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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100041g24.3686.mrna |
Orig protein id | gnl|cribi|Naga_100041g24.3686 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
KK037254.1 | supercontig | KK037254.1:227795..231361 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna9584 ID=rna9584|Name=rna9584|organism=Nannochloropsis gaditana|type=mRNA|length=2392bp GGGGACTATGCCCGTACGACCAACCAGGAGACTATCGAAGCCATTCGCGT GCTCACAAACCTCCAACTTCTAATGCGCTCAAACCGTTTTCCGTCGCCCT ATCGTCCAATTAAATTAGGCGGTGGCGCGTCCTGACCTCACTCGAAGACG GCGAATTCAAAGCACTCCTAGTTCAGTCACGACGTCTCTCCTAGGCTGTG AAGTACTCTACTAGCCCGCAGCCCCCCGTTTGAATCTTAATCATGATCAG ATTCCAGAGCACATGCCGTGGGTTCCAAAGAATAGGAAGTGGTAGCCACA AAAGCACAGGAAGTGCTGTGCTGCTAGCTGTATTCGTGATAGCGGCCGAG GCTGCACTGTGCGCAGGAGAGACTACCGAGGGGAGCAGCAGTAACTTTGG TGGCGCGAGCGAATTGTCGCACAAGGTGGTAAGTCATCATTTTGTAGCAG GCATATTTTCCAGGTTCCATGCCTAATTTTAAATTGGTCGACGCTTGGGA TGGAGATGGAAGCATGTCACGTACTACCCTTTAGAACAACCGAGCTTTTT CTGTCGCCTTGACATTAGCTGCACTCACCTCCTCCCATCATTCTTACACG CGTATTACCTTTCATCGGCCAATACCCTCTCAGCCGCTGGCCAGCGCCCA CGGCCGCGAGCAGACGGCGGGCGTAGAGCTCTACCTCCTGGCCTCGAACT TCCTACTCTACACGGCGCTCGTGATCGTGGCCATCATGATCTCCAAGCTC TACCTAGAGGCCGAGCCTAATGCCTCCCCACGCTCCAGGGCCCGCCACTA CTCTTCGCACGACGTGCTAGAGCTCTTTGCGGGCAGCAGGCCCCCCTCCT CCTCCTCTTTCTCGCCCGCTGCGCCCATCCCGGTGGTCTCCCTCCCTATC GGCAAAGGCAAGAGCGGCTCAATCCTCAACTTTGCGGCCATGAGTCCCAA CCCTGACGCCTCAGCCCTAGGGGAGGGAGAGCTGCCCATCAGCCCGGGAC TGCGGACTAAGGGCGAGGTCCTGCGTACGCTCCTCTTCTGCACAGCGGGC CTTATCTGCTCCTTTCTTGTGTGGGGCATCCTGCAGGAGCGCATGCTGAC TATGCCATACCGGAACGGGGAATACTTCACGTACTCTTACGGCCTGGTTT TTACAAATCGGCTCTTCTCCCTGATCCTATCCTCCATCTTGGTCTGGATG TACGAGTGGGAATCTCTGACTTTGAGCTCGGCACCTCTCTACGAGTACTC CTTTCCCTCCGTGTCGAACATGCTTTCTTCCTGGTGCCAGTACGAGGCTC TTGCCTACGTGACCTTCCCCACGCAAACCCTGTCCAAGTCCTTCAAGCTC GTGCCGATCATGCTCATGGGACGTATGCTCACGAACAAGCGGTACCCGCT CTACGAGTACGCCACCGCCATCTCCATCGGCCTGGGCAACACCTTGTTCA TGATGGCCACAGAGAACCTGGAGCTGGGCGTCGACTCCTTCGGGCAGGTG GAGGACAAGAGCGGGACATGGTGTGGGGTCATGCTTCTGCTCCTCTTCCT GTTTTTTGACTCGTTCACATCTCAGTGGCAGTCGCGCATGTTCTCGAAAC ACGAGATCTCGCCGGTGATCATGATGTTCTACCTGAATGCCTTCTCCGTC GTCTTTTCCTTCATCACGCTCGTACACACGAGAGAGCTGACTCCCTTCTT CCACTTCATCTCCAAGCATCCATCCATTCATCTCCATTTCTGGCTTTTCT CTATTTGTTCAACCATCGGCCAGCTTTTCATCTTTTTGACTATCAAGACC TTCGGTCCAGTCGTTTTTGCCATTATCATGAGCACCCGAATTCTCCTCTC GATCGCCGCGTCCTGCTTTCTCTATGGACATCCAATACCGCCCCTCGGTT ATCTGGGTCTAGCTGTAGTGTTTTTTTCAATCGCATATCGCATCAAACGC AAGACCGCAGGCCAAAGGCTCGTGCAATGGGAAGGTATGGATGATGAAGA AGCACCATATCTTATGAAAGAGTTTCACGAACACCTGGACATGTAAATTT AATGGCTTTGGCAGCATCAGCAATAATCCGACACAATCTCGACCTGTTTA CCGACCAATATTGTTAAGTGTGGTCATTAAGGGGTCAAGCAGAGAAAGGC CATGATGAAAAAGAAGTTTCCATTACGTGTAGCTCCAGAATTGTGCTGGT CATGCTCAGTAGGAGCATAGTTATCCGCAGTTTACTACCTTTTCTCCTGA ACCCTTTTTTTGCAAAGCTATCCACGCCATAGCACTGTTATCCCAGCCTA GTAGATTTCTCAACCTGCCCTGACCCGGATGATATGGGCTCCATTTTGAA AAAGCCGTTACCCTGGCGGTTTCGTCTCAAAGAGCCGTTGGT back to topprotein sequence of rna9584 >rna9584-protein ID=rna9584-protein|Name=rna9584|organism=Nannochloropsis gaditana|type=polypeptide|length=1126bp MLRYGLLRKVGAASAAWVQRCSVGERATLRRGLRTGRALHRHSASIYSSG VIERARIPITMIARGFKYHETGWWEDHDSGGVTEAEPVEGNPEVYRSLLA YVSDARKEEIYRLHKLEPDIFDAEVLSYLFNLSRTRVAAIIQLKAAEVKR RLQGTLYTEEDDIFDGAPNSSPDKDTAERRKPGVGKSSGPSDPCDLLLLD EESGSETLEDLCRPPGWDPEDKEALFLQAALRQVQHVARLGLTGEEAAAA LKPFKEKIDSASLEELVTKLEEQMEKIARRTEEEMYETVHPYEEKGLDQV PDPFNGFRILKRREQAVMEDPDFLQYHAWMGLELERLELLLAHLQLQNQG GGVKGRHPATPYQRKELEHATRLYEERRRECAGMFARLRSVHEARLGHEL KGKAEGKEEEQNETGEKELERLVAEETSLLDDVRKRLAPRIVEMEELEEA RARVLREIQSLAAIRRRGLLVRGLKADDASERKEKLTEYMEMLLAEAQAA VREEEEESAVSAEDVQWEALQQHRRILRQDSVGQALYKEFGAEVAHAALE QEVVDAILGAREEIVSARPASETPSSRQQQDALKAVMATERESKEREAAM QNYVRSLWGGIRWHSSASDALEATASVSLQAFTRFVGDVHESSGLRGRVD PMEVAAELQGVLANSSSAVSALLSDMVSLAQEGEEGNVSRLAHKEIRAVE RGYQENVARELAALKEARVAALKASRGGGAKGGENEALRRYLVLAAVSSR LDAFDRVNQAVLSNLLPEVMRAFRGKQETVAAAYTLLVEEMYGGKAIGAT GVAEVAGLARRTEGWVESTLVKLLKGSWDEVEKGEIMAQVDVGALASRLL TQDCFYAGIRSSPGLKVLREELLHAARNLDTADVKAVESDFGLSVDTDEV RTMVAGALEKPLKQHIEANIAMADALRRKDAPIRDRARAAKALLDHLRLD VNYQEYAGPVRDRIVEEIEEDLLDTVYDMSDELGMELDPTLVDLKPREHY DIPSLKFRVLNDNEPAVSDRVRDGFIREGPVAEAKGAVNIPVWQPKGDLR DLTEPMDGKGQKGGVQQRRWKFAFKDASVPSAGRGAAKGGTVIRDKTGRL RAASPTEEQGRSWIRRSRKIDLRSDH back to topmRNA from alignment at KK037254.1:227795..231361+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna9584 ID=rna9584|Name=rna9584|organism=Nannochloropsis gaditana|type=mRNA|length=3567bp|location=Sequence derived from alignment at KK037254.1:227795..231361+ (Nannochloropsis gaditana) TTGATCTAATCAACATACTGTGAACTGCACGATAGGATGCTTCGCTATGG
CTTACTTCGCAAGGTAGGAGCAGCCTCGGCAGCGTGGGTACAAAGGTGCA
GCGTGGGTGAGCGGGCAACGCTGCGTCGGGGCTTGCGAACAGGAAGAGCA
TTGCACCGCCACTCTGCCTCGATTTACTCTTCAGGGGTGATCGAGAGAGC
TCGTATTCCAATAACCATGATTGCTCGGGGTTTCAAGTACCACGAAACGG
GTTGGTGGGAAGATCACGACAGCGGGGGagtgacggaggcggagccggtg
gagggaaaCCCAGAGGTGTATCGCTCCTTGTTGGCCTACGTTTCGGACGC
GCGGAAGGAAGAAATTTATCGTCTTCACAAGCTAGAACCTGACATATTCG
ATGCCGAGGTGCTCTCCTACTTATTTAACCTGAGCCGCACACGTGTGGCA
GCAATTATTCAGTTGAAGGCGGCGGAAGTCAAGAGGCGCTTGCAGGGTAC
CCTTTACACGGAAGAAGACGACATTTTTGACGGGGCTCCCAATTCGAGTC
CTGATAAAGATACGGCGGAACGAAGAAAACCGGGTGTGGGTAAGAGCTCG
GGGCCCTCGGACCCGTGCGATCTACTCCTGCTGGACGAGGAGTCGGGCTC
CGAGACGCTGGAAGACCTCTGCCGTCCCCCCGGGTGGGATCCTGAGGACA
AAGAAGCTCTCTTTCTGCAAGCTGCCCTCCGACAGGTCCAGCACGTGGCG
CGACTGGGCTtgacgggagaggaggcagcggcggcccTTAAACCCTTCAA
GGAAAAGATCGACAGCGCGTCGTTGGAAGAGCTGGTGACcaagctggagg
agcagaTGGAGAAGATCGCAAGGCGCACCGAAGAAGAGATGTACGAGACA
GTTCATCCCTATGAGGAAAAGGGTCTGGACCAGGTTCCGGACCCCTTCAA
CGGCTTTCGTATCCTGAAACGACGGGAGCaggcggtgatggaggacCCGG
ACTTCCTGCAGTATCATGCTTGGATGGGGCTAGAGCTCGAGcgcctcgag
ctcctcctcgcgcaccTTCAGCTCCAAAACCAGGGAGGCGGTGTGAAGGG
GCGCCACCCAGCCACGCCCTACCAGCGGAAGGAATTGGAGCATGCCACTC
GCCTGTACGAGGAGCGACGCCGAGAGTGCGCCGGCATGTTCGCGCGTCTG
CGGTCTGTGCACGAGGCCCGCCTGGGGCACGAgctgaaggggaaggcgga
gggcaaggaggaggagcagaatGAAacaggagagaaggagctcGAGAGGC
TGGTcgcggaggagacgagcTTGCTCGACGATGTTCGGAAGAGACTGGCC
CCAAGGAttgtggagatggaggaactggaggaggcgcgcgCCCGGGTACT
GCGAGAGATTCAGAGCTTGGCTGCCATTCGACGGCGAGGTCTTCTCGTGC
GCGGACTAAAGGCCGACGATGCAAGCGAGCGCAAGGAGAAGCTGACGGAG
TACATGGAGATGCTTCTAGCGGAGGCGCAGGCCGctgtgagggaggagga
ggaggagagcgccGTTTCCGCGGAAGATGTTCAGTGGGAAGCCCTGCAGC
AGCACCGACGGATCCTGCGACAGGACTCAGTAGGCCAGGCACTTTACAAG
GAATTCGGGGCAGAGGTGGCACACGCGGCTCTAGAGCAAGAAGTCGTGGA
CGCGATCCTAGGGGCGCGCGAGGAGATAGTCAGTGCCCGCCCCGCGTCCG
AGACCCCGAGTAgtcggcagcagcaggacGCGTTGAAGGCCGTTATGGCC
acggagagagagagcaaggagcgAGAGGCGGCGATGCAAAACTATGTCAG
AAGCTTGTGGGGGGGTATCCGTTGGCATTCCTCCGCGTCAGACGCTCTGG
AGGCGACAGCCTCTGTGAGCCTGCAGGCCTTCACGAGGTTCGTTGGAGAT
GTTCACGAATCGAGCGGTCTCCGCGGTCGCGTGGATCCGATGGAGGTGGC
CGCAGAACTTCAAGGTGTGCTGGCGAACTCCTCGTCAGCGGTCTCCGCCT
TGCTCTCGGACATGGTCAGTctggcgcaggagggagaggaggggaacgtA
TCCAGGCTTGCTCACAAGGAGATACGAGCTGTGGAGCGGGGCTACCAAGA
AAACGTCGCCCGGGAGTTGGCGGCCTTAAAGGAAGCTCGAGTCGCGGCTT
TAAAAGCCTcgcgggggggcggcgcgAAGGGCGGAGAGAACGAGGCGCTT
AGGCGGTACCTGGTCCTGGCGGCGGTTTCGAGCAGGCTGGATGCATTCGA
TCGCGTCAATCAAGCCGTTTTGTCCAACCTGCTGCCTGAAGTTATGCGCG
CCTTTAGGGGGAAACAGGAAACGGTAGCCGCGGCCTACACGCTACTTGTG
GAAGAGATGTATGGGGGTAAAGCCATCGGAGCGACAGGCGTAGCAGAGGT
CGCGGGTTTGGCCAGGCGTACGGAGGGATGGGTGGAGTCGACGCTCGTGA
AATTACTGAAAGGCAGCTgggacgaggtggagaagggtgAAATTATGGCT
CAAGTAGATGTGGGAGCGCTAGCGAGTCGTCTACTCACTCAAGATTGCTT
TTACGCCGGCATCCGTTCCTCGCCGGGTCTCAAAGTGCTCCGCGAAGAAC
TTCTGCACGCCGCAAGAAACCTGGACACGGCTGATGTCAAGGCTGTTGAA
AGCGATTTCGGGTTAAGTGTAGACACAGATGAAGTCCGGACAATGGTCGC
TGGTGCGTTGGAGAAACCTTTGAAGCAACACATAGAGGCAAACATAGCCA
TGGCAGATGCCCTGCGTCGTAAAGACGCGCCTATAAGAGACCGGGCAAGG
GCAGCAAAAGCCTTACTAGACCATTTGCGGCTGGACGTGAACTATCAGGA
GTATGCAGGACCAGTACGAGATCGCATCGTCGAGGAAATTGAAGAGGATT
TGCTGGACACAGTGTACGACATGAGCGACGAGCTGGGGATGGAGTTGGAT
CCCACCCTGGTGGATCTGAAGCCCCGAGAGCATTATGACATCCCCTCTCT
CAAGTTTCGCGTTCTGAATGACAACGAGCCTGCCGTTTCAGACAGGGTTC
GGGACGGCTTCATTCGGGAGGGGCCGGTCGCGGAAGCAAAAGGGGCGGTC
AACATTCCCGTCTGGCAGCCGAAGGGGGATCTCAGGGACCTCACAGAGCC
GATGGATGGTAAGGGCCAAAAGGGAGGCGTGCAGCAGCGGCGATGGAAGT
TTGCCTTCAAGGATGCCTCCGTTCCATCGGCTGGGAGGGGCGCCGCAAAA
GGAGGCACCGTGATCCGAGACAAGACTGGCCGCCTTCGCGCTGCATCGCC
gacggaggagcaagggCGCAGCTGGATCAGACGAAGTCGAAAGATAGACC
TGAGAAGTGATCATTGATAATGCAGTCTGTCATTGTTGAAGCTGAATTAA
CATGGACCAAACGCAAGACCCAGAGCCCTCGTTCGCATTAGTTTACAATT
ATATGTTCTTAATTCGTAAATTTTGCCACCACACTACAAGAATGGTCGAA
CATTGCTGCTCTTTACA back to topCoding sequence (CDS) from alignment at KK037254.1:227795..231361+ >rna9584 ID=rna9584|Name=rna9584|organism=Nannochloropsis gaditana|type=CDS|length=3381bp|location=Sequence derived from alignment at KK037254.1:227795..231361+ (Nannochloropsis gaditana) ATGCTTCGCTATGGCTTACTTCGCAAGGTAGGAGCAGCCTCGGCAGCGTG GGTACAAAGGTGCAGCGTGGGTGAGCGGGCAACGCTGCGTCGGGGCTTGC GAACAGGAAGAGCATTGCACCGCCACTCTGCCTCGATTTACTCTTCAGGG GTGATCGAGAGAGCTCGTATTCCAATAACCATGATTGCTCGGGGTTTCAA GTACCACGAAACGGGTTGGTGGGAAGATCACGACAGCGGGGGagtgacgg aggcggagccggtggagggaaaCCCAGAGGTGTATCGCTCCTTGTTGGCC TACGTTTCGGACGCGCGGAAGGAAGAAATTTATCGTCTTCACAAGCTAGA ACCTGACATATTCGATGCCGAGGTGCTCTCCTACTTATTTAACCTGAGCC GCACACGTGTGGCAGCAATTATTCAGTTGAAGGCGGCGGAAGTCAAGAGG CGCTTGCAGGGTACCCTTTACACGGAAGAAGACGACATTTTTGACGGGGC TCCCAATTCGAGTCCTGATAAAGATACGGCGGAACGAAGAAAACCGGGTG TGGGTAAGAGCTCGGGGCCCTCGGACCCGTGCGATCTACTCCTGCTGGAC GAGGAGTCGGGCTCCGAGACGCTGGAAGACCTCTGCCGTCCCCCCGGGTG GGATCCTGAGGACAAAGAAGCTCTCTTTCTGCAAGCTGCCCTCCGACAGG TCCAGCACGTGGCGCGACTGGGCTtgacgggagaggaggcagcggcggcc cTTAAACCCTTCAAGGAAAAGATCGACAGCGCGTCGTTGGAAGAGCTGGT GACcaagctggaggagcagaTGGAGAAGATCGCAAGGCGCACCGAAGAAG AGATGTACGAGACAGTTCATCCCTATGAGGAAAAGGGTCTGGACCAGGTT CCGGACCCCTTCAACGGCTTTCGTATCCTGAAACGACGGGAGCaggcggt gatggaggacCCGGACTTCCTGCAGTATCATGCTTGGATGGGGCTAGAGC TCGAGcgcctcgagctcctcctcgcgcaccTTCAGCTCCAAAACCAGGGA GGCGGTGTGAAGGGGCGCCACCCAGCCACGCCCTACCAGCGGAAGGAATT GGAGCATGCCACTCGCCTGTACGAGGAGCGACGCCGAGAGTGCGCCGGCA TGTTCGCGCGTCTGCGGTCTGTGCACGAGGCCCGCCTGGGGCACGAgctg aaggggaaggcggagggcaaggaggaggagcagaatGAAacaggagagaa ggagctcGAGAGGCTGGTcgcggaggagacgagcTTGCTCGACGATGTTC GGAAGAGACTGGCCCCAAGGAttgtggagatggaggaactggaggaggcg cgcgCCCGGGTACTGCGAGAGATTCAGAGCTTGGCTGCCATTCGACGGCG AGGTCTTCTCGTGCGCGGACTAAAGGCCGACGATGCAAGCGAGCGCAAGG AGAAGCTGACGGAGTACATGGAGATGCTTCTAGCGGAGGCGCAGGCCGct gtgagggaggaggaggaggagagcgccGTTTCCGCGGAAGATGTTCAGTG GGAAGCCCTGCAGCAGCACCGACGGATCCTGCGACAGGACTCAGTAGGCC AGGCACTTTACAAGGAATTCGGGGCAGAGGTGGCACACGCGGCTCTAGAG CAAGAAGTCGTGGACGCGATCCTAGGGGCGCGCGAGGAGATAGTCAGTGC CCGCCCCGCGTCCGAGACCCCGAGTAgtcggcagcagcaggacGCGTTGA AGGCCGTTATGGCCacggagagagagagcaaggagcgAGAGGCGGCGATG CAAAACTATGTCAGAAGCTTGTGGGGGGGTATCCGTTGGCATTCCTCCGC GTCAGACGCTCTGGAGGCGACAGCCTCTGTGAGCCTGCAGGCCTTCACGA GGTTCGTTGGAGATGTTCACGAATCGAGCGGTCTCCGCGGTCGCGTGGAT CCGATGGAGGTGGCCGCAGAACTTCAAGGTGTGCTGGCGAACTCCTCGTC AGCGGTCTCCGCCTTGCTCTCGGACATGGTCAGTctggcgcaggagggag aggaggggaacgtATCCAGGCTTGCTCACAAGGAGATACGAGCTGTGGAG CGGGGCTACCAAGAAAACGTCGCCCGGGAGTTGGCGGCCTTAAAGGAAGC TCGAGTCGCGGCTTTAAAAGCCTcgcgggggggcggcgcgAAGGGCGGAG AGAACGAGGCGCTTAGGCGGTACCTGGTCCTGGCGGCGGTTTCGAGCAGG CTGGATGCATTCGATCGCGTCAATCAAGCCGTTTTGTCCAACCTGCTGCC TGAAGTTATGCGCGCCTTTAGGGGGAAACAGGAAACGGTAGCCGCGGCCT ACACGCTACTTGTGGAAGAGATGTATGGGGGTAAAGCCATCGGAGCGACA GGCGTAGCAGAGGTCGCGGGTTTGGCCAGGCGTACGGAGGGATGGGTGGA GTCGACGCTCGTGAAATTACTGAAAGGCAGCTgggacgaggtggagaagg gtgAAATTATGGCTCAAGTAGATGTGGGAGCGCTAGCGAGTCGTCTACTC ACTCAAGATTGCTTTTACGCCGGCATCCGTTCCTCGCCGGGTCTCAAAGT GCTCCGCGAAGAACTTCTGCACGCCGCAAGAAACCTGGACACGGCTGATG TCAAGGCTGTTGAAAGCGATTTCGGGTTAAGTGTAGACACAGATGAAGTC CGGACAATGGTCGCTGGTGCGTTGGAGAAACCTTTGAAGCAACACATAGA GGCAAACATAGCCATGGCAGATGCCCTGCGTCGTAAAGACGCGCCTATAA GAGACCGGGCAAGGGCAGCAAAAGCCTTACTAGACCATTTGCGGCTGGAC GTGAACTATCAGGAGTATGCAGGACCAGTACGAGATCGCATCGTCGAGGA AATTGAAGAGGATTTGCTGGACACAGTGTACGACATGAGCGACGAGCTGG GGATGGAGTTGGATCCCACCCTGGTGGATCTGAAGCCCCGAGAGCATTAT GACATCCCCTCTCTCAAGTTTCGCGTTCTGAATGACAACGAGCCTGCCGT TTCAGACAGGGTTCGGGACGGCTTCATTCGGGAGGGGCCGGTCGCGGAAG CAAAAGGGGCGGTCAACATTCCCGTCTGGCAGCCGAAGGGGGATCTCAGG GACCTCACAGAGCCGATGGATGGTAAGGGCCAAAAGGGAGGCGTGCAGCA GCGGCGATGGAAGTTTGCCTTCAAGGATGCCTCCGTTCCATCGGCTGGGA GGGGCGCCGCAAAAGGAGGCACCGTGATCCGAGACAAGACTGGCCGCCTT CGCGCTGCATCGCCgacggaggagcaagggCGCAGCTGGATCAGACGAAG TCGAAAGATAGACCTGAGAAGTGATCATTGA back to top
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