EWM20958.1, cds9714 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20958.1 vs. NCBI_GenBank
Match: gi|585100928|gb|EWM20958.1| (hypothetical protein Naga_101659g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 253.062 bits (645), Expect = 3.019e-85 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0 Query: 1 SAYLFCTTFLSLLWGQGAAQGVHAHAHPYTPPGKGRGLRGAFLSTHETGTGTGSGKWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQREIMRVEGERAAEIKLAAAEIKRVLQSGQKSGPFDTP 125 SAYLFCTTFLSLLWGQGAAQGVHAHAHPYTPPGKGRGLRGAFLSTHETGTGTGSGKWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQREIMRVEGERAAEIKLAAAEIKRVLQSGQKSGPFDTP Sbjct: 1 SAYLFCTTFLSLLWGQGAAQGVHAHAHPYTPPGKGRGLRGAFLSTHETGTGTGSGKWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQREIMRVEGERAAEIKLAAAEIKRVLQSGQKSGPFDTP 125
BLAST of EWM20958.1 vs. NCBI_GenBank
Match: gi|585099237|gb|EWM20020.1| (hypothetical protein Naga_102283g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 170.629 bits (431), Expect = 1.578e-51 Identity = 107/145 (73.79%), Postives = 108/145 (74.48%), Query Frame = 0 Query: 1 SAYLFCTTFLSLLWGQGAAQGVHAHAHPYTPPGKGRGLRGAFLSTHETGTGTGSGKWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQR---------------------------------EIMRVEGERAAEIKLAAAEIKRV 112 SAYLFCTTFLSLLWGQGAAQGVHAHAHPYTPPGKGRGLRGAFLSTHETGTGTGSGK TAMVISVGLQIVVGVLGVAS TA AVHHLDQR E+ RVEGERAAEIKLAAAEIKRV Sbjct: 3 SAYLFCTTFLSLLWGQGAAQGVHAHAHPYTPPGKGRGLRGAFLSTHETGTGTGSGKGTAMVISVGLQIVVGVLGVASVTAAAVHHLDQRELAAAIKLAAAEMKRVEGERAAEMKRVEGERAAEMKRVEGERAAEIKLAAAEIKRV 147
BLAST of EWM20958.1 vs. NCBI_GenBank
Match: gi|585098970|gb|EWM19937.1| (hypothetical protein Naga_102907g1 [Nannochloropsis gaditana]) HSP 1 Score: 59.3066 bits (142), Expect = 1.869e-8 Identity = 43/89 (48.31%), Postives = 50/89 (56.18%), Query Frame = 0 Query: 29 YT-PPGKGRGLRGAFLSTHETGTGTGSGKWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQREIMRVEGERAAEI----KLAAAEIKRV 112 YT P GKGR LRG F ST TG GT +G+ + Q + V+GVA TAV V DQ EI +E + AAEI AAAEI RV Sbjct: 2 YTHPTGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEIKYIESKAAAEIARVEDKAAAEIARV 90
BLAST of EWM20958.1 vs. NCBI_GenBank
Match: gi|585099151|gb|EWM19988.1| (hypothetical protein Naga_102432g1 [Nannochloropsis gaditana]) HSP 1 Score: 55.8398 bits (133), Expect = 3.142e-7 Identity = 37/75 (49.33%), Postives = 43/75 (57.33%), Query Frame = 0 Query: 29 YT-PPGKGRGLRGAFLSTHETGTGTGSGKWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQREIMRVEGERAAEI 102 YT P GKGR LRG F ST TG GT SG+ + Q + V+GVA TAV V DQ EI +E + AAEI Sbjct: 2 YTHPTGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATFFQGIGAVVGVAGATAVVVRTFDQTEIKYIESKAAAEI 76
BLAST of EWM20958.1 vs. NCBI_GenBank
Match: gi|585099341|gb|EWM20054.1| (hypothetical protein Naga_102018g1 [Nannochloropsis gaditana]) HSP 1 Score: 56.9954 bits (136), Expect = 3.331e-7 Identity = 36/71 (50.70%), Postives = 41/71 (57.75%), Query Frame = 0 Query: 32 PGKGRGLRGAFLSTHETGTGTGSGKWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQREIMRVEGERAAEI 102 PGKGR LRG F ST TG GT SG+ + Q + VLGVA TAV V DQ EI V+ + AAEI Sbjct: 101 PGKGRVLRGGFSSTAHTGPGTSSGEELGKKWATIFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEI 171
BLAST of EWM20958.1 vs. NCBI_GenBank
Match: gi|585099166|gb|EWM19993.1| (hypothetical protein Naga_102410g1 [Nannochloropsis gaditana]) HSP 1 Score: 55.4546 bits (132), Expect = 6.179e-7 Identity = 35/71 (49.30%), Postives = 41/71 (57.75%), Query Frame = 0 Query: 32 PGKGRGLRGAFLSTHETGTGTGSGKWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQREIMRVEGERAAEI 102 PGKGR LRG F ST TG GT +G+ + Q + VLGVA TAV V DQ EI V+ + AAEI Sbjct: 40 PGKGRVLRGPFSSTAHTGPGTSNGEELGKKWATFFQGIGAVLGVAGATAVVVRTFDQTEIKYVQSKAAAEI 110
BLAST of EWM20958.1 vs. NCBI_GenBank
Match: gi|585099306|gb|EWM20041.1| (hypothetical protein Naga_102106g1 [Nannochloropsis gaditana]) HSP 1 Score: 55.8398 bits (133), Expect = 6.299e-7 Identity = 37/76 (48.68%), Postives = 42/76 (55.26%), Query Frame = 0 Query: 32 PGKGRGLRGAFLSTHETGTGTGSG-----KWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQREIMRVEGERAAEI 102 PGKGR LRG F ST TG GT SG KW + +G V+GVA TAV V DQ EI V+ + AAEI Sbjct: 40 PGKGRVLRGGFYSTAHTGPGTSSGEELGKKWATIFQGIG-----AVVGVAGATAVVVRTFDQTEIKYVQSKAAAEI 110
BLAST of EWM20958.1 vs. NCBI_GenBank
Match: gi|585099363|gb|EWM20066.1| (hypothetical protein Naga_101980g1 [Nannochloropsis gaditana]) HSP 1 Score: 56.225 bits (134), Expect = 7.189e-7 Identity = 37/76 (48.68%), Postives = 42/76 (55.26%), Query Frame = 0 Query: 32 PGKGRGLRGAFLSTHETGTGTGSG-----KWTAMVISVGLQIVVGVLGVASFTAVAVHHLDQREIMRVEGERAAEI 102 PGKGR LRG F ST TG GT +G KW + +G VLGVA TAV V DQ EI V+ + AAEI Sbjct: 121 PGKGRVLRGGFSSTAHTGPGTSNGEELGKKWATIFQGIG-----AVLGVAGATAVVVRTFDQTEIKYVQSKAAAEI 191 The following BLAST results are available for this feature:
BLAST of EWM20958.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 8
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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