGKRGE----VLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDR--HCPV-LIGESFGGLLAIHV 223 P P G R E +LYLPGLDG+G L Q L + FD+W L IP DR++ +V V ER++ A DR + P+ L+GES GG LA+ V Sbjct: 122 PRWFSPLECGSRLEKSPLLLYLPGLDGTGAGLTSQYKKLGKVFDIWCLHIPVMDRTSFLDLVRMV---------ERTIKAETDRSPNRPIYLVGESLGGCLALAV 217
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|702464632|ref|XP_010028956.1| (PREDICTED: acyltransferase-like protein At3g26840, chloroplastic [Eucalyptus grandis]) HSP 1 Score: 62.7734 bits (151), Expect = 1.275e-7 Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 0 Query: 126 PSSTPPAASGKRGE----VLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDR--HCPV-LIGESFGGLLAIHV 223 P P G R E +LYLPGLDG+G L Q L + FD+W L IP DR++ +V V ER++ A DR + P+ L+GES GG LA+ V Sbjct: 133 PRWFSPLECGSRLEKSPLLLYLPGLDGTGAGLTSQYKKLGKVFDIWCLHIPVMDRTSFLDLVRMV---------ERTIKAETDRSPNRPIYLVGESLGGCLALAV 228
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|493683066|ref|WP_006633214.1| (alpha/beta hydrolase [Microcoleus vaginatus] >gi|333459043|gb|EGK87658.1| alpha/beta hydrolase fold-containing protein [Microcoleus vaginatus FGP-2]) HSP 1 Score: 61.6178 bits (148), Expect = 1.362e-7 Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 0 Query: 129 TPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLL 225 TP R ++LPG+DG G L QI L FD+ L++PADD + +V I +E ++ AG+ + L GESFGG LA+ V+L Sbjct: 12 TPKPPKPDRPLFVFLPGMDGGGLLLRSQIPKLANHFDIRCLTLPADDTPSWDVLVGETIALIEAEKQ-----AGKPKRPVYLCGESFGGCLAMKVML 103 The following BLAST results are available for this feature:
BLAST of EWM20712.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|