EWM21085.1, cds9588 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21085.1 vs. NCBI_GenBank
Match: gi|585101141|gb|EWM21085.1| (thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0 Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0 Query: 1 MGNKPYKTGLKSEPCSTTAATVTASAPAPPSANTGCHSGSKPPAGKLIQAPMPLSEAKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTWDLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLERIGQRVRLIK 325 MGNKPYKTGLKSEPCSTTAATVTASAPAPPSANTGCHSGSKPPAGKLIQAPMPLSEAKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTWDLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLERIGQRVRLIK Sbjct: 1 MGNKPYKTGLKSEPCSTTAATVTASAPAPPSANTGCHSGSKPPAGKLIQAPMPLSEAKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTWDLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLERIGQRVRLIK 325
BLAST of EWM21085.1 vs. NCBI_GenBank
Match: gi|585112398|gb|EWM29817.1| (microcystin synthetase-associated thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 175.637 bits (444), Expect = 3.405e-48 Identity = 99/258 (38.37%), Postives = 146/258 (56.59%), Query Frame = 0 Query: 50 APMPLSEAKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTWDLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIK 307 A M EA++W + + A+ R++C +AGGNS+ Y+TWD+ E E+V VELPGRNAR E + + +L+ ++ A+ +GY+ S P L+ FGHSFGA++ T +AQ LR + K + +VSG PL R G S +DD ++ L+ MGGI E+A +R+++ FLPA +GDY A+D YVY P L ++A + D R + E W + TT K+F +FPGGHFF+K Sbjct: 128 AKMREEEARKWLSVKR-KDFARVRLVCFPYAGGNSNFYKTWDV-KEAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIP--------------LVFFGHSFGAIVSTLVAQILRNQYNYTPKHL-----VVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTT--KEFESRIFPGGHFFLK 362
BLAST of EWM21085.1 vs. NCBI_GenBank
Match: gi|585100986|gb|EWM20990.1| (microcystin synthetase-associated thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 157.147 bits (396), Expect = 9.991e-42 Identity = 98/306 (32.03%), Postives = 154/306 (50.33%), Query Frame = 0 Query: 19 AATVTASAPAPPSANTGCHSGSKPPAGKLIQAPMPLSEAKRWFVCRA-PRPEAKYRMLCLAWAGGNSSIYRTWDLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYT-PLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLERIGQRVR 322 AA ++ AP + + +G + P M + A++W + P AK R++CL WAG NS++++TWDL EVV VELP RNAR + P+ + ++L ++ A V+GYL S+ PL++FGHSFGAM+ HLA+ +++ + K + + G PL + G DD MIQ +V GG+ E+A + L++ L + D+ +D YV+ L L G +D R+ E + W + TT + FPGGHFF+KE + VL +G+ + Sbjct: 57 AAEPKKASDAPTDSQSTFKAGPRRPV-------MSEAMAQKWLLSNGKPVAGAKVRIICLGWAGANSNVFKTWDLKCG-EVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTT--------------PLVIFGHSFGAMIGLHLARIMKKEYDYTPK-----MCIFGGCRPLHRWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCS--IQIKTFPGGHFFLKEKEADVLAWLGKVIE 333
BLAST of EWM21085.1 vs. NCBI_GenBank
Match: gi|299116155|emb|CBN76062.1| (fatty acid-ACP thioesterase [Ectocarpus siliculosus]) HSP 1 Score: 152.525 bits (384), Expect = 8.968e-41 Identity = 99/280 (35.36%), Postives = 144/280 (51.43%), Query Frame = 0 Query: 52 MPLSEAKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTW--DLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVL-VSGMAPLD---KRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFR-----LVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIK-EHTSMVLERIGQ 319 M S ++W CR + +A R+ C AWAGG++S + W L VE+ A+ELPGR R KE L + +V + A+ +G L KP LFGHSFG++++ LA+ L+E D GK +P+ L VSG P D G S +S + DA++ +L+ +GG+P E+ EL++ FLP R DYTA + Y Y P R ++ GE D RA + +E W +T E F + +F GGHFF++ E VL +G Sbjct: 1 MSSSALEKWVACRRVKADASIRLFCAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVSAIVEGVAQALVTMGLLD----------------KPFALFGHSFGSLVMFELARKLKE---DAGK---IPVYLIVSGCCPPDMCVGGGSSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAYEGYRYELRPGDDSRPITCPIICLGGEEDGRAPRSDLERWSSLTAAE--FRLQMFGGGHFFLQGEGEQAVLTFLGD 256
BLAST of EWM21085.1 vs. NCBI_GenBank
Match: gi|738959279|ref|WP_036843513.1| (MULTISPECIES: thioesterase [Planktothrix] >gi|24744792|emb|CAD29792.1| microcystin synthetase associated thioesterase [Planktothrix agardhii NIVA-CYA 126/8] >gi|658298777|gb|KEI67172.1| McyT [Planktothrix agardhii NIVA-CYA 126/8] >gi|1108750467|emb|CUR25344.1| thioesterase putatively associated with nonribosomal peptide biosynthesis [Planktothrix rubescens]) HSP 1 Score: 149.443 bits (376), Expect = 1.154e-39 Identity = 90/271 (33.21%), Postives = 135/271 (49.82%), Query Frame = 0 Query: 57 AKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTW--DLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPL-VLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLERIGQRVRLI 324 A W P PEAK R+ C +AGG ++I+R+W L S VE+ +ELPGRN+R++ETP L+ L A+ LP T KP FGHS G ++ LA+ LR+ PL + VSG + + A+ + +I+ L + G P V + ELM + LP R D++ ++ Y Y LP L + AF G D + + +E W + T F+V++FPG HFF+ S+VLE +G+ + +I Sbjct: 14 ANSWVTYPKPNPEAKLRLFCFHYAGGGAAIFRSWIDSLPSTVEICPIELPGRNSRLRETPFTQMEPLIQALDRAI-------------LPHLT-----KPFAFFGHSMGGLVSFELARLLRKEYNQS------PLHLFVSGYRAPQIPDRTPQIHALPESELIKELRRYAGTPEAVLENAELMELLLPTLRADFSVVETYSYKDLPPLDCPITAFGGLEDLKPNALEIEAWREQTN--SAFSVEMFPGDHFFLHSAKSLVLECLGKSLLII 258
BLAST of EWM21085.1 vs. NCBI_GenBank
Match: gi|738948828|ref|WP_036833395.1| (MULTISPECIES: thioesterase [Planktothrix]) HSP 1 Score: 149.443 bits (376), Expect = 1.256e-39 Identity = 90/271 (33.21%), Postives = 135/271 (49.82%), Query Frame = 0 Query: 57 AKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTW--DLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPL-VLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLERIGQRVRLI 324 A W P PEAK R+ C +AGG ++I+R+W L S VE+ +ELPGRN+R++ETP L+ L A+ LP T KP FGHS G ++ LA+ LR+ PL + VSG + + A+ + +I+ L + G P V + ELM + LP R D++ ++ Y Y LP L + AF G D + + +E W + T F+V++FPG HFF+ S+VLE +G+ + +I Sbjct: 14 ANSWVTYPKPNPEAKLRLFCFHYAGGGAAIFRSWIDSLPSTVEICPIELPGRNSRLRETPFTQIEPLIQALDRAI-------------LPHLT-----KPFAFFGHSMGGLVSFELARLLRKEYNQS------PLHLFVSGYRAPQIPDRTPQIHALPESELIKELRRYAGTPEAVLENAELMELLLPTLRADFSVVETYSYKDLPPLDCPITAFGGLEDLKPNALEIEAWREQTN--SAFSVEMFPGDHFFLHSAKSLVLECLGKSLLII 258
BLAST of EWM21085.1 vs. NCBI_GenBank
Match: gi|1108369050|emb|CUM58412.1| (Gramicidin S biosynthesis protein GrsT [Planktothrix agardhii]) HSP 1 Score: 149.058 bits (375), Expect = 1.622e-39 Identity = 90/271 (33.21%), Postives = 135/271 (49.82%), Query Frame = 0 Query: 57 AKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTW--DLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPL-VLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLERIGQRVRLI 324 A W P PEAK R+ C +AGG ++I+R+W L S VE+ +ELPGRN+R++ETP L+ L A+ LP T KP FGHS G ++ LA+ LR+ PL + VSG + + A+ + +I+ L + G P V + ELM + LP R D++ ++ Y Y LP L + AF G D + + +E W + T F+V++FPG HFF+ S+VLE +G+ + +I Sbjct: 14 ANSWVTYPKPNPEAKLRLFCFHYAGGGAAIFRSWIDSLPSTVEICPIELPGRNSRLRETPFTQMEPLIQALDRAI-------------LPHLT-----KPFAFFGHSMGGLVSFELARLLRKEYNQS------PLHLFVSGYRAPQIPDRTPQIHALPESELIKELRRYAGTPEAVLENAELMALLLPTLRADFSVVETYSYKDLPPLDCPITAFGGLEDLKPNALEIEAWWEQTN--SAFSVEMFPGDHFFLHSAKSLVLECLGKSLLII 258
BLAST of EWM21085.1 vs. NCBI_GenBank
Match: gi|1072775762|ref|WP_069965625.1| (thioesterase [Desertifilum sp. IPPAS B-1220] >gi|1070572582|gb|OEJ76695.1| putative thioesterase [Desertifilum sp. IPPAS B-1220]) HSP 1 Score: 148.673 bits (374), Expect = 2.228e-39 Identity = 89/272 (32.72%), Postives = 133/272 (48.90%), Query Frame = 0 Query: 55 SEAKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTWD--LGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLERIGQRVRLI 324 S++K W P P AK R+ C +AGG + +R W L SEVEV +ELPGR AR+ E P L+ L A + +P T KP GHS GA++ LA++LR + G + + L+L AP + A+ D ++Q L + G P V + ELM + LP R D++ ++ Y Y P P L + AF G D + E +E W + TT + F + +FPG HFF+ H S+VL ++ ++ + Sbjct: 3 SQSKSWITYPQPNPRAKLRLFCFHYAGGGAVSFRNWSDALPSEVEVCPIELPGRGARLFEQPFTQLQPLIEAL-------------AVALVPHCT-----KPFAFLGHSMGALVGFELARSLRRK----GDRLPLYLLLSGHRAP-QLPDLDPPLHALPDAELLQELRRYNGTPEAVLQNAELMQLLLPTLRADFSVVETYRYQPEPPLDCPIFAFGGLQDWKVKPEDLEPWQQQTT--QAFTLQMFPGDHFFLHAHQSLVLRKVSDLLQQV 249
BLAST of EWM21085.1 vs. NCBI_GenBank
Match: gi|169809059|gb|ACA83971.1| (microcystin synthetase-associated thioesterase, partial [Planktothrix agardhii PCC 7811]) HSP 1 Score: 146.747 bits (369), Expect = 1.117e-38 Identity = 89/263 (33.84%), Postives = 130/263 (49.43%), Query Frame = 0 Query: 57 AKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTW--DLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPL-VLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIKEHTSMVLER 316 A W P PEAK R+ C +AGG ++I+R+W L S VE+ +ELPGRN+R++ETP L+ L A+ LP T KP FGHS G ++ LA+ LR+ PL + VSG + + A+ + +I+ L + G P V + ELM + LP R D++ ++ Y Y LP L + AF G D + + +E W + T F+V++FPG HFF+ S+VLER Sbjct: 14 ANSWVTYPKPNPEAKLRLFCFHYAGGGAAIFRSWIDSLPSTVEICPIELPGRNSRLRETPFTQMEPLIQALDRAI-------------LPHLT-----KPFAFFGHSMGGLVSFELARLLRKEYNQS------PLHLFVSGYRAPQIPDRTPQIHALPESELIKELRRYAGTPEAVLENAELMALLLPTLRADFSVVETYSYKDLPPLDCPITAFGGLEDLKPNALEIEAWWEQTN--SAFSVEMFPGDHFFLHSAKSLVLER 250
BLAST of EWM21085.1 vs. NCBI_GenBank
Match: gi|1127353427|gb|APR74830.1| (Malonyl CoA-acyl carrier protein transacylase [Minicystis rosea]) HSP 1 Score: 146.747 bits (369), Expect = 1.123e-38 Identity = 86/250 (34.40%), Postives = 125/250 (50.00%), Query Frame = 0 Query: 60 WFVCRAPRPEAKYRMLCLAWAGGNSSIYRTWD--LGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIK 307 W R PR +AK R+ C AGG ++ YR + L + +EV AV+LPGR R++ETP+ + L+ L + AP +P P FGHS GA+L LA+ LR R +P L + P A+SDDA+I +L +GG+ E+ A RELM + LP FR D + YV+ P L AF +D +A++ +E W + TT + F + +FPG HF+I+ Sbjct: 6 WLPYRRPRADAKARLFCFPHAGGGATAYRGFQEALPASIEVCAVQLPGRENRLRETPIASLAKLIPLLADGL---------APHLVP---------PFAFFGHSMGAVLAFELARTLRRR------GAPLPAHLFASACPAPHIPDDDASHALSDDALIDHLRALGGMREEILAHRELMEMILPVFRADAALTETYVHATEPPLDLPFTAFGASSDTKATRADLEAWREHTT--RGFTIALFPGDHFYIQ 229 The following BLAST results are available for this feature:
BLAST of EWM21085.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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