EWM20769.1, cds9902 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|585100648|gb|EWM20769.1| (hypoxia up-regulated 1 [Nannochloropsis gaditana]) HSP 1 Score: 1181.39 bits (3055), Expect = 0.000e+0 Identity = 582/582 (100.00%), Postives = 582/582 (100.00%), Query Frame = 0
Query: 1 MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEKVGPLPRPARALCQSMLFLVPLLTPLSSSFALASLAHAPRSPTSAASFLPSLPFFLDPSSA 582
MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEKVGPLPRPARALCQSMLFLVPLLTPLSSSFALASLAHAPRSPTSAASFLPSLPFFLDPSSA
Sbjct: 1 MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEKVGPLPRPARALCQSMLFLVPLLTPLSSSFALASLAHAPRSPTSAASFLPSLPFFLDPSSA 582
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|585100647|gb|EWM20768.1| (hypoxia up-regulated 1 [Nannochloropsis gaditana]) HSP 1 Score: 1059.67 bits (2739), Expect = 0.000e+0 Identity = 522/522 (100.00%), Postives = 522/522 (100.00%), Query Frame = 0
Query: 1 MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK 522
MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK
Sbjct: 1 MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK 522
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|1072227524|gb|OEU12263.1| (HSP70-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 257.684 bits (657), Expect = 1.004e-71 Identity = 171/513 (33.33%), Postives = 252/513 (49.12%), Query Frame = 0
Query: 10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK 522
+HDD+ LS H SR Q EELC DL +RA P+ L AN+TL++I A+E+IGGG+RVPKVQ + LG +EL MH+N DE+MA GA+FY ANIST+F+VR +G+ DI PF VG LE+ +EEK G E E A W ++ATIF K+ +TI+F +D+ ++L Y P GA+ + + + GVS +E K PKV L FEL S L+KAEA ++E E T A + +E + E E E AE + D K D K HRK L V +Y G +++P +++ E K +A L D+ + +A+N LE+Y Y VKNK+++ EE ++ +ST+EQR + ++W++DEG + + + ++ A ++ R E AR AA++A + + E+ W + +TEEEK
Sbjct: 342 LHDDLSLSMHFSRTQFEELCDDLTKRATDPIIDALASANVTLEEITAIELIGGGMRVPKVQSSLSTVLGDMELGMHINSDESMALGASFYGANISTAFRVRQVGLVDISPFAVGVTLEDLETDEEKKSG--------------EDEDA---WGKKATIFKANGKIGVKKTIAFTHDQDVHVSLDYSDPEKLPIGAKAELQRYKVSGVSAFAKEMEEKGLGKPKVSLQFELSQSGTTALIKAEAAVEETYTVEVEVEIDDEET-------------------------------AASFNETNEKETENKTEGSAESQND---TSKEDISEKEEEPKKKKTKLVNQEKKK-THRKSLDVEIYYVG-KIQPLSKDLIEEYKLNIAELALLDKGRILLEEAKNKLESYFYSVKNKLIDDEENVAKISTEEQREELRKLSMEAEEWLFDEGDTADVETIQSKYDELATPAEMVWFRLKEMT--ARPAAVKALNERLVEIEEKFTNWVTNLTHITEEEK 799
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|1210521493|dbj|GAX19483.1| (hypoxia up-regulated 1 [Fistulifera solaris]) HSP 1 Score: 219.164 bits (557), Expect = 5.634e-58 Identity = 163/519 (31.41%), Postives = 254/519 (48.94%), Query Frame = 0
Query: 10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTY----EASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEA--EEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK 522
+H+D L H++RA+LE L A L +RAVQP L++AN T+ D+ AVE+IGGG+RVP +Q ++ LG EL +H+N DE+MA GAAF AN ST+F+VR IG+ D+ PF L + P+ KK +E W+++ T+F KL +TI+F D L Y E L P G + ++ + I G+++ + K + PKV L FEL AS + HLVKAEA ++E + E + V A+NA + +E K+AE E K E K + K + ++ L VT+ +G +++P T E E+S+ KLAAL D+L+ + + RN LE+Y+Y++KN + + E + V+T+EQ + A +WM D+G + + +++ T V I R E AR AA+ A K + ++ L++ W+ + P +TE E+
Sbjct: 339 LHNDAPLQQHMTRAELETLAAPLIQRAVQPALDCLKRANKTIADLTAVELIGGGMRVPAIQSGLQAALGVEELGLHMNSDESMALGAAFAGANHSTAFRVRHIGLVDVCPFAYQVTLTDLNPD---------------KKADE--------WKKQTTMFKSFGKLGIKKTITFTHEADCLCQLDYAEDAEHVGLLPEGTERSLVEYSITGIADFATKMKEKGA--PKVSLQFELTASGIAHLVKAEASVEE-TYMAQEEIEVDDEEAATEEEAAEPAKDK--------------AENAASGKDEASESTSENKDAEKADETDKKTEDDKNKEKSKDKKPKAKPKKRITVEKEKTRIIKETLTVTARNKG-KVQPLTPELMEASRAKLAALAEKDKLRILREETRNKLESYIYKIKNTIQDV-EGIKEVATEEQLQECMDLALAAQEWMDDDGYGADIASMEQKYTTVSDPFEKILFRYKEKE--ARPAAVAALQKQLTDIEKLMENWSTSKPQVTEAER 813
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|1210524770|dbj|GAX16478.1| (hypoxia up-regulated 1 [Fistulifera solaris]) HSP 1 Score: 216.083 bits (549), Expect = 7.300e-57 Identity = 160/527 (30.36%), Postives = 258/527 (48.96%), Query Frame = 0
Query: 10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASA----LFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPA----------PPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK 522
+H+D L H++RA+LE L A L +RAVQP LQ+AN T+ D+ AVE+IGGG+RVP +Q ++ LG EL +H+N DE+MA GAAF AN ST+F+VR IG+ D+ PF L++ P+ KK +E W+++ T+F KL +TI+F D L Y A L P G + ++ + I G+++ + K + PK+ L FEL AS + HLVKAEA ++E + E + V + P + E+D + A E KDA+ + D + + S P K + ++ L VT+ +G +++P + E E+S+ KLAAL D+L+ + + RN LE+Y+Y++KN ++ E + V+T++Q + A +WM D+G + + +++ T + I R E AR AA+ A K + ++ L++ W+ + P +TE E+
Sbjct: 339 LHNDAPLQQHMTRAELENLAAPLIQRAVQPALDCLQRANKTIADLTAVELIGGGMRVPAIQSGLQAALGLEELGLHMNSDESMALGAAFAGANHSTAFRVRHIGLVDVCPFAYQVTLKDLNPD---------------KKSDE--------WKKQTTMFKSFGKLGIKKTITFTHEADCLCQLDYSEDAEHVGLLPEGTERSLVEYSITGIADFATKMKDKGA--PKISLQFELTASGIAHLVKAEASVEE-TYMAQEEIEVDD-EEATTEEEAAEPAKDKA---------------------EDDAADKDEASASTSENKDADRADETDKKTDEEKSKEKSKDKKPKAKPKKRITVEKEKTRIIKETLTVTARNKG-KVQPLSPELLEASRAKLAALAEKDKLRILREETRNKLESYIYKIKN-TIQDVEGIKEVATEDQLQECMDLALAAQEWMDDDGYGADIATMEKKYTTLSDPFEKIMFRYKEKE--ARPAAVAALQKQLTDIEKLMENWSTSKPQVTEAER 813
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|923642451|ref|XP_013641724.1| (PREDICTED: heat shock 70 kDa protein 17-like [Brassica napus]) HSP 1 Score: 209.92 bits (533), Expect = 7.306e-55 Identity = 155/524 (29.58%), Postives = 252/524 (48.09%), Query Frame = 0
Query: 10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKV-RPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPG-AQPTIALFDIRGVSELVREHGTKT-SYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAP------PKPIVHRKILRVTSHYEGLRLRPGTEEEKES---SKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEE 521
+HDD D + +SR + EELC DL+ER++ PL VL+ + L + DI AVE+IGG RVPK+Q +++ +G +L HL+ DEA+ G+A +AAN+S K+ R +G++D P+G LE G KK+E +Q + KL S SF KD ++L YE+ + PPG P A + + G+++ ++ ++ S P K L F L S ++ L + +A ++ ++ VP ++ T + + APS+E E + +A+AE N+++SNTT P + + ++ RV + PG KES +K KL AL D+ +R A+ +N+LE+Y+Y K K+ E +ST E+R A + +++ DW+Y +G D A+ ++ER ++A+ PI LR E AR A+E A K + EV+ ++K W WL +E+
Sbjct: 325 LHDDRDFRSTISREKFEELCKDLWERSLTPLKDVLKHSGLKIDDIYAVELIGGATRVPKLQSTIQEFIGKQDLDKHLDADEAIVLGSALHAANLSDGIKLKRRLGISDGSPYGFLVELE-----------------GPNVKKDESTKQ---------QLVPRMKKLPSKMFRSFVLDKDFDVSLAYESEDILPPGITSPVFAQYSVSGLADATEKYSSRNLSAPIKANLHFSLSRSGILSLDRGDAVIE-----------ITEWVEVPKKNVTVDNNTTSTTGNA----------STGAPSDENLQENKEELQADAE-------------------NSSASNTTTEEPAVVDLGTEKKLKKRTFRVPLKVVEKTVGPGAPFTKESLAEAKIKLEALDKKDKERRRTAELKNNLESYIYATKEKL--ETPEFEKISTQEERKAFVEKLDEVQDWLYMDGEDANATEFQERLDSLKAIGSPISLRSDELT--ARPVAVEYAQKYLTEVKEIIKEWETNKTWLPKEK 778
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|923929884|ref|XP_013733730.1| (PREDICTED: heat shock 70 kDa protein 17 isoform X1 [Brassica napus]) HSP 1 Score: 206.068 bits (523), Expect = 6.767e-54 Identity = 155/524 (29.58%), Postives = 251/524 (47.90%), Query Frame = 0
Query: 10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKV-RPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPG-AQPTIALFDIRGVSELVREHGTKT-SYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAP------PKPIVHRKILRVTSHYEGLRLRPGTEEEKES---SKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEE 521
+HDD D + +SR + EELC DL+ER++ PL VL+ + L + DI AVE+IGG RVPK+Q +++ +G +L HL+ DEA+ G+A +AAN+S K+ R +G++D P+G LE G KK+E +Q + KL S SF KD ++L YE+ + PPG P A + + G+++ ++ ++ S P K L F L S ++ L + +A ++ ++ VP ++ T + + APS+E E + +A+AE N+++SNTT P + + ++ RV + PG KES +K KL AL D+ +R A+ +N+LE+Y+Y K K+ E VST E+R A + ++ DW+Y +G D A+ +++R ++A+ PI LR E AR A+E A K + EV+ ++K W WL +E+
Sbjct: 325 LHDDRDFRSTISREKFEELCKDLWERSLTPLKDVLKHSGLKIDDIYAVELIGGATRVPKLQSTIQEFIGKQDLDKHLDADEAIVLGSALHAANLSDGIKLKRRLGISDGSPYGFLVELE-----------------GPNVKKDESTKQ---------QLVPRMKKLPSKMFRSFVLDKDFDVSLAYESEDILPPGITSPVFAQYSVSGLADATEKYSSRNLSAPIKANLHFSLSRSGILSLDRGDAVIE-----------ITEWVEVPKKNVTVDNNTTSTTGNA----------STGAPSDENLQENKEELQADAE-------------------NSSASNTTTEEPAVVDLGTEKKLKKRTFRVPLKVVEKTVGPGAPFTKESLAEAKIKLEALDKKDRERRRTAELKNNLESYVYATKEKL--ETPEFEKVSTQEERKAFVEKLGEVQDWLYMDGEDANATEFQDRLDSLKAIGSPISLRSEELT--ARPVAVEYAQKYLTEVKEIIKEWETNKTWLPKEK 778
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|1079355617|ref|XP_009145637.2| (PREDICTED: heat shock 70 kDa protein 17 isoform X1 [Brassica rapa]) HSP 1 Score: 206.068 bits (523), Expect = 7.923e-54 Identity = 155/524 (29.58%), Postives = 250/524 (47.71%), Query Frame = 0
Query: 10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKV-RPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPG-AQPTIALFDIRGVSELVREHGTKT-SYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAP------PKPIVHRKILRVTSHYEGLRLRPGTEEEKES---SKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEE 521
+HDD D + +SR + EELC DL+ER++ PL VL+ + L + DI AVE+IGG RVPK+Q +++ +G +L HL+ DEA+ G+A +AAN+S K+ R +G+ D P+G LE G KK+E +Q + KL S SF KD ++L YE+ + PPG P A + + G+++ ++ ++ S P K L F L S ++ L + +A ++ ++ VP ++ T + + APS+E E + +A+AE N+++SNTT P + + ++ RV + PG KES +K KL AL D+ +R A+ +N+LE+Y+Y K K+ E VST E+R A + ++ DW+Y +G D A+ +++R ++A+ PI LR E AR A+E A K + EV+ ++K W WL +E+
Sbjct: 325 LHDDRDFRSTISREKFEELCKDLWERSLTPLKDVLKHSGLKIDDIYAVELIGGATRVPKLQSTIQEFIGKQDLDKHLDADEAIVLGSALHAANLSDGIKLKRRLGIIDGSPYGFLVELE-----------------GPNVKKDESTKQ---------QLVPRMKKLPSKMFRSFVLDKDFDVSLAYESEDILPPGITSPVFAQYSVSGLADATEKYSSRNLSAPIKANLHFSLSRSGILSLDRGDAVIE-----------ITEWVEVPKKNVTVDNNTTSTTGNA----------STGAPSDENLQENKEELQADAE-------------------NSSASNTTTEEPAVVDLGTEKKLKKRTFRVPLKVVEKTVGPGAPFTKESLAEAKIKLEALDKKDRERRRTAELKNNLESYVYATKGKL--ETPEFEKVSTQEERKAFVEKLGEVQDWLYMDGEDANATEFQDRLDSLKAIGSPISLRSEELT--ARPVAVEYAQKYLTEVKEIIKEWETNKTWLPKEK 778
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|923924476|ref|XP_013731308.1| (PREDICTED: heat shock 70 kDa protein 17-like [Brassica napus]) HSP 1 Score: 205.682 bits (522), Expect = 2.009e-53 Identity = 153/520 (29.42%), Postives = 247/520 (47.50%), Query Frame = 0
Query: 10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKV-RPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPG-AQPTIALFDIRGVSELVREHGTKT-SYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAP------PKPIVHRKILRVTSHYEGLRLRPG---TEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWL 517
+HDD D + +SR + EELC DL+ER++ PL VL+ + L + DI AVE+IGG RVPK+Q +++ +G +L HL+ DEA+ G+A YAAN+S K+ R +G+ D P+G LE G KK+E +Q + KL S SF KD ++L Y++ + PPG P A + + G + ++ ++ S P K L F L S ++ L + +A ++ ++ VP ++ T + + APS+E E + +A+AE N+++SNTT P + + ++ RV + PG T+E +++K KL AL D+ +R A+ +N+LE+Y+Y K K+ E VST E+R A + +++ DW+Y +G D A+ + +R ++A+ PI LR E AR A+E A K + EV+ ++K W WL
Sbjct: 325 LHDDRDFRSTISREKFEELCKDLWERSLTPLKDVLKHSGLKIDDIYAVELIGGATRVPKLQSTIQEFIGKQDLDKHLDADEAIVLGSALYAANLSDGIKLKRRLGIVDGSPYGFLVELE-----------------GPNVKKDESTKQ---------QLVPRMKKLPSKMFRSFVLDKDFDVSLAYDSEDILPPGITSPVFAQYSVSGFAVATEKYSSRNLSAPIKANLHFSLSRSGILSLDRGDAVIE-----------ITEWVEVPKKNVTVDNNTTSTTGNA----------STGAPSDENLHENKEELQADAE-------------------NSSASNTTTEEPAVVDLGTEKKLKKRTFRVPLKVVEKTVGPGAPFTKESLDAAKIKLEALDKKDRERRRTAELKNNLESYVYATKEKL--ETPEFEKVSTQEERKAFVEKLDEVQDWLYMDGEDANATEFLDRLDSLKAIGSPISLRSEELT--ARPVAVEYAQKYLTEVKEIIKEWETNKTWL 774
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|658013960|ref|XP_008342291.1| (PREDICTED: heat shock 70 kDa protein 17-like [Malus domestica]) HSP 1 Score: 205.682 bits (522), Expect = 2.210e-53 Identity = 156/519 (30.06%), Postives = 246/519 (47.40%), Query Frame = 0
Query: 10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKV-RPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGA-QPTIALFDIRGVSELVREHGTKT-SYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKI--------LRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWL 517
++DD D + ++R + EELC DL+E+++ PL VL+ + L + +I AVE+IGG RVPK+Q +++ LG EL HL+ DEA GAA YAAN+S K+ R +G+ D +G L+ G L +KE +T R T+ KL S SF SKD + L YE+ L PPGA P A + + ++E ++ ++ S P K L F L S ++ L +A+A ++ VS VP + +S P + A S+E +G + G GN+ SSN+T ++ +K+ L++ G + P E E +K+KL L D +R A+ +N+LE Y+Y +K K E +E VST E+R + + +++ +W+Y +G D AS ++ER ++A+ PIF R E AR A+E A K + EV+ +++ W PW+
Sbjct: 329 LYDDRDFRSTITREKFEELCEDLWEKSLXPLKEVLKHSGLKVDEIYAVELIGGATRVPKLQAKLQEYLGRKELDRHLDADEATVLGAALYAANLSDGIKLNRKLGMIDGSTYGFVLELD----------GPDL-----------QKEDST-----RQTLVQRMKKLPSKMFRSFIQSKDFEVTLAYESEDLLPPGATSPVFAQYSVSSLTETSEKYASRNLSSPIKASLHFSLSRSGVLSLDRADAFIE-----------VSEWVEVPKKNLTTQENSTNVAPN------ISTETGAQNTSKESNGNTDDG------------------------GNSNSSNSTVETD--VVIEKKLKKRTFRIPLKIVEKTVGPAMSPSKESLAE-AKRKLEELDKKDAERRRTAELKNTLEGYIYGIKEK-FETSKEYEKVSTSEERQSFIGKLDEVQEWLYTDGEDATASEFQERLDVLKAIGDPIFFRLKELT--ARPEAVEHARKYLVEVQQILRGWESNKPWV 774 The following BLAST results are available for this feature:
BLAST of EWM20769.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|