EWM20725.1, cds9949 (CDS) Nannochloropsis gaditana

Overview
NameEWM20725.1
Unique Namecds9949
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:43325..43375 -
Alignment locationKK037259.1:43058..43203 -
Alignment locationKK037259.1:42800..42864 -
Alignment locationKK037259.1:42414..42493 -
Alignment locationKK037259.1:41902..42036 -
Alignment locationKK037259.1:41596..41730 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20725.1
Productserine threonine kinase isoform cra_a
Orig transcript idgnl|cribi|Naga_100970g2.10375.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:43325..43375 -
KK037259.1supercontigKK037259.1:43058..43203 -
KK037259.1supercontigKK037259.1:42800..42864 -
KK037259.1supercontigKK037259.1:42414..42493 -
KK037259.1supercontigKK037259.1:41902..42036 -
KK037259.1supercontigKK037259.1:41596..41730 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR008271Ser/Thr_kinase_AS
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
BLAST of EWM20725.1 vs. NCBI_GenBank
Match: gi|585100577|gb|EWM20725.1| (serine threonine kinase isoform cra_a [Nannochloropsis gaditana])

HSP 1 Score: 419.853 bits (1078), Expect = 1.371e-148
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query:    1 MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRANTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203
            MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRANTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK
Sbjct:    1 MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRANTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203          
BLAST of EWM20725.1 vs. NCBI_GenBank
Match: gi|585100576|gb|EWM20724.1| (serine threonine kinase isoform cra_a [Nannochloropsis gaditana])

HSP 1 Score: 420.239 bits (1079), Expect = 7.165e-148
Identity = 202/203 (99.51%), Postives = 202/203 (99.51%), Query Frame = 0
Query:    1 MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRANTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203
            MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRANTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGIL 
Sbjct:    1 MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRANTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILN 203          
BLAST of EWM20725.1 vs. NCBI_GenBank
Match: gi|1173953590|gb|OQS01122.1| (protein kinase [Achlya hypogyna])

HSP 1 Score: 177.563 bits (449), Expect = 5.410e-49
Identity = 95/201 (47.26%), Postives = 125/201 (62.19%), Query Frame = 0
Query:    7 EAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAI----DRANTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203
            E   DAA E +VL+ V+HP+LL LL    +R++ G H C    FL P+   G++ D I    D AN  WPFTE   L    GIC GL ALHE   AH D+KPHNVLLS +  P+LMDFGS C+P    VT+RR  + +++ A  KCS  YR PEL +      ++ + DVW++GC+LYC+A+G SPFESP EG +RL  + 
Sbjct:  344 EVEADAAIEREVLQTVEHPNLLHLLQYGESRAN-GKHEC---LFLLPYHDHGTIFDEIQAANDNANEPWPFTELRCLHILEGICLGLSALHEAGFAHRDLKPHNVLLSARDHPILMDFGS-CAPLVTEVTDRRKLMEVQDDANRKCSAPYRAPELFEPEIGHRINGQADVWSLGCILYCMAFGTSPFESPREGFMRLAAMN 539          
BLAST of EWM20725.1 vs. NCBI_GenBank
Match: gi|813178002|ref|XP_012205470.1| (NAK/MPSK protein kinase [Saprolegnia parasitica CBS 223.65] >gi|641529676|gb|KDO23837.1| NAK/MPSK protein kinase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 173.711 bits (439), Expect = 4.133e-48
Identity = 93/201 (46.27%), Postives = 123/201 (61.19%), Query Frame = 0
Query:    7 EAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRANTK----WPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203
            E   DAA E +VL+ V+HP+LL LL    +RS+ G H C    FL P+   G++ D I  AN      WPF E   L    GIC GLLALHE   AH D+KPHNVLL  +  P+LMDFGSC +P    +T+RR  + +++ A  KCS  YR PEL +      ++ + DVW++GC+LYC+A+G SPFESP EG +RL  + 
Sbjct:  267 EVEADAAIEREVLQTVEHPNLLHLLQYGESRSN-GKHEC---LFLLPYHDHGTIFDEIQAANDNSAEPWPFMELRCLHILEGICLGLLALHEAGFAHRDLKPHNVLLGIRDHPILMDFGSC-APLVTEITDRRKLMDVQDDANRKCSAPYRAPELFEPEIGHRINGQSDVWSLGCILYCMAFGSSPFESPREGFMRLAAMN 462          
BLAST of EWM20725.1 vs. NCBI_GenBank
Match: gi|669158800|ref|XP_008614962.1| (NAK/MPSK protein kinase [Saprolegnia diclina VS20] >gi|530733321|gb|EQC31563.1| NAK/MPSK protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 171.785 bits (434), Expect = 2.184e-47
Identity = 91/201 (45.27%), Postives = 123/201 (61.19%), Query Frame = 0
Query:    7 EAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRANTK----WPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203
            E   DAA E +VL+ V+HP+LL LL    +R++ G H C    FL P+   G++ D +  AN      WPF E   L    GIC GLLALHE   AH D+KPHNVLL  +  P+LMDFGSC +P    +T+RR  + +++ A  KCS  YR PEL +      ++ + DVW++GC+LYC+A+G SPFESP EG +RL  + 
Sbjct:  273 EVEADAAIEREVLQTVEHPNLLHLLQYGESRTN-GKHEC---LFLLPYHDHGTIFDEVQAANDNAAEPWPFMELRCLHILEGICLGLLALHEAGFAHRDLKPHNVLLGVRDHPILMDFGSC-APLVTEITDRRKLMDVQDDANRKCSAPYRAPELFEPEIGHRINGQSDVWSLGCILYCMAFGSSPFESPREGFMRLAAMN 468          
BLAST of EWM20725.1 vs. NCBI_GenBank
Match: gi|301117892|ref|XP_002906674.1| (protein kinase [Phytophthora infestans T30-4] >gi|262108023|gb|EEY66075.1| protein kinase [Phytophthora infestans T30-4])

HSP 1 Score: 170.244 bits (430), Expect = 2.038e-46
Identity = 92/215 (42.79%), Postives = 126/215 (58.60%), Query Frame = 0
Query:    1 MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRA----NTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQGQ--------PLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203
            +LC  +E   D   EL+V R+V+H +++PL++    R  +G     E  FL P+  RGSL DAID A    +  WPFT+R  L  F GIC G+LALH     H DIKPHN+LLS            P++ DFGSC +P    V  RR +L L+++A  K S  YR PEL +   +V +D + DVW++GC+LY +A+G SPFE P EG ++L  L 
Sbjct:  314 ILCQSQEVENDVQMELQVFRSVKHLNIMPLVEFSEARVQQG----MEFYFLVPYFERGSLWDAIDAACQSSSPLWPFTQRTALHLFHGICAGVLALHRAGFCHRDIKPHNILLSSSSTGEDFLAYIPVVTDFGSC-APIRVEVNSRRNSLELQDEANRKSSAPYRAPELFEPTVDVALDGQSDVWSLGCVLYTMAFGTSPFEHPREGFMKLACLN 523          
BLAST of EWM20725.1 vs. NCBI_GenBank
Match: gi|566020873|gb|ETI43784.1| (NAK/MPSK protein kinase [Phytophthora parasitica P1569] >gi|567986949|gb|ETL37264.1| NAK/MPSK protein kinase [Phytophthora parasitica] >gi|568046603|gb|ETM43708.1| NAK/MPSK protein kinase [Phytophthora parasitica] >gi|570324512|gb|ETO72460.1| NAK/MPSK protein kinase [Phytophthora parasitica P1976])

HSP 1 Score: 168.318 bits (425), Expect = 1.877e-45
Identity = 92/215 (42.79%), Postives = 128/215 (59.53%), Query Frame = 0
Query:    1 MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRA----NTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQ--GQ------PLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203
            +LC  +E   D   EL+V R+V+H +++PL++    R  +G     E  FL P+  RGSL DAI+ A    +  WPFT+R  L  F GIC G+LALH     H DIKPHN+LLS    G+      P++ DFGSC +P    V  RR +L L+++A  K S  YR PEL +   +V +D + DVW++GC+LY +A+G SPFE P EG ++L  L 
Sbjct:  348 ILCQSQEVENDVQMELQVFRSVKHLNIMPLVEFSEARVQQG----MEFYFLVPYFERGSLWDAINAACQSSSPLWPFTQRTALHLFHGICSGVLALHRSGFCHRDIKPHNILLSSSFSGEDFLAYIPVVTDFGSC-APIRVEVNSRRNSLELQDEANRKSSAPYRAPELFEPTVDVALDGQSDVWSLGCVLYTMAFGTSPFEHPREGFMKLACLN 557          
BLAST of EWM20725.1 vs. NCBI_GenBank
Match: gi|570981184|gb|ETP41658.1| (NAK/MPSK protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 168.318 bits (425), Expect = 1.997e-45
Identity = 92/215 (42.79%), Postives = 128/215 (59.53%), Query Frame = 0
Query:    1 MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRA----NTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQ--GQ------PLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203
            +LC  +E   D   EL+V R+V+H +++PL++    R  +G     E  FL P+  RGSL DAI+ A    +  WPFT+R  L  F GIC G+LALH     H DIKPHN+LLS    G+      P++ DFGSC +P    V  RR +L L+++A  K S  YR PEL +   +V +D + DVW++GC+LY +A+G SPFE P EG ++L  L 
Sbjct:  348 ILCQSQEVENDVQMELQVFRSVKHLNIMPLVEFSEARVQQG----MEFYFLVPYFERGSLWDAINAACQSSSPLWPFTQRTALHLFHGICSGVLALHRSGFCHRDIKPHNILLSSSFSGEDFLAYIPVVTDFGSC-APIRVEVNSRRNSLELQDEANRKSSAPYRAPELFEPTVDVALDGQSDVWSLGCVLYTMAFGTSPFEHPREGFMKLACLN 557          
BLAST of EWM20725.1 vs. NCBI_GenBank
Match: gi|567958257|gb|ETK83849.1| (NAK/MPSK protein kinase [Phytophthora parasitica])

HSP 1 Score: 168.318 bits (425), Expect = 2.017e-45
Identity = 92/215 (42.79%), Postives = 128/215 (59.53%), Query Frame = 0
Query:    1 MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRA----NTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQ--GQ------PLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203
            +LC  +E   D   EL+V R+V+H +++PL++    R  +G     E  FL P+  RGSL DAI+ A    +  WPFT+R  L  F GIC G+LALH     H DIKPHN+LLS    G+      P++ DFGSC +P    V  RR +L L+++A  K S  YR PEL +   +V +D + DVW++GC+LY +A+G SPFE P EG ++L  L 
Sbjct:  348 ILCQSQEVENDVQMELQVFRSVKHLNIMPLVEFSEARVQQG----MEFYFLVPYFERGSLWDAINAACQSSSPLWPFTQRTALHLFHGICSGVLALHRSGFCHRDIKPHNILLSSSFSGEDFLAYIPVVTDFGSC-APIRVEVNSRRNSLELQDEANRKSSAPYRAPELFEPTVDVALDGQSDVWSLGCVLYTMAFGTSPFEHPREGFMKLACLN 557          
BLAST of EWM20725.1 vs. NCBI_GenBank
Match: gi|568016226|gb|ETL90403.1| (NAK/MPSK protein kinase [Phytophthora parasitica] >gi|570948338|gb|ETP13595.1| NAK/MPSK protein kinase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 167.933 bits (424), Expect = 2.059e-45
Identity = 92/215 (42.79%), Postives = 128/215 (59.53%), Query Frame = 0
Query:    1 MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAFLFPFCRRGSLTDAIDRA----NTKWPFTEREVLRTFFGICQGLLALHEHDIAHWDIKPHNVLLSDQ--GQ------PLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSPAYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLGILK 203
            +LC  +E   D   EL+V R+V+H +++PL++    R  +G     E  FL P+  RGSL DAI+ A    +  WPFT+R  L  F GIC G+LALH     H DIKPHN+LLS    G+      P++ DFGSC +P    V  RR +L L+++A  K S  YR PEL +   +V +D + DVW++GC+LY +A+G SPFE P EG ++L  L 
Sbjct:  348 ILCQSQEVENDVQMELQVFRSVKHLNIMPLVEFSEARVQQG----MEFYFLVPYFERGSLWDAINAACQSSSPLWPFTQRTALHLFHGICSGVLALHRSGFCHRDIKPHNILLSSSFSGEDFLAYIPVVTDFGSC-APIRVEVNSRRNSLELQDEANRKSSAPYRAPELFEPTVDVALDGQSDVWSLGCVLYTMAFGTSPFEHPREGFMKLACLN 557          
The following BLAST results are available for this feature:
BLAST of EWM20725.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100577|gb|EWM20725.1|1.371e-148100.00serine threonine kinase isoform cra_a [Nannochloro... [more]
gi|585100576|gb|EWM20724.1|7.165e-14899.51serine threonine kinase isoform cra_a [Nannochloro... [more]
gi|1173953590|gb|OQS01122.1|5.410e-4947.26protein kinase [Achlya hypogyna][more]
gi|813178002|ref|XP_012205470.1|4.133e-4846.27NAK/MPSK protein kinase [Saprolegnia parasitica CB... [more]
gi|669158800|ref|XP_008614962.1|2.184e-4745.27NAK/MPSK protein kinase [Saprolegnia diclina VS20]... [more]
gi|301117892|ref|XP_002906674.1|2.038e-4642.79protein kinase [Phytophthora infestans T30-4] >gi|... [more]
gi|566020873|gb|ETI43784.1|1.877e-4542.79NAK/MPSK protein kinase [Phytophthora parasitica P... [more]
gi|570981184|gb|ETP41658.1|1.997e-4542.79NAK/MPSK protein kinase [Phytophthora parasitica P... [more]
gi|567958257|gb|ETK83849.1|2.017e-4542.79NAK/MPSK protein kinase [Phytophthora parasitica][more]
gi|568016226|gb|ETL90403.1|2.059e-4542.79NAK/MPSK protein kinase [Phytophthora parasitica] ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9980rna9980Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications