EWM20726.1, cds9947 (CDS) Nannochloropsis gaditana

Overview
NameEWM20726.1
Unique Namecds9947
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:39566..39880 +

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Properties
Property NameValue
Protein idEWM20726.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100970g1.10376.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:39566..39880 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM20726.1 vs. NCBI_GenBank
Match: gi|585100578|gb|EWM20726.1| (hypothetical protein Naga_100970g1 [Nannochloropsis gaditana])

HSP 1 Score: 174.481 bits (441), Expect = 1.017e-54
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
Query:    1 MVLVTPTTATSVHAITAVTPTTVTSVRAVRAVTQTTITSVRAVTAVTQTTVTSVRAVTAVAQTTATSVRAVTAVSMTRVTGPMAPTIVRGTSSRVAASIAVKPL 104
            MVLVTPTTATSVHAITAVTPTTVTSVRAVRAVTQTTITSVRAVTAVTQTTVTSVRAVTAVAQTTATSVRAVTAVSMTRVTGPMAPTIVRGTSSRVAASIAVKPL
Sbjct:    1 MVLVTPTTATSVHAITAVTPTTVTSVRAVRAVTQTTITSVRAVTAVTQTTVTSVRAVTAVAQTTATSVRAVTAVSMTRVTGPMAPTIVRGTSSRVAASIAVKPL 104          
BLAST of EWM20726.1 vs. NCBI_GenBank
Match: gi|553194227|ref|XP_005855913.1| (hypothetical protein NGA_0556700, partial [Nannochloropsis gaditana CCMP526] >gi|422293157|gb|EKU20457.1| hypothetical protein NGA_0556700, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 51.2174 bits (121), Expect = 8.578e-7
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query:    1 MVLVTPTTATSVHAITAVTPTTVTSVRAV 29
            MVLVTPTTATSVHAITAVTPTTVTSVRAV
Sbjct:    1 MVLVTPTTATSVHAITAVTPTTVTSVRAV 29          
The following BLAST results are available for this feature:
BLAST of EWM20726.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585100578|gb|EWM20726.1|1.017e-54100.00hypothetical protein Naga_100970g1 [Nannochloropsi... [more]
gi|553194227|ref|XP_005855913.1|8.578e-7100.00hypothetical protein NGA_0556700, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9978rna9978Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications