EWM20801.1, cds9872 (CDS) Nannochloropsis gaditana

Overview
NameEWM20801.1
Unique Namecds9872
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037257.1:92571..92657 +
Alignment locationKK037257.1:92834..92936 +
Alignment locationKK037257.1:93081..93148 +
Alignment locationKK037257.1:93453..93566 +
Alignment locationKK037257.1:93737..93859 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20801.1
Productprefoldin subunit
Orig transcript idgnl|cribi|Naga_100935g1.5897.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037257.1supercontigKK037257.1:92571..92657 +
KK037257.1supercontigKK037257.1:92834..92936 +
KK037257.1supercontigKK037257.1:93081..93148 +
KK037257.1supercontigKK037257.1:93453..93566 +
KK037257.1supercontigKK037257.1:93737..93859 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
GO:0016272prefoldin complex
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0051082unfolded protein binding
Vocabulary: INTERPRO
TermDefinition
IPR004127Prefoldin_subunit_alpha
IPR011599PFD_alpha_archaea
IPR009053Prefoldin
Homology
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|585100700|gb|EWM20801.1| (prefoldin subunit [Nannochloropsis gaditana])

HSP 1 Score: 333.183 bits (853), Expect = 1.080e-115
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0
Query:    1 MASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS 164
            MASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS
Sbjct:    1 MASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS 164          
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|553177691|ref|XP_005852487.1| (prefoldin subunit 5 [Nannochloropsis gaditana CCMP526] >gi|422296045|gb|EKU23344.1| prefoldin subunit 5 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 268.47 bits (685), Expect = 3.765e-90
Identity = 135/150 (90.00%), Postives = 135/150 (90.00%), Query Frame = 0
Query:   30 ELETITRHYASLREAQSRLNGCRTSVNELAPTKN---------------GDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS 164
            ELETITRHYASLREAQSRLNGCRTSVNELAPTKN               GDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS
Sbjct:    5 ELETITRHYASLREAQSRLNGCRTSVNELAPTKNASVVLPLIPLLPLALGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTSQARQAQRAAQGMS 154          
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|630358731|ref|XP_007868640.1| (hypothetical protein GLOTRDRAFT_131403 [Gloeophyllum trabeum ATCC 11539] >gi|521723033|gb|EPQ53394.1| hypothetical protein GLOTRDRAFT_131403 [Gloeophyllum trabeum ATCC 11539])

HSP 1 Score: 134.42 bits (337), Expect = 4.034e-37
Identity = 64/150 (42.67%), Postives = 99/150 (66.00%), Query Frame = 0
Query:    2 ASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTS 151
            +S    ++I+++ L I QL +++TQL EEL  +T  +A L++AQ++   C  +V E+ P   G  ILVPLT SLYVPG +SD + V+VDVGTGYY++KT P+AK+Y E K+  I  N E++ + +++K+ +L  V    Q KL   +QT+
Sbjct:    4 SSTSHPQQINVADLDISQLAEVRTQLEEELNHLTSSFAQLKQAQAKFKNCIENVGEINPNNTGKTILVPLTNSLYVPGKLSDVEHVIVDVGTGYYVKKTRPQAKKYYEAKVDFIRGNLETLQETISKKQDNLNYVMNIIQAKLQAEAQTA 153          
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|1023233360|gb|KZT30141.1| (Prefoldin-domain-containing protein [Neolentinus lepideus HHB14362 ss-1])

HSP 1 Score: 128.642 bits (322), Expect = 6.125e-35
Identity = 64/150 (42.67%), Postives = 98/150 (65.33%), Query Frame = 0
Query:    2 ASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTS 151
            AS    ++I+++ L I QL +++TQL EEL  +T  +A L++AQ++   C  +V E+ P   G  ILVPLT SLYVPG +SD + V+VDVGTGYY++KT  +AK+Y E K+  I  N ES+ + +++K+ +L  V    Q KL   +Q++
Sbjct:    4 ASTSQPQQINVADLDIAQLGEVRTQLEEELNHLTNSFAQLKQAQTKFKACIDNVGEINPNNIGRTILVPLTNSLYVPGKLSDFEHVIVDVGTGYYVKKTRSQAKKYYETKVDFIRGNLESLQETISKKQDNLNYVLNIIQVKLQAEAQSA 153          
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|673042721|ref|XP_008875321.1| (prefoldin, alpha subunit [Aphanomyces invadans] >gi|574468994|gb|ETV96010.1| prefoldin, alpha subunit [Aphanomyces invadans])

HSP 1 Score: 128.257 bits (321), Expect = 7.508e-35
Identity = 60/144 (41.67%), Postives = 93/144 (64.58%), Query Frame = 0
Query:    6 GEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQ 149
             + E+ L  L++EQLN LKTQ  +EL+ +T  +  LREAQ+R +  + ++  L P   G  +LVPLT S+YVPGT+++ + VLVDVGTGY++EK + +AK ++++K+A +  N ES+  VL  K  +L  V    Q K+ +  Q
Sbjct:    3 AQNEVSLMDLTMEQLNNLKTQFEQELQQLTSSFTGLREAQTRFSDSKVALQSLQPANLGKRVLVPLTSSMYVPGTLTNVETVLVDVGTGYFVEKNVDEAKGFMDRKVAFLQQNTESLKDVLENKRTNLEAVIQVMQLKMRLAEQ 146          
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|763721478|gb|KJA18944.1| (hypothetical protein HYPSUDRAFT_144335 [Hypholoma sublateritium FD-334 SS-4])

HSP 1 Score: 127.487 bits (319), Expect = 1.647e-34
Identity = 56/143 (39.16%), Postives = 97/143 (67.83%), Query Frame = 0
Query:    7 EREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQ 149
            ++ ++++ L I QL +++ QL +EL  +T  +A L++AQ++   C  +VNE+ P+  G  ILVPLT SLYVPG +SD D V+VD+GTGYY++KT P+A ++   K+  I TN +++   + +K +++  ++G  Q+K+ V +Q
Sbjct:    4 QQTVNVADLDIAQLTEVRKQLEDELTHLTNSFAQLKQAQAKFKSCLENVNEVRPSNKGKTILVPLTNSLYVPGKLSDPDHVIVDIGTGYYVQKTRPQAVKHYADKVEYIRTNVDTLEDTIQKKRENMNYLTGILQQKIQVETQ 146          
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|669145634|ref|XP_008608379.1| (prefoldin, alpha subunit [Saprolegnia diclina VS20] >gi|530739810|gb|EQC38052.1| prefoldin, alpha subunit [Saprolegnia diclina VS20])

HSP 1 Score: 126.331 bits (316), Expect = 3.494e-34
Identity = 60/143 (41.96%), Postives = 93/143 (65.03%), Query Frame = 0
Query:    9 EIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTS 151
            E+ L  LS+EQLN LKTQ  +EL+ +T  ++ LREAQ+R    + ++  L PT  G ++LVPLT S++VPG +S+   VLVDVGTGY++EK +  AK ++++K+A +  N +S+ +V+  K  +L  V    Q K+ +  Q S
Sbjct:    4 EVSLMDLSLEQLNNLKTQFEQELQQLTSSFSGLREAQTRFADSKGALQALEPTNLGKKVLVPLTSSMFVPGKLSNVKSVLVDVGTGYFVEKNVDDAKSFMDRKVAFLQQNTDSLKEVIEAKRTNLEAVIQVMQLKIRIGEQQS 146          
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|299472055|emb|CBN80138.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 125.946 bits (315), Expect = 7.577e-34
Identity = 65/144 (45.14%), Postives = 96/144 (66.67%), Query Frame = 0
Query:    1 MASVVGEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKL 144
            MA    ++ IDLS LS+EQLNQ+KTQ  EE++T++ ++  LR+AQ+R +   ++V  L       EILVPLTQSLYVPG I +ADK++VDVGTGYY++K   K  E+L +K  ++ TN ES+   +  K K+L  +    ++K+
Sbjct:    1 MAGGQQQQSIDLSVLSLEQLNQMKTQHEEEVQTLSGNFMKLRDAQARFSESISAVEALGSKTEDKEILVPLTQSLYVPGRIVEADKMMVDVGTGYYVQKDQQKTAEFLGRKKDMVTTNLESLRNAIDVKRKNLEAIVMVMRRKI 144          
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|698795396|ref|XP_009830727.1| (prefoldin, alpha subunit [Aphanomyces astaci] >gi|574114303|gb|ETV79791.1| prefoldin, alpha subunit [Aphanomyces astaci])

HSP 1 Score: 125.561 bits (314), Expect = 7.598e-34
Identity = 59/144 (40.97%), Postives = 92/144 (63.89%), Query Frame = 0
Query:    6 GEREIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQ 149
             + E+ L  L++EQLN LKTQ  +EL+ +T  +  LREAQ+R +  + ++  L P   G  +LVPLT S+YVPG +++ + VLVDVGTGY++EK + +AK ++++K+A +  N ES+  VL  K  +L  V    Q K+ +  Q
Sbjct:    3 AQNEVSLMDLTLEQLNNLKTQFEQELQQLTSSFTGLREAQTRFSDSKVALQSLQPANLGKRVLVPLTASMYVPGKLTNVETVLVDVGTGYFVEKNVEEAKGFMDRKVAFLQQNTESLKDVLENKRTNLEAVIQVMQLKMRLAEQ 146          
BLAST of EWM20801.1 vs. NCBI_GenBank
Match: gi|813184298|ref|XP_012206321.1| (prefoldin [Saprolegnia parasitica CBS 223.65] >gi|813196222|ref|XP_012208539.1| prefoldin [Saprolegnia parasitica CBS 223.65] >gi|641526356|gb|KDO20727.1| prefoldin [Saprolegnia parasitica CBS 223.65] >gi|641528829|gb|KDO23033.1| prefoldin [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 124.02 bits (310), Expect = 2.853e-33
Identity = 59/143 (41.26%), Postives = 92/143 (64.34%), Query Frame = 0
Query:    9 EIDLSKLSIEQLNQLKTQLGEELETITRHYASLREAQSRLNGCRTSVNELAPTKNGDEILVPLTQSLYVPGTISDADKVLVDVGTGYYIEKTLPKAKEYLEKKIAVINTNAESVAQVLTQKEKSLRMVSGYFQKKLMVMSQTS 151
            E+ L  LS+EQLN LKTQ  +EL+ +T  ++ LREAQ+R    + ++  L PT  G ++LVPLT S++VPG +S+   VLVDVGTGY++EK +  AK ++++K+  +  N +S+ +V+  K  +L  V    Q K+ +  Q S
Sbjct:    4 EVSLMDLSLEQLNNLKTQFEQELQQLTSSFSGLREAQTRFADSKGALQALEPTNLGKKVLVPLTSSMFVPGKLSNVKSVLVDVGTGYFVEKNVDDAKSFMDRKVEFLQKNTDSLKEVIEAKRTNLEAVIQVMQLKIRIGEQQS 146          
The following BLAST results are available for this feature:
BLAST of EWM20801.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100700|gb|EWM20801.1|1.080e-115100.00prefoldin subunit [Nannochloropsis gaditana][more]
gi|553177691|ref|XP_005852487.1|3.765e-9090.00prefoldin subunit 5 [Nannochloropsis gaditana CCMP... [more]
gi|630358731|ref|XP_007868640.1|4.034e-3742.67hypothetical protein GLOTRDRAFT_131403 [Gloeophyll... [more]
gi|1023233360|gb|KZT30141.1|6.125e-3542.67Prefoldin-domain-containing protein [Neolentinus l... [more]
gi|673042721|ref|XP_008875321.1|7.508e-3541.67prefoldin, alpha subunit [Aphanomyces invadans] >g... [more]
gi|763721478|gb|KJA18944.1|1.647e-3439.16hypothetical protein HYPSUDRAFT_144335 [Hypholoma ... [more]
gi|669145634|ref|XP_008608379.1|3.494e-3441.96prefoldin, alpha subunit [Saprolegnia diclina VS20... [more]
gi|299472055|emb|CBN80138.1|7.577e-3445.14conserved unknown protein [Ectocarpus siliculosus][more]
gi|698795396|ref|XP_009830727.1|7.598e-3440.97prefoldin, alpha subunit [Aphanomyces astaci] >gi|... [more]
gi|813184298|ref|XP_012206321.1|2.853e-3341.26prefoldin [Saprolegnia parasitica CBS 223.65] >gi|... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9903rna9903Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications