EWM20801.1, cds9872 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|585100700|gb|EWM20801.1| (prefoldin subunit [Nannochloropsis gaditana]) HSP 1 Score: 333.183 bits (853), Expect = 1.080e-115 Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0 Query: 1 MASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS 164 MASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS Sbjct: 1 MASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS 164
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|553177691|ref|XP_005852487.1| (prefoldin subunit 5 [Nannochloropsis gaditana CCMP526] >gi|422296045|gb|EKU23344.1| prefoldin subunit 5 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 268.47 bits (685), Expect = 3.765e-90 Identity = 135/150 (90.00%), Postives = 135/150 (90.00%), Query Frame = 0 Query: 30 ELETITRHYASLREAQSRLNGCRTSVNELAPTKN---------------GDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS 164 ELETITRHYASLREAQSRLNGCRTSVNELAPTKN GDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS Sbjct: 5 ELETITRHYASLREAQSRLNGCRTSVNELAPTKNASVVLPLIPLLPLALGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS 154
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|630358731|ref|XP_007868640.1| (hypothetical protein GLOTRDRAFT_131403 [Gloeophyllum trabeum ATCC 11539] >gi|521723033|gb|EPQ53394.1| hypothetical protein GLOTRDRAFT_131403 [Gloeophyllum trabeum ATCC 11539]) HSP 1 Score: 134.42 bits (337), Expect = 4.034e-37 Identity = 64/150 (42.67%), Postives = 99/150 (66.00%), Query Frame = 0 Query: 2 ASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTS 151 +S ++I+++ L I QL +++TQL EEL +T +A L++AQ++ C +V E+ P G ILVPLT SLYVPG +SD + V+VDVGTGYY++KT P+AK+Y E K+ I N E++ + +++K+ +L V Q KL +QT+ Sbjct: 4 SSTSHPQQINVADLDISQLAEVRTQLEEELNHLTSSFAQLKQAQAKFKNCIENVGEINPNNTGKTILVPLTNSLYVPGKLSDVEHVIVDVGTGYYVKKTRPQAKKYYEAKVDFIRGNLETLQETISKKQDNLNYVMNIIQAKLQAEAQTA 153
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|1023233360|gb|KZT30141.1| (Prefoldin-domain-containing protein [Neolentinus lepideus HHB14362 ss-1]) HSP 1 Score: 128.642 bits (322), Expect = 6.125e-35 Identity = 64/150 (42.67%), Postives = 98/150 (65.33%), Query Frame = 0 Query: 2 ASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTS 151 AS ++I+++ L I QL +++TQL EEL +T +A L++AQ++ C +V E+ P G ILVPLT SLYVPG +SD + V+VDVGTGYY++KT +AK+Y E K+ I N ES+ + +++K+ +L V Q KL +Q++ Sbjct: 4 ASTSQPQQINVADLDIAQLGEVRTQLEEELNHLTNSFAQLKQAQTKFKACIDNVGEINPNNIGRTILVPLTNSLYVPGKLSDFEHVIVDVGTGYYVKKTRSQAKKYYETKVDFIRGNLESLQETISKKQDNLNYVLNIIQVKLQAEAQSA 153
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|673042721|ref|XP_008875321.1| (prefoldin, alpha subunit [Aphanomyces invadans] >gi|574468994|gb|ETV96010.1| prefoldin, alpha subunit [Aphanomyces invadans]) HSP 1 Score: 128.257 bits (321), Expect = 7.508e-35 Identity = 60/144 (41.67%), Postives = 93/144 (64.58%), Query Frame = 0 Query: 6 GEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQ 149 + E+ L L++EQLN LKTQ +EL+ +T + LREAQ+R + + ++ L P G +LVPLT S+YVPGT+++ + VLVDVGTGY++EK + +AK ++++K+A + N ES+ VL K +L V Q K+ + Q Sbjct: 3 AQNEVSLMDLTMEQLNNLKTQFEQELQQLTSSFTGLREAQTRFSDSKVALQSLQPANLGKRVLVPLTSSMYVPGTLTNVETVLVDVGTGYFVEKNVDEAKGFMDRKVAFLQQNTESLKDVLENKRTNLEAVIQVMQLKMRLAEQ 146
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|763721478|gb|KJA18944.1| (hypothetical protein HYPSUDRAFT_144335 [Hypholoma sublateritium FD-334 SS-4]) HSP 1 Score: 127.487 bits (319), Expect = 1.647e-34 Identity = 56/143 (39.16%), Postives = 97/143 (67.83%), Query Frame = 0 Query: 7 EREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQ 149 ++ ++++ L I QL +++ QL +EL +T +A L++AQ++ C +VNE+ P+ G ILVPLT SLYVPG +SD D V+VD+GTGYY++KT P+A ++ K+ I TN +++ + +K +++ ++G Q+K+ V +Q Sbjct: 4 QQTVNVADLDIAQLTEVRKQLEDELTHLTNSFAQLKQAQAKFKSCLENVNEVRPSNKGKTILVPLTNSLYVPGKLSDPDHVIVDIGTGYYVQKTRPQAVKHYADKVEYIRTNVDTLEDTIQKKRENMNYLTGILQQKIQVETQ 146
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|669145634|ref|XP_008608379.1| (prefoldin, alpha subunit [Saprolegnia diclina VS20] >gi|530739810|gb|EQC38052.1| prefoldin, alpha subunit [Saprolegnia diclina VS20]) HSP 1 Score: 126.331 bits (316), Expect = 3.494e-34 Identity = 60/143 (41.96%), Postives = 93/143 (65.03%), Query Frame = 0 Query: 9 EIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTS 151 E+ L LS+EQLN LKTQ +EL+ +T ++ LREAQ+R + ++ L PT G ++LVPLT S++VPG +S+ VLVDVGTGY++EK + AK ++++K+A + N +S+ +V+ K +L V Q K+ + Q S Sbjct: 4 EVSLMDLSLEQLNNLKTQFEQELQQLTSSFSGLREAQTRFADSKGALQALEPTNLGKKVLVPLTSSMFVPGKLSNVKSVLVDVGTGYFVEKNVDDAKSFMDRKVAFLQQNTDSLKEVIEAKRTNLEAVIQVMQLKIRIGEQQS 146
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|299472055|emb|CBN80138.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 125.946 bits (315), Expect = 7.577e-34 Identity = 65/144 (45.14%), Postives = 96/144 (66.67%), Query Frame = 0 Query: 1 MASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKL 144 MA ++ IDLS LS+EQLNQ+KTQ EE++T++ ++ LR+AQ+R + ++V L EILVPLTQSLYVPG I +ADK++VDVGTGYY++K K E+L +K ++ TN ES+ + K K+L + ++K+ Sbjct: 1 MAGGQQQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARFSESISAVEALGSKTEDKEILVPLTQSLYVPGRIVEADKMMVDVGTGYYVQKDQQKTAEFLGRKKDMVTTNLESLRNAIDVKRKNLEAIVMVMRRKI 144
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|698795396|ref|XP_009830727.1| (prefoldin, alpha subunit [Aphanomyces astaci] >gi|574114303|gb|ETV79791.1| prefoldin, alpha subunit [Aphanomyces astaci]) HSP 1 Score: 125.561 bits (314), Expect = 7.598e-34 Identity = 59/144 (40.97%), Postives = 92/144 (63.89%), Query Frame = 0 Query: 6 GEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQ 149 + E+ L L++EQLN LKTQ +EL+ +T + LREAQ+R + + ++ L P G +LVPLT S+YVPG +++ + VLVDVGTGY++EK + +AK ++++K+A + N ES+ VL K +L V Q K+ + Q Sbjct: 3 AQNEVSLMDLTLEQLNNLKTQFEQELQQLTSSFTGLREAQTRFSDSKVALQSLQPANLGKRVLVPLTASMYVPGKLTNVETVLVDVGTGYFVEKNVEEAKGFMDRKVAFLQQNTESLKDVLENKRTNLEAVIQVMQLKMRLAEQ 146
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|813184298|ref|XP_012206321.1| (prefoldin [Saprolegnia parasitica CBS 223.65] >gi|813196222|ref|XP_012208539.1| prefoldin [Saprolegnia parasitica CBS 223.65] >gi|641526356|gb|KDO20727.1| prefoldin [Saprolegnia parasitica CBS 223.65] >gi|641528829|gb|KDO23033.1| prefoldin [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 124.02 bits (310), Expect = 2.853e-33 Identity = 59/143 (41.26%), Postives = 92/143 (64.34%), Query Frame = 0 Query: 9 EIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTS 151 E+ L LS+EQLN LKTQ +EL+ +T ++ LREAQ+R + ++ L PT G ++LVPLT S++VPG +S+ VLVDVGTGY++EK + AK ++++K+ + N +S+ +V+ K +L V Q K+ + Q S Sbjct: 4 EVSLMDLSLEQLNNLKTQFEQELQQLTSSFSGLREAQTRFADSKGALQALEPTNLGKKVLVPLTSSMFVPGKLSNVKSVLVDVGTGYFVEKNVDDAKSFMDRKVEFLQKNTDSLKEVIEAKRTNLEAVIQVMQLKIRIGEQQS 146 The following BLAST results are available for this feature:
BLAST of EWM20801.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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