EWM20764.1, cds9908 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20764.1 vs. NCBI_GenBank
Match: gi|585100640|gb|EWM20764.1| (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 401.364 bits (1030), Expect = 1.301e-141 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0 Query: 1 MQSLRIASVAGLLLSMACAPVSAEVPGGALRGGNSTTRSLAPQCLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGLNKRPMGDILDFVKTKFNVIRVPFSVKFALSDPLTKRPDRYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQHDIVGEKAELWYEVRRAGEGRGKTFSIEGNRDNLG 195 MQSLRIASVAGLLLSMACAPVSAEVPGGALRGGNSTTRSLAPQCLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGLNKRPMGDILDFVKTKFNVIRVPFSVKFALSDPLTKRPDRYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQHDIVGEKAELWYEVRRAGEGRGKTFSIEGNRDNLG Sbjct: 1 MQSLRIASVAGLLLSMACAPVSAEVPGGALRGGNSTTRSLAPQCLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGLNKRPMGDILDFVKTKFNVIRVPFSVKFALSDPLTKRPDRYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQHDIVGEKAELWYEVRRAGEGRGKTFSIEGNRDNLG 195
BLAST of EWM20764.1 vs. NCBI_GenBank
Match: gi|585108749|gb|EWM26661.1| (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 93.5893 bits (231), Expect = 6.531e-19 Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 0 Query: 44 CLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGLNKRPMGDILD-FVKTKFNVIRVPFSVKFALSDPLTKRPDRYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQHDIVGEKA-ELWYE 173 C L W+S +G + N F +KGISWFG E GLN + IL+ F++ KFN +R+P SV F L+ P +P++ VG GL+ KT +EILD + + RG+ +MLD H + ++A +LWY+ Sbjct: 69 CFDSFDLAWSSGKDGQIYANTAPFFVKGISWFGCEGHGYTFTGLNFTTVDTILNFFLQHKFNTVRIPVSVAFGLA-PKDFKPNQRFVGKGLKGKTIWEILDEVIDQAALRGLMVMLDMHTLGPQEATDLWYD 199
BLAST of EWM20764.1 vs. NCBI_GenBank
Match: gi|585100881|gb|EWM20925.1| (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 88.9669 bits (219), Expect = 2.726e-17 Identity = 55/134 (41.04%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 47 KDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGLN---KRPMGDILDFVKTK-FNVIRVPFSVKFALS-DPLTKRPDRYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQHDIVGEK--AELWYE 173 K L WTS VL+N F IKGI+WFG E ++ +HGL + + D LD + FN IR+PFSVK AL+ D P L TS +I+D V E GKRG+ +MLDQH + ++ ++LWY+ Sbjct: 13 KGPLTWTSE-RRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYD 145
BLAST of EWM20764.1 vs. NCBI_GenBank
Match: gi|802747061|gb|KKA75130.1| (hypothetical protein PRIPAC_4513 [Pristionchus pacificus]) HSP 1 Score: 85.5001 bits (210), Expect = 3.004e-17 Identity = 49/138 (35.51%), Postives = 78/138 (56.52%), Query Frame = 0 Query: 39 SLAPQCLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGLNKRPMGDILDFVK-TKFNVIRVPFSVKFALSDPLTKRPDRYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQHDIV--GEKAELWYE 173 +++ QC+ + L+WT++ G +L+NG +KGI++FG E HG+ + LDF+K FN IRVPFS++ ++P + GL K++ ++LD+F+ +RG IMLD H I G +ELWY Sbjct: 16 TMSQQCV--NQLQWTTA-GGNILVNGQPLVLKGINYFGFETETYTPHGIWSYDLNVYLDFIKNNNFNAIRVPFSLEMVKNNP-SNLNINCATNPGLCGKSALQLLDVFIDRAAERGFLIMLDNHRITPGGGISELWYN 149
BLAST of EWM20764.1 vs. NCBI_GenBank
Match: gi|66826505|ref|XP_646607.1| (hypothetical protein DDB_G0270190 [Dictyostelium discoideum AX4] >gi|60474508|gb|EAL72445.1| hypothetical protein DDB_G0270190 [Dictyostelium discoideum AX4]) HSP 1 Score: 87.8113 bits (216), Expect = 8.015e-17 Identity = 53/138 (38.41%), Postives = 74/138 (53.62%), Query Frame = 0 Query: 43 QCLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGLNKRPMGDILD-FVKTKFNVIRVPFSVKFALSDPLTKRPDR--YIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQH--DIVGEKAELWYEVR 175 QC KD L W S + + LNG I+GI+WFG+E G GL + + ILD V T FN +R+PFSV ++ + P+ Y + L+ KT+ E+L +E GKRGI I+L+QH D + LWY Sbjct: 26 QCWNKDNLSWRSGGDRKLTLNGVEITIQGIAWFGMETGTFSPGGLQSQSVESILDILVATGFNALRLPFSVDMLINK---RYPNHINYSLNPNLQGKTALEVLQYITSESGKRGILIVLEQHRFDPADYISPLWYTTE 160
BLAST of EWM20764.1 vs. NCBI_GenBank
Match: gi|585109023|gb|EWM26893.1| (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 83.9593 bits (206), Expect = 1.335e-15 Identity = 65/192 (33.85%), Postives = 90/192 (46.88%), Query Frame = 0 Query: 4 LRIASVAGLLLSMACAPVSAEVPGGALRGGNSTT---RSLA----------PQCLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGE-EMLHGLNKRPMGDILDF-VKTKFNVIRVPFSVKFALSDPLTKRPDRYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQHDIVGEK-AELWYEVRRAGE 179 +R+A+ L L +P + NS T R LA P L K+ L WT + N + +NG FH+KG+SWFG+E G+ ML GLN R + +IL F V FN IRVPFS K+AL R Y + + + L+ F+ I +MLD H + ++ ELWY E Sbjct: 8 MRLATQGVLALLPTSSPEGSITDASLASATNSVTPLLRGLAYPSFTKAMHGPIDLGKEELTWTGT-NKELRVNGKTFHLKGLSWFGLEVGDSNMLLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVR--GYFRDGDINQLSRRQFLNKFIERAADFKILVMLDSHRLNDQEIPELWYSQEYTQE 196
BLAST of EWM20764.1 vs. NCBI_GenBank
Match: gi|585108543|gb|EWM26490.1| (cellulase 2 [Nannochloropsis gaditana]) HSP 1 Score: 83.9593 bits (206), Expect = 1.505e-15 Identity = 67/213 (31.46%), Postives = 102/213 (47.89%), Query Frame = 0 Query: 1 MQSLRIASVAGLLLSMACAPVSAEVPGGALRGGNS---TTRSLA----------PQCLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGLNKRPMGDILDFVKTK-FNVIRVPFSVKFALSDPLTKRPDRYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQHDIVGE-KAELWYEVRRA----GEGRGKTFSIEGNRDNL 194 M ++ V LLL+ + + +A+ G L N TR LA P L +L+WTS G +LLNG FH+KG+S+FG E E+ HGL I F++ + FN +R+PFS AL K+ + + L D T+ E++ + + + GI IMLD H + + ELWY+ + + E + G+R NL Sbjct: 7 MDAISSVIVTFLLLTASPSFSNADDTMGGLVNMNPRLRATRQLAKASGSSKVSTPADLCVASLDWTSE-GGEILLNGQPFHLKGVSYFGFETPNEVPHGLWSVTRDQIFGFLRNESFNAVRLPFSTALALEP--NKKVNANTIEKELHDLTALELIGNIIDKAAEYGILIMLDMHRLNEDFIPELWYDDKYSMDDVKEAWDNLLTAFGDRWNL 216
BLAST of EWM20764.1 vs. NCBI_GenBank
Match: gi|470501173|ref|XP_004347125.1| (cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440800708|gb|ELR21743.1| cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 83.5741 bits (205), Expect = 2.769e-15 Identity = 53/152 (34.87%), Postives = 77/152 (50.66%), Query Frame = 0 Query: 29 ALRGGNSTTRSLAPQCLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGL-NKRPMGDILDFVKT-KFNVIRVPFSVKFALSDPLTKRPD--RYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQHDIVGE---KAELWYE 173 AL ST +S C L +TS+ GA+ LNG F +KG SWFG E G +++HGL R ++LDF+ T FN IR+PF + L+D +P Y L+ +S +++D V RG+ IM D H + + + WY Sbjct: 26 ALMSQTSTAQSAT--CYAPSALNFTSA-QGALWLNGQPFKLKGTSWFGFETGNKVVHGLWTSRSYLNLLDFLATNNFNAIRIPFYLDLVLND---AQPSSINYGANPDLQGLSSMQVMDKVVQAAAARGLLIMFDLHSFLPDTNIQDNTWYN 171
BLAST of EWM20764.1 vs. NCBI_GenBank
Match: gi|470261800|ref|XP_004360506.1| (putative cellulase [Dictyostelium fasciculatum] >gi|328874289|gb|EGG22655.1| putative cellulase [Dictyostelium fasciculatum]) HSP 1 Score: 83.5741 bits (205), Expect = 2.964e-15 Identity = 48/140 (34.29%), Postives = 76/140 (54.29%), Query Frame = 0 Query: 36 TTRSLAPQCLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGLNKRPMGDILD-FVKTKFNVIRVPFSVKFALSDPLTKRPDRYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQH--DIVGEKAELWY 172 +T +LA C D+L+W +S ++LNG ++GI+WFG+E GL + + +LD V FN +R+PFS+ L+D + + Y + GL+ KT+ ++LD VA RGI + +QH D +LWY Sbjct: 18 STIALADTCFNIDSLQWRTS-GSKMMLNGVEIRVQGIAWFGLETDSFSPGGLQQTSVEALLDILVNQNFNALRLPFSIDMILNDRWPSKIN-YGLNPGLQGKTALQVLDYIVAASAARGILAIPEQHRFDASAYIPDLWY 155
BLAST of EWM20764.1 vs. NCBI_GenBank
Match: gi|470422180|ref|XP_004337474.1| (cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440794295|gb|ELR15461.1| cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 79.7221 bits (195), Expect = 4.615e-14 Identity = 48/137 (35.04%), Postives = 63/137 (45.99%), Query Frame = 0 Query: 41 APQCLYKDTLEWTSSPNGAVLLNGNAFHIKGISWFGIEKGEEMLHGLNKRPMGDILDFVKTK-FNVIRVPFSVKFALSDPLTKRPDRYIVGFGLEDKTSFEILDIFVAECGKRGIFIMLDQHDIVGEKAE---LWYE 173 A C L +TS G + +NGN IKG SWFG E HGL + LDF+ FN IR+PF + A++D D Y L+ TS +++D + RGI IMLD H + LWY Sbjct: 22 ADACFATTALNFTSE-QGGLWVNGNRLRIKGASWFGFETSINAPHGLWSKSYTFFLDFLADNGFNAIRLPFHLALAINDATPGSID-YSANSDLQGLTSLQVMDKIIQAAADRGILIMLDLHSFTADSYASDGLWYN 156 The following BLAST results are available for this feature:
BLAST of EWM20764.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10 Position : 0 Zoom : x 1
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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