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Properties
| Property Name | Value |
|---|
| Product | serine threonine kinase isoform cra_a |
| Orig transcript id | gnl|cribi|Naga_100970g2.10375.mrna |
| Orig protein id | gnl|cribi|Naga_100970g2.10375 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 2; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037259.1 | supercontig | KK037259.1:40739..43425 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9980 ID=rna9980|Name=rna9980|organism=Nannochloropsis gaditana|type=mRNA|length=1307bp
TCTACCTGGTCAGAGACGAGGCCTCAGGTCAGACCTTGGCGCTGAAGCGC
ATGCTCTGCTTTCACGAGGAGGCAGTTCGGGACGCCGCCAACGAGCTCAA
GGTCCTCCGTGCTGTTCAGCACCCCTCCCTCCTTCCCCTCCTCGATTCCC
TCGCCACTCGCAGCAGCAAGGGGGGCCACACCTGTCGGGAGATGGCTTTC
CTCTTTCCCTTTTGCCGACGAGGCTCTTTGACGGACGCCATCGACAGAGC
CAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCCTTCGAACCTTCTTTG
GCATCTGTCAAGGCCTCCTCGCCCTTCACGAACACGACATTGCCCACTGG
GACATCAAGCCGCACAACGTGCTCCTCTCTGATCAAGGCCAGCCCCTCCT
CATGGACTTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGACCGAAC
GCCGAGCCGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCTCTCCC
GCTTACCGACCTCCAGAGCTCACGCAAGTCCTCCCCAACGTGCCCGTCGA
CTCCCGCGTGGACGTCTGGGCCATGGGCTGTCTCCTTTACTGCCTCGCGT
ACGGTCGCTCGCCCTTCGAGTCTCCCACCGAGGGAGTCCTCAGGCTGGGC
ATCCTCAATGGCCGCTACTCGTTTCCACCTCGCAACGCGCCTCCCCTCCC
CTTCCCTCCCTCCTCCTCCTCCTCTTCCTCCTCTTTTTCTCCCGCCTTCA
ACCAACTCATCACCTTTTGTCTGAATCCCAACCCCTCCCTCCGCCCCTCC
CTTTCCGATGTGATGAAAGAGGCCCAGGCGCTGGTCGCTTCCCCCTCCTT
CTAGAGCCTCCTCCCTTCCCTCCCTGCCTCTCTCCTCCATTCCCGTCACG
CTATCCCAGGTTCGGGGGGGTGAAGGAAAAGCTCCTCATGAGCAAATATT
GGTAAATCAAAGAAATATACACGTAAACATAAGTGCGCCTCGGATCCTTC
CCGTGAAACGCGTACACGGATGGGGGAAGGGGGGGGGTTGCTGAGGGAAG
GGCAATAACGGCACAGAGAAGACGAGGAAAATTCAGGCGTTTGTCTGTCG
AAATAGAACAGCTTCCGTTCTTCCATCGTAACAAAGGATGAGACTTTGAT
TGAAAAAGGCTGCCGTCTCCCACGCCCCGTCCCTCATCCTTGCATGAAGA
CAAGGTATCAAATCTTTGTACGAAGGACGTATGTATTATTTACCCATATT
TTAACTTCTTTTTTTACATGTGCTCAAAAGGATTTTGGGTTTGACAGCAT
AAAAATC back to topprotein sequence of rna9980 >rna9980-protein ID=rna9980-protein|Name=rna9980|organism=Nannochloropsis gaditana|type=polypeptide|length=203bp
MLCFHEEAVRDAANELKVLRAVQHPSLLPLLDSLATRSSKGGHTCREMAF
LFPFCRRGSLTDAIDRANTKWPFTEREVLRTFFGICQGLLALHEHDIAHW
DIKPHNVLLSDQGQPLLMDFGSCCSPATQTVTERRAALLLEEQAAAKCSP
AYRPPELTQVLPNVPVDSRVDVWAMGCLLYCLAYGRSPFESPTEGVLRLG
ILK back to topmRNA from alignment at KK037259.1:40739..43425- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9980 ID=rna9980|Name=rna9980|organism=Nannochloropsis gaditana|type=mRNA|length=2687bp|location=Sequence derived from alignment at KK037259.1:40739..43425- (Nannochloropsis gaditana)
TCTACCTGGTCAGAGACGAGGCCTCAGGTCAGACCTTGGCGCTGAAGCGC
ATGCTCTGCTTTCACGAGGAGGCAGTTCGGGACGCCGCCAACGAGCTCAA
GGTGCGGCCCCTCCCTCGCTCCTTCCCGCCCTCCTTCCCGCCCTCCCTCC
CTTCCGCCCTCTCTTCCCTTCTTCTTCACCTTTACTTTATTCACCCTCAC
AACGTCTTCCCCCCGTCTGCAGGTCCTCCGTGCTGTTCAGCACCCCTCCC
TCCTTCCCCTCCTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGGGCCAC
ACCTGTCGGGAGATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGCTCTTT
GACGGACGCCATCGACAGGTACCCTCCTTTCCCCCTCCCCTCTCTCCCTC
TTCCTCTTCCTCTTCCTCTTCCTCTTCCCCTCCCTCCCTCCCTCTCTTCC
TTCTTTAAGAGCGCCCGGCCGCTCCCTTCTCCCTGGAGGCCCTTCCCCAC
CCACTCATTCCACGGACGGATCATGTCCGCCATCTCCTTCCCGCCCTCCC
CTCACGCCTAGAGCCAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCCT
TCGAACCTTCTTTGGCATCTGTCAAGGTAATGCTACCGCGTCGTGCCCTC
CCTCCCTCCCTCCCCCACGGGCTTCGAATCCTTTACTGCCTGTTGCTAAT
CCCTTCTCTTCCCTCTCTCCTTTTGCTTCTCTCATGCACTTATCCTGTAC
ATCCTCAGACTATACTTGTCTGCCTTTGCCCTCTTCCTTCCTCCTCGATT
CCTAAACACAATCCTCCCCCCCGCCTCCCTCCCCACCTTCTTCCTCCCTC
TGTCGCTCTCTCTCCAGGTTGCCTCGCTCAGTCTCCCTCCCTCCTCCCTC
TCTTCCTCCCCCTTCCCTCCCTCCCTGTCTAGGCCTCCTCGCCCTTCACG
AACACGACATTGCCCACTGGGACATCAAGCCGCACAACGTGCTCCTCTCT
GATCAAGGCCAGGTACACCCTCCCTCCCTTCCTCTCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCCCACCTCCTACTCGTCGCCCACCACGGGCTGAAATG
ACGCACCATGGGAGGCAGAAGTTAAACTCTCAGAGCTGACAGTGCGTTTA
GTGAGGACGTGGATGTTGTGCCTCCCCGTCATACGTCGAAGCGCCCCGCT
TCCAATGCAATCGAATGCCACTCGCGACGCGTGTGGCCTCGGTGTCCCCA
AGGACGATCGCTTCTTTTCGACCTCATGGATCCACCCTCCTTCCTTTTTA
CGATCCTCCCTTCCACCTATCCCATCCGCCCCCGCTCCCTCCGTCTCCCC
CCTTCCCAACCTCCCTTCCTCCCTTCTCTTTCTCTCCAGCCCCTCCTCAT
GGACTTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGACCGAACGCC
GAGCCGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCTCTCCCGCT
TACCGACCTCCAGAGCTCACGCAAGTAGGAAAGAAACCTCCTTCATTTCC
TCCTCTTTCTCCTCCCCTCCTTCCTTTCCCTCTTCTGGCAGAGATCAACG
ATCGAGCCTCTTTTCACGTGTCTTGGCCCAAGGAAAGCAACCTGGCTGGC
TCACTCCTCTTCCCTCCCTCCCTCCATTCCTCGCTCCCTTCCCAGGTCCT
CCCCAACGTGCCCGTCGACTCCCGCGTGGACGTCTGGGCCATGGGCTGTC
TCCTTTACTGCCTCGCGTACGGTCGCTCGCCCTTCGAGTCTCCCACCGAG
GGAGTCCTCAGGCTGGGCATCCTCAAGTAACCCCTTCCTCCCTCCCTCCC
TCCATCCCTCCCCTTCTCCCCCCCATCCTTGGACCTGGCAGCACTACCCT
ATCTCTGAGCCCTTGCGTCCCTGAAGTCTCTACCCCTCTTCCCCTCTTCC
CTCCCTTTCTTCGTTCCTCTTCCTTCCTTGTCAACCCTCTCTTCCCTCCC
TTTCTCCGTCCCTCCTTCTTCCTCTTCAACCCTCGCAGTGGCCGCTACTC
GTTTCCACCTCGCAACGCGCCTCCCCTCCCCTTCCCTCCCTCCTCCTCCT
CCTCTTCCTCCTCTTTTTCTCCCGCCTTCAACCAACTCATCACCTTTTGT
CTGAATCCCAACCCCTCCCTCCGCCCCTCCCTTTCCGATGTGATGAAAGA
GGCCCAGGCGCTGGTCGCTTCCCCCTCCTTCTAGAGCCTCCTCCCTTCCC
TCCCTGCCTCTCTCCTCCATTCCCGTCACGCTATCCCAGGTTCGGGGGGG
TGAAGGAAAAGCTCCTCATGAGCAAATATTGGTAAATCAAAGAAATATAC
ACGTAAACATAAGTGCGCCTCGGATCCTTCCCGTGAAACGCGTACACGGA
TGGGGGAAGGGGGGGGGTTGCTGAGGGAAGGGCAATAACGGCACAGAGAA
GACGAGGAAAATTCAGGCGTTTGTCTGTCGAAATAGAACAGCTTCCGTTC
TTCCATCGTAACAAAGGATGAGACTTTGATTGAAAAAGGCTGCCGTCTCC
CACGCCCCGTCCCTCATCCTTGCATGAAGACAAGGTATCAAATCTTTGTA
CGAAGGACGTATGTATTATTTACCCATATTTTAACTTCTTTTTTTACATG
TGCTCAAAAGGATTTTGGGTTTGACAGCATAAAAATC back to topCoding sequence (CDS) from alignment at KK037259.1:40739..43425- >rna9980 ID=rna9980|Name=rna9980|organism=Nannochloropsis gaditana|type=CDS|length=3672bp|location=Sequence derived from alignment at KK037259.1:40739..43425- (Nannochloropsis gaditana)
GTCCTCCCCAACGTGCCCGTCGACTCCCGCGTGGACGTCTGGGCCATGGG
CTGTCTCCTTTACTGCCTCGCGTACGGTCGCTCGCCCTTCGAGTCTCCCA
CCGAGGGAGTCCTCAGGCTGGGCATCCTCAAGTAACCCCTCCTCATGGAC
TTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGACCGAACGCCGAGC
CGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCTCTCCCGCTTACC
GACCTCCAGAGCTCACGCAAGCCTCCTCGCCCTTCACGAACACGACATTG
CCCACTGGGACATCAAGCCGCACAACGTGCTCCTCTCTGATCAAGGCCAG
AGCCAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCCTTCGAACCTTCT
TTGGCATCTGTCAAGGTCCTCCGTGCTGTTCAGCACCCCTCCCTCCTTCC
CCTCCTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGGGCCACACCTGTC
GGGAGATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGCTCTTTGACGGAC
GCCATCGACAGATGCTCTGCTTTCACGAGGAGGCAGTTCGGGACGCCGCC
AACGAGCTCAAGGTCCTCCCCAACGTGCCCGTCGACTCCCGCGTGGACGT
CTGGGCCATGGGCTGTCTCCTTTACTGCCTCGCGTACGGTCGCTCGCCCT
TCGAGTCTCCCACCGAGGGAGTCCTCAGGCTGGGCATCCTCAAGTAACCC
CTCCTCATGGACTTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGAC
CGAACGCCGAGCCGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCT
CTCCCGCTTACCGACCTCCAGAGCTCACGCAAGCCTCCTCGCCCTTCACG
AACACGACATTGCCCACTGGGACATCAAGCCGCACAACGTGCTCCTCTCT
GATCAAGGCCAGAGCCAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCC
TTCGAACCTTCTTTGGCATCTGTCAAGGTCCTCCGTGCTGTTCAGCACCC
CTCCCTCCTTCCCCTCCTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGG
GCCACACCTGTCGGGAGATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGC
TCTTTGACGGACGCCATCGACAGATGCTCTGCTTTCACGAGGAGGCAGTT
CGGGACGCCGCCAACGAGCTCAAGGTCCTCCCCAACGTGCCCGTCGACTC
CCGCGTGGACGTCTGGGCCATGGGCTGTCTCCTTTACTGCCTCGCGTACG
GTCGCTCGCCCTTCGAGTCTCCCACCGAGGGAGTCCTCAGGCTGGGCATC
CTCAAGTAACCCCTCCTCATGGACTTCGGCTCCTGCTGCTCTCCCGCCAC
CCAAACTGTGACCGAACGCCGAGCCGCCCTCCTGCTCGAAGAACAAGCCG
CAGCAAAGTGCTCTCCCGCTTACCGACCTCCAGAGCTCACGCAAGCCTCC
TCGCCCTTCACGAACACGACATTGCCCACTGGGACATCAAGCCGCACAAC
GTGCTCCTCTCTGATCAAGGCCAGAGCCAACACCAAGTGGCCCTTCACGG
AGCGCGAGGTCCTTCGAACCTTCTTTGGCATCTGTCAAGGTCCTCCGTGC
TGTTCAGCACCCCTCCCTCCTTCCCCTCCTCGATTCCCTCGCCACTCGCA
GCAGCAAGGGGGGCCACACCTGTCGGGAGATGGCTTTCCTCTTTCCCTTT
TGCCGACGAGGCTCTTTGACGGACGCCATCGACAGATGCTCTGCTTTCAC
GAGGAGGCAGTTCGGGACGCCGCCAACGAGCTCAAGGTCCTCCCCAACGT
GCCCGTCGACTCCCGCGTGGACGTCTGGGCCATGGGCTGTCTCCTTTACT
GCCTCGCGTACGGTCGCTCGCCCTTCGAGTCTCCCACCGAGGGAGTCCTC
AGGCTGGGCATCCTCAAGTAACCCCTCCTCATGGACTTCGGCTCCTGCTG
CTCTCCCGCCACCCAAACTGTGACCGAACGCCGAGCCGCCCTCCTGCTCG
AAGAACAAGCCGCAGCAAAGTGCTCTCCCGCTTACCGACCTCCAGAGCTC
ACGCAAGCCTCCTCGCCCTTCACGAACACGACATTGCCCACTGGGACATC
AAGCCGCACAACGTGCTCCTCTCTGATCAAGGCCAGAGCCAACACCAAGT
GGCCCTTCACGGAGCGCGAGGTCCTTCGAACCTTCTTTGGCATCTGTCAA
GGTCCTCCGTGCTGTTCAGCACCCCTCCCTCCTTCCCCTCCTCGATTCCC
TCGCCACTCGCAGCAGCAAGGGGGGCCACACCTGTCGGGAGATGGCTTTC
CTCTTTCCCTTTTGCCGACGAGGCTCTTTGACGGACGCCATCGACAGATG
CTCTGCTTTCACGAGGAGGCAGTTCGGGACGCCGCCAACGAGCTCAAGGT
CCTCCCCAACGTGCCCGTCGACTCCCGCGTGGACGTCTGGGCCATGGGCT
GTCTCCTTTACTGCCTCGCGTACGGTCGCTCGCCCTTCGAGTCTCCCACC
GAGGGAGTCCTCAGGCTGGGCATCCTCAAGTAACCCCTCCTCATGGACTT
CGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGACCGAACGCCGAGCCG
CCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCTCTCCCGCTTACCGA
CCTCCAGAGCTCACGCAAGCCTCCTCGCCCTTCACGAACACGACATTGCC
CACTGGGACATCAAGCCGCACAACGTGCTCCTCTCTGATCAAGGCCAGAG
CCAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCCTTCGAACCTTCTTT
GGCATCTGTCAAGGTCCTCCGTGCTGTTCAGCACCCCTCCCTCCTTCCCC
TCCTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGGGCCACACCTGTCGG
GAGATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGCTCTTTGACGGACGC
CATCGACAGATGCTCTGCTTTCACGAGGAGGCAGTTCGGGACGCCGCCAA
CGAGCTCAAGGTCCTCCCCAACGTGCCCGTCGACTCCCGCGTGGACGTCT
GGGCCATGGGCTGTCTCCTTTACTGCCTCGCGTACGGTCGCTCGCCCTTC
GAGTCTCCCACCGAGGGAGTCCTCAGGCTGGGCATCCTCAAGTAACCCCT
CCTCATGGACTTCGGCTCCTGCTGCTCTCCCGCCACCCAAACTGTGACCG
AACGCCGAGCCGCCCTCCTGCTCGAAGAACAAGCCGCAGCAAAGTGCTCT
CCCGCTTACCGACCTCCAGAGCTCACGCAAGCCTCCTCGCCCTTCACGAA
CACGACATTGCCCACTGGGACATCAAGCCGCACAACGTGCTCCTCTCTGA
TCAAGGCCAGAGCCAACACCAAGTGGCCCTTCACGGAGCGCGAGGTCCTT
CGAACCTTCTTTGGCATCTGTCAAGGTCCTCCGTGCTGTTCAGCACCCCT
CCCTCCTTCCCCTCCTCGATTCCCTCGCCACTCGCAGCAGCAAGGGGGGC
CACACCTGTCGGGAGATGGCTTTCCTCTTTCCCTTTTGCCGACGAGGCTC
TTTGACGGACGCCATCGACAGATGCTCTGCTTTCACGAGGAGGCAGTTCG
GGACGCCGCCAACGAGCTCAAG back to top
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