rna9515, rna9515 (mRNA) Nannochloropsis gaditana

Overview
Namerna9515
Unique Namerna9515
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length882
Alignment locationKK037254.1:36003..37126 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100987g2.9727.mrna
Orig protein idgnl|cribi|Naga_100987g2.9727
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:36003..37126 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100987g2gene9236Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9515rna9515-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21189.1cds9484Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9515 ID=rna9515|Name=rna9515|organism=Nannochloropsis gaditana|type=mRNA|length=882bp
ATGGAAGACGGCACGGTAGGGGAATCCGAGGAGGAAGAAGGAGTGGCAGA
CGGCGATGAGGAAGACAGCGTCTTGGATTCTGAGGAGGAGGAGGAATTTG
AAGACCAAGGCTCCTCAAGCGACGAGAGCGAGGTCCTGGAGGCCCAAGCG
GAAGCCTCGGGGGGGGAAGACGGGGACACGGACGACGACGTCGAATACCT
GGAGAGCAGCGACGAGGGAGACAGAGGACGGGACGAAGCCTTGCGCGTGG
AGGAGGCCACGCCCCGACGTTGGGAACCCGCAGCGTCCCAAGCCCCCCTC
CGGGCGCTCCTGCGGCAAGGAATTCCCAAGGGGGTGGAAGGGACTTCCAC
GGGGAGGAAGAGGGCGGAGGAAATCGAGGTGGAGCGGGCCAGTGGGCGCT
TGGCGGTGGCTGCGGCCATGCACGCGGACGACTTGTCGAGCGACGACGAA
GGGGAAGGGGAAGGCAGGGTCTGGAATGCGATTGGGAGGGTGCCCTTGCA
TTGGTACGACGAGTACGAGCACATGGGCTACGACCTGCAGGGGAAGAAGG
TCATGAGGGGCCGGAAAGGCGACGGCTTGGACGCAGCCTTGGCCAGTCGG
GACGACCCTAACTACGGCCGCACCGTCTACGACGCAGTGAACGACAGGCA
CGTGGTCCTCACCGACCGAGACCTGGAGATCATCCGTCGGCTGCAGAAGG
GCGCATTCGCTCATCCAGAGCACGAGGCGTATCCGCCCCAAGTCGACGTG
TACTGTGACGAAGAGAACATTTTTGGACCCTCCGCCCCAGAGCCCAAGCG
GAGGTTCGTTCCATCCAAGTGGGAGCTGATGAAGGTCACGCAGATGGTGA
AAGCGATCAAGGAAGGGCGCATGGTGCCCTGA
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protein sequence of rna9515

>rna9515-protein ID=rna9515-protein|Name=rna9515|organism=Nannochloropsis gaditana|type=polypeptide|length=258bp
MASGSVSHARRGFSRFLWPLGFAAFWAAQLYLSWKVFSAFTDKDAPSTLL
AVPESYGEESGRKMGMWADRTRLWNQGKRYEALSLSGDMLRGQNLPTRAV
PPLPIPSPGPDESRAQTGKKKYRVAMLLPFIGPIFPSWFRTFAASLAARD
DGSVPMDWFIFHEGARVPLGYHPPTNVHLIDLRPEGGLARRIVRRGRGVL
FPESGREQGKEKGFDEEEAVAILREGLKRKPALLIQFKVRCLEGRGREGG
REGGRRRE
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mRNA from alignment at KK037254.1:36003..37126+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9515 ID=rna9515|Name=rna9515|organism=Nannochloropsis gaditana|type=mRNA|length=1124bp|location=Sequence derived from alignment at KK037254.1:36003..37126+ (Nannochloropsis gaditana)
aggaaggaagtTGTGTCCGTGATATGGCGTCGGGGTCTGTCTCACACGCA
CGCCGGGGGTTCAGTCGCTTTCTTTGGCCATTAGGTTTTGCAGCTTTTTG
GGCAGCCCAACTGTACCTCTCTTGGAAGGTCTTCTCAGCTTTTACGGATA
AAGATGCACCTTCAACGTTGCTTGCAGTCCCAGAGAGCTATGGCGAGGAA
AGTGGACGGAAAATGGGAATGTGGGCGGATAGGACGAGGTTATGGAATCA
AGGGAAGCGATATGAAGCCCTCTCTCTCAGGTAAGTCCGTCTCACCGGCA
GGATTGcgcagggaggcggggaaaatgTCCTCGAGAGGACGCACGGATCA
TAGGGACCTTAGAGTGCTAATGATTTGGTGTCATCCTTTATGTCAGGAGC
GGTGATATGCTTCGCGGGCAGAACCTCCCCACCAGGgccgttccccccct
tcccatcccatcACCCGGGCCGGACGAGAGCCGAGCCCAGACCGGAAAGA
AAAAGTATAGGGTCGCcatgcttcttcctttcatcgggcccatttttcct
tcctggtTCCGGACgttcgccgcctccttggcggccAGGGACGACGGGAG
CGTGCCGATGGACTGGTTCATCTTCCACGAAGGAGCCCGGTgagtgctgg
aggaggaggggggaagggggaggaatggtggGAGGTCACGATGGGGGGAT
AGGAGGGAAACTTAAGTAGCCTGCCAAACGAGTAAGCTATTGCCTTGTGA
GGGGAGGTGATTGGAGACAGTGCTGCCGACGACAGCGATGGTCCCCGCCC
TTCGCTCCCATCCTCAACCCTCTTTtcctggcccctccccctcgcagCGT
ACCTCTCGGCTACCATCCCCCTACCAACGTGCACCTGATCGACCTGCGCC
CTGAAGGCGGGCTGGCCCGTCGGATCGTCcgccggggccgtggggTCCTG
TTTCCggagagcgggcgggagcaagggaaggagaaagggttcgatgagga
agaggcggtggccaTTTTACGGGAGGGCTTGAAGCGGAAGCCTGCCTTGT
TGATTCAATTCAAGGTACGGTGTctggaggggagagggagggagggaggg
agggagggagggaggaggcgggag
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Coding sequence (CDS) from alignment at KK037254.1:36003..37126+

>rna9515 ID=rna9515|Name=rna9515|organism=Nannochloropsis gaditana|type=CDS|length=2322bp|location=Sequence derived from alignment at KK037254.1:36003..37126+ (Nannochloropsis gaditana)
ATGGCGTCGGGGTCTGTCTCACACGCACGCCGGGGGTTCAGTCGCTTTCT
TTGGCCATTAGGTTTTGCAGCTTTTTGGGCAGCCCAACTGTACCTCTCTT
GGAAGGTCTTCTCAGCTTTTACGGATAAAGATGCACCTTCAACGTTGCTT
GCAGTCCCAGAGAGCTATGGCGAGGAAAGTGGACGGAAAATGGGAATGTG
GGCGGATAGGACGAGGTTATGGAATCAAGGGAAGCGATATGAAGCCCTCT
CTCTCAGCGGTGATATGCTTCGCGGGCAGAACCTCCCCACCAGGgccgtt
cccccccttcccatcccatcACCCGGGCCGGACGAGAGCCGAGCCCAGAC
CGGAAAGAAAAAGTATAGGGTCGCcatgcttcttcctttcatcgggccca
tttttccttcctggtTCCGGACgttcgccgcctccttggcggccAGGGAC
GACGGGAGCGTGCCGATGGACTGGTTCATCTTCCACGAAGGAGCCCGCGT
ACCTCTCGGCTACCATCCCCCTACCAACGTGCACCTGATCGACCTGCGCC
CTGAAGGCGGGCTGGCCCGTCGGATCGTCcgccggggccgtggggTCCTG
TTTCCggagagcgggcgggagcaagggaaggagaaagggttcgatgagga
agaggcggtggccaTTTTACGGGAGGGCTTGAAGCGGAAGCCTGCCTTGT
TGATTCAATTCAAGGTACGGTGTctggaggggagagggagggagggaggg
agggagggagggaggaggcgggagATGGCGTCGGGGTCTGTCTCACACGC
ACGCCGGGGGTTCAGTCGCTTTCTTTGGCCATTAGGTTTTGCAGCTTTTT
GGGCAGCCCAACTGTACCTCTCTTGGAAGGTCTTCTCAGCTTTTACGGAT
AAAGATGCACCTTCAACGTTGCTTGCAGTCCCAGAGAGCTATGGCGAGGA
AAGTGGACGGAAAATGGGAATGTGGGCGGATAGGACGAGGTTATGGAATC
AAGGGAAGCGATATGAAGCCCTCTCTCTCAGCGGTGATATGCTTCGCGGG
CAGAACCTCCCCACCAGGgccgttcccccccttcccatcccatcACCCGG
GCCGGACGAGAGCCGAGCCCAGACCGGAAAGAAAAAGTATAGGGTCGCca
tgcttcttcctttcatcgggcccatttttccttcctggtTCCGGACgttc
gccgcctccttggcggccAGGGACGACGGGAGCGTGCCGATGGACTGGTT
CATCTTCCACGAAGGAGCCCGCGTACCTCTCGGCTACCATCCCCCTACCA
ACGTGCACCTGATCGACCTGCGCCCTGAAGGCGGGCTGGCCCGTCGGATC
GTCcgccggggccgtggggTCCTGTTTCCggagagcgggcgggagcaagg
gaaggagaaagggttcgatgaggaagaggcggtggccaTTTTACGGGAGG
GCTTGAAGCGGAAGCCTGCCTTGTTGATTCAATTCAAGGTACGGTGTctg
gaggggagagggagggagggagggagggagggagggaggaggcgggagAT
GGCGTCGGGGTCTGTCTCACACGCACGCCGGGGGTTCAGTCGCTTTCTTT
GGCCATTAGGTTTTGCAGCTTTTTGGGCAGCCCAACTGTACCTCTCTTGG
AAGGTCTTCTCAGCTTTTACGGATAAAGATGCACCTTCAACGTTGCTTGC
AGTCCCAGAGAGCTATGGCGAGGAAAGTGGACGGAAAATGGGAATGTGGG
CGGATAGGACGAGGTTATGGAATCAAGGGAAGCGATATGAAGCCCTCTCT
CTCAGCGGTGATATGCTTCGCGGGCAGAACCTCCCCACCAGGgccgttcc
cccccttcccatcccatcACCCGGGCCGGACGAGAGCCGAGCCCAGACCG
GAAAGAAAAAGTATAGGGTCGCcatgcttcttcctttcatcgggcccatt
tttccttcctggtTCCGGACgttcgccgcctccttggcggccAGGGACGA
CGGGAGCGTGCCGATGGACTGGTTCATCTTCCACGAAGGAGCCCGCGTAC
CTCTCGGCTACCATCCCCCTACCAACGTGCACCTGATCGACCTGCGCCCT
GAAGGCGGGCTGGCCCGTCGGATCGTCcgccggggccgtggggTCCTGTT
TCCggagagcgggcgggagcaagggaaggagaaagggttcgatgaggaag
aggcggtggccaTTTTACGGGAGGGCTTGAAGCGGAAGCCTGCCTTGTTG
ATTCAATTCAAGGTACGGTGTctggaggggagagggagggagggagggag
ggagggagggaggaggcgggag
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Synonyms
Publications