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Properties
| Property Name | Value |
|---|
| Product | protein of unknown function DUF23 |
| Orig transcript id | gnl|cribi|Naga_100164g3.9744.mrna |
| Orig protein id | gnl|cribi|Naga_100164g3.9744 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037256.1 | supercontig | KK037256.1:239372..241994 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9842 ID=rna9842|Name=rna9842|organism=Nannochloropsis gaditana|type=mRNA|length=1292bp
AGGCGACACCGTCATCTTTACAACTTCACAAGTGATTTATTTGATTTTTA
TATGCTAAGCACATGAAGGATTAAATTTGCGAGTCTGGCATACTCACACC
AACATTCAATGGTTTGTGTCCCTCCTATCTTTATTTCGACAAAAACATAG
CGCGACCATGGGGCGAGCATTTTCTCCTCTTTCAAGTATTCTTCTCCTCC
TTTTAATGCTTGTACTCATGCATTCTCCGGCATTCGCTGGCACCAAAAGA
AATAAAGTGACCCGTGCTGAGCGTCGAGAGCGGAAAAAGGGATGCATTTT
GAAATTTTATCCAAAAAACCCCAAGGAGGCTTGGCCCACGACTGCCTCTT
CAGACGGTGTTTATCGCCTGGCCGTAGTCATCCGAAACCGGAAAAGGGGT
TCTTTGTACAAGAACGTCTATTTTTCTTTTCAAAAACCCGCCACGGCTTC
CTGGGCAGGGGAGCCCCGGGCAAAGCCGGCCTTGCCGGGCGCGACTCTGA
TTCCTCCTTTCTTGCCAAGCGCATGGTGGCTATATGGCCCATTCAACGTA
AGCGGAGGGAGACGACAGTATGTTGAGATTGCCTATACACTGTCGGCCTG
CTCGCCTGGCATTATATGGAATGTAACCACCAGCATCGTCCCAGTTCCTC
CATTTTTCCAACGGCCACCCTCAGAGGCTTTACCAGCGACATGCCTGGCG
TATGCATATGGGCGTCAATATGCGGGCAAGACTCCATGTGTTTAGGAGAA
TTTATTTCGTCCACACGCTTAGATATGCGAGTTTGCTCGATGGCGAGATA
AAAGATTGAATCTGCTACCCATGTCAGTTGGAAGAAAGTCCAAGCAGGAG
ATACATCACTATATCAAGAGTTGTTCCGCCAGAAGCCTAAAAGGATCAAC
TTTACCATACGACTTATTCTGTGAGCATGCTGTTAAAGAGTTTTATAGAC
ACAAAAAGCCCCACATGTATCGAAATGACATCAAGTGGTGAATGGCCAAG
ATGTCGAAATATTTTATTTCGGGCATCCGCGACATTGATCCGCCGAGTGC
CGACTCCACCCTTTTGAGATGATTCTTGGCTTCCTCCCAAAATTCCACCA
TACAGCCTCCTTATCCTTTCAATTGCTCGATTTGAGGCTCAGTATTATAT
TCTTGCTCACATATGTCACGTTGCGCCATTAAATCACTGGCATTACAAAA
GCCTCTAGCATGCGCATTTGATCCCTTACGCGCAGCACGTGTCTATGGTC
AGCCTCCCAACTTTAGTTTAAATAGTCCCAAAAAATTTAAGT back to topprotein sequence of rna9842 >rna9842-protein ID=rna9842-protein|Name=rna9842|organism=Nannochloropsis gaditana|type=polypeptide|length=601bp
MATKTFHFQRSTCCNPYRRIAALSFAILGLTLVSLCLSPRFDVTSFKLLA
FNLIDETPSSNASNLVTITTITNSSSIPPTDTTAPALHASLTPMIMPAWT
DNHRFYVLGGILTRDQIDERLCMDVMVAGRRMFLEVKENFGVRDLNEDWS
LGKSHNVADPDEVVALGGKVLCHVSGEGNDVEEEAVLVPMRSPFSPYASG
LVHIIRCPVADAFPLDAGDADVTVRVVFGGNQTQDSIKYGWEWPRSNGTD
AGRGQGKGGEERFRVVVPRATRHAGYFSYLPEASKLDPWQAQPDKLHLCV
AGLYTNFTCPLLDQTLEFVEYHTQQGVAHIHLGVDYPVGSESWKAVLRVL
RPYIDERKVSVMSTQSVRGPGWIGTDQFKLYFYASCLAYTKGLATWVGIW
DIDEFLVPRDEGASTIVQSLDTVLREADKTAKDVCFMSFTSFGFMEVKEL
RTIGNRTWAGQMFGHWRQAKSDDNWTKSILSNRNAYFTGSHYPGACRDLG
GRRWGENPRADLWRINASVLAMHHYRGKVSSVKKPKSNVAEDDEYGMRLF
PAVLDGLRSRKADEIVGRECGFRPSMAVEYVEGPEDQGRVAVVGVPRKGD
E back to topmRNA from alignment at KK037256.1:239372..241994+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9842 ID=rna9842|Name=rna9842|organism=Nannochloropsis gaditana|type=mRNA|length=2623bp|location=Sequence derived from alignment at KK037256.1:239372..241994+ (Nannochloropsis gaditana)
CCAGACACTGCTATCTAAATCTTGCCGGACACGCACCTATCCAAGTGGAC
AGAGAACGCAAACTTGGTTATCGTCAATGGCAAACGATTGCGACATTGCC
TAAAGCTATCCTTTCCTATAAGGCCTCGATCATCACTAAGAAAGAAAGAC
CCTACTGACCTCTGCAGTATAAGATGGCCACAAAGACTTTCCATTTCCAA
CGCTCTACGTGCTGCAACCCTTATCGACGCATCGCAGCATTGTCCTTCGC
CATTCTCGGCCTGACCCTGGTTTCATTGTGTCTTTCCCCGCGCTTCGACG
TGACCTCGTTCAAACTCCTAGCCTTCAACCTGATAGACGAGACTCCATCC
AGCAATGCAAGCAACCTCGTGACCATCACGACCATCACCAATAGCAGCAG
TATACCCCCTACTGACacaacagcaccagcacttCATGCAAGCCTCACCC
CTATGATCATGCCCGCTTGGACGGACAACCATCGTTTCTATGTGTTGGGG
GGGATCTTGACACGGGACCAGATCGATGAGCGTTTGTGCatggacgtgat
ggtggcgggtcGGCGCATGTTCCTGGAGGTAAAAGAGAACTTCGGTGTGC
GTGACCTCAACGAGGATTGGTCTTTGGGGAAGTCGCACAACGTGGCAGAT
CCCGACGAGGTCGTGGCGTTGGGTGGGAAAGTACTGTGTCACGTCagcgg
agaggggaacgacgtggaggaagaggccgtgcttgtcccTATGAGAAGCC
CTTTCAGCCCTTACGCAAGCGGACTCGTCCATATCATTCGTTGTCCTGTG
GCGGATGCCTTTCCGCTGGACGCTGGAGACGCGGATGTGACCGTCCGGGT
CGTATTCGGCGGCAATCAAACACAGGACTCCATCAAGTATGGATGGGAGT
GGCCCCGAAGCAACGGCACGGACGCTGGTCGAGGGCAGGGCAAGGGTGGC
GAAGAGCGGTTTCGAGTCGTCGTGCCACGCGCGACGCGTCACGCGGGCTA
CTTTAGCTACCTACCAGAGGCTTCCAAACTGGATCCATGGCAAGCTCAGC
CCGACAAACTGCACCTCTGTGTGGCGGGACTGTACACAAACTTCACCTGT
CCGCTGCTGGATCAGACGTTGGAGTTTGTCGAGTACCACACACAGCAAGG
GGTGGCGCACATCCACCTGGGAGTCGACTATCCTGTAGGATCGGAGTCGT
GGAAGGCCGTGCTGCGGGTGCTGCGGCCTTACATAGACGAGCGAAAGGTG
TCCGTTATGTCGACACAGAGCGTGCGAGGCCCTGGATGGATCGGGACGGA
CCAGTTCAAGCTCTATTTCTACGCCTCTTGTCTCGCCTACACCAAGGGCT
TGGCTACGTGGGTGGGCATCTGGGACATCGACGAGTTCCTGGTGCCACGT
GACGAGGGCGCAAGCACGATTGTGCAGTCGCTTGACACCGTGCTGAGAGA
GGCTGACAAGACAGCGAAGGACGTCTGTTTCATGTCTTTCACGTCATTTG
GCTTCAtggaggtcaaggagctcAGGACCATCGGCAACCGGACATGGGCG
GGACAGATGTTTGGGCACTGGCGGCAAGCAAAGAGTGACGACAACTGGAC
AAAGTCGATCCTGTCCAACCGAAACGCCTACTTCACTGGCTCCCACTACC
CGGGAGCTTGCAGGGACCTAGGGGGTAGACGATGGGGCGAGAATCCACGC
GCAGACCTCTGGCGTATCAATGCAAGCGTACTAGCCATGCATCACTATCG
AGGGAAGGTGTCCTCGGTAAAGAAGCCGAAGTCCAACGtcgcggaggacg
acgagtaCGGCATGCGTCTTTTCCCCGCGGTCTTGGACGGCCTACGGTCA
AGGAAGGCAGACGAGAtcgtggggagggagtgcggcTTCCGCCCGTCCAT
GGCTGTCGAGTATGTCGAGGGTCCTGAGGACCAGGGACGAGTAGCCGTGG
TGGGAGtgccaaggaagggagatgagTAGGAGCAACGTTTGACTCATGTC
CTGAGCAGAGATGTAGGGTTAGGGAGCGAGAAGCAAGGTATGCTCGAGGC
TCTTTCGAAGCAGCTACACGCATGTGTACGTGGCGTGGTCAAGCTCTGCA
AGACATTCGGCTTGCATGAGCGCTGGATCAATGACATACAGCGGACAAAC
ACGACGATAAGCGAGATAATACACCAGTGGTCCATCCGAAGATTGCTTTG
GAGTCGTGTACGAAAATCAAATGACCGTTTCTTGATCATCCCGAGTTGGC
GAGGGCGCACTTCATAAATGACCGTAATAAAACGGGCGGAATGTTACCAT
TGGTACATGGTGATAGACCTGTCTGCGTCTAAAACTATCCCGAGTAGCTG
ACTATATTTTGCCTGTGGCAGTGTCTCCTATCATCCTTTGTACAAAGATA
CCGTGGTGGGAGTGCCAATGAAGGGAGATGAGTAGGAGCAACGTTTGACT
CATGTCCTGAACAGAGATGTAGGGAGCAAGAAACAAGCTAGGTGTCGCAA
GATGTGTGTCCTATGCAGTGGAGGATGATTGTGCGACAGGCGAGAGATGC
ATACTTGTACAAGCGTGGTGGTCAGGGGCTTGAGAGGGGTTTGTGGTACA
TGAAAGGAACAAGAATATGCTGT back to topCoding sequence (CDS) from alignment at KK037256.1:239372..241994+ >rna9842 ID=rna9842|Name=rna9842|organism=Nannochloropsis gaditana|type=CDS|length=1806bp|location=Sequence derived from alignment at KK037256.1:239372..241994+ (Nannochloropsis gaditana)
ATGGCCACAAAGACTTTCCATTTCCAACGCTCTACGTGCTGCAACCCTTA
TCGACGCATCGCAGCATTGTCCTTCGCCATTCTCGGCCTGACCCTGGTTT
CATTGTGTCTTTCCCCGCGCTTCGACGTGACCTCGTTCAAACTCCTAGCC
TTCAACCTGATAGACGAGACTCCATCCAGCAATGCAAGCAACCTCGTGAC
CATCACGACCATCACCAATAGCAGCAGTATACCCCCTACTGACacaacag
caccagcacttCATGCAAGCCTCACCCCTATGATCATGCCCGCTTGGACG
GACAACCATCGTTTCTATGTGTTGGGGGGGATCTTGACACGGGACCAGAT
CGATGAGCGTTTGTGCatggacgtgatggtggcgggtcGGCGCATGTTCC
TGGAGGTAAAAGAGAACTTCGGTGTGCGTGACCTCAACGAGGATTGGTCT
TTGGGGAAGTCGCACAACGTGGCAGATCCCGACGAGGTCGTGGCGTTGGG
TGGGAAAGTACTGTGTCACGTCagcggagaggggaacgacgtggaggaag
aggccgtgcttgtcccTATGAGAAGCCCTTTCAGCCCTTACGCAAGCGGA
CTCGTCCATATCATTCGTTGTCCTGTGGCGGATGCCTTTCCGCTGGACGC
TGGAGACGCGGATGTGACCGTCCGGGTCGTATTCGGCGGCAATCAAACAC
AGGACTCCATCAAGTATGGATGGGAGTGGCCCCGAAGCAACGGCACGGAC
GCTGGTCGAGGGCAGGGCAAGGGTGGCGAAGAGCGGTTTCGAGTCGTCGT
GCCACGCGCGACGCGTCACGCGGGCTACTTTAGCTACCTACCAGAGGCTT
CCAAACTGGATCCATGGCAAGCTCAGCCCGACAAACTGCACCTCTGTGTG
GCGGGACTGTACACAAACTTCACCTGTCCGCTGCTGGATCAGACGTTGGA
GTTTGTCGAGTACCACACACAGCAAGGGGTGGCGCACATCCACCTGGGAG
TCGACTATCCTGTAGGATCGGAGTCGTGGAAGGCCGTGCTGCGGGTGCTG
CGGCCTTACATAGACGAGCGAAAGGTGTCCGTTATGTCGACACAGAGCGT
GCGAGGCCCTGGATGGATCGGGACGGACCAGTTCAAGCTCTATTTCTACG
CCTCTTGTCTCGCCTACACCAAGGGCTTGGCTACGTGGGTGGGCATCTGG
GACATCGACGAGTTCCTGGTGCCACGTGACGAGGGCGCAAGCACGATTGT
GCAGTCGCTTGACACCGTGCTGAGAGAGGCTGACAAGACAGCGAAGGACG
TCTGTTTCATGTCTTTCACGTCATTTGGCTTCAtggaggtcaaggagctc
AGGACCATCGGCAACCGGACATGGGCGGGACAGATGTTTGGGCACTGGCG
GCAAGCAAAGAGTGACGACAACTGGACAAAGTCGATCCTGTCCAACCGAA
ACGCCTACTTCACTGGCTCCCACTACCCGGGAGCTTGCAGGGACCTAGGG
GGTAGACGATGGGGCGAGAATCCACGCGCAGACCTCTGGCGTATCAATGC
AAGCGTACTAGCCATGCATCACTATCGAGGGAAGGTGTCCTCGGTAAAGA
AGCCGAAGTCCAACGtcgcggaggacgacgagtaCGGCATGCGTCTTTTC
CCCGCGGTCTTGGACGGCCTACGGTCAAGGAAGGCAGACGAGAtcgtggg
gagggagtgcggcTTCCGCCCGTCCATGGCTGTCGAGTATGTCGAGGGTC
CTGAGGACCAGGGACGAGTAGCCGTGGTGGGAGtgccaaggaagggagat
gagTAG back to top
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