EWM21193.1, cds9481 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21193.1 vs. NCBI_GenBank
Match: gi|585101277|gb|EWM21193.1| (hypothetical protein Naga_100474g4 [Nannochloropsis gaditana]) HSP 1 Score: 493.041 bits (1268), Expect = 1.961e-176 Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0 Query: 1 MKTAFFGLPAAALLFLGTMPQAFSAFVSSDVYANNDLTGDERVCKNRQFKNFLKCAHAEKGNASTWPDLSSCQSLLGDCRGWAYDGVNDGAITGNTEAYLGIAGISKNARYFGYYAYGNADPKKYVPFDCNYVSRLYKKVGRCILGQSTVVGTIDFTDLVTDCVEITLSRAEAAFVFSQTNFAFGMPVPVGVVKYFYMAPFLRLSDDINYENCPILEGHFKKGSPIVRASKGGAVPTA 238 MKTAFFGLPAAALLFLGTMPQAFSAFVSSDVYANNDLTGDERVCKNRQFKNFLKCAHAEKGNASTWPDLSSCQSLLGDCRGWAYDGVNDGAITGNTEAYLGIAGISKNARYFGYYAYGNADPKKYVPFDCNYVSRLYKKVGRCILGQSTVVGTIDFTDLVTDCVEITLSRAEAAFVFSQTNFAFGMPVPVGVVKYFYMAPFLRLSDDINYENCPILEGHFKKGSPIVRASKGGAVPTA Sbjct: 1 MKTAFFGLPAAALLFLGTMPQAFSAFVSSDVYANNDLTGDERVCKNRQFKNFLKCAHAEKGNASTWPDLSSCQSLLGDCRGWAYDGVNDGAITGNTEAYLGIAGISKNARYFGYYAYGNADPKKYVPFDCNYVSRLYKKVGRCILGQSTVVGTIDFTDLVTDCVEITLSRAEAAFVFSQTNFAFGMPVPVGVVKYFYMAPFLRLSDDINYENCPILEGHFKKGSPIVRASKGGAVPTA 238
BLAST of EWM21193.1 vs. NCBI_GenBank
Match: gi|553188521|ref|XP_005854813.1| (hypothetical protein NGA_0414800 [Nannochloropsis gaditana CCMP526] >gi|422294249|gb|EKU21549.1| hypothetical protein NGA_0414800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 424.476 bits (1090), Expect = 2.204e-149 Identity = 211/238 (88.66%), Postives = 211/238 (88.66%), Query Frame = 0 Query: 1 MKTAFFGLPAAALLFLGTMPQAFSAFVSSDVYANNDLTGDERVCKNRQFKNFLKCAHAEKGNASTWPDLSSCQSLLGDCRGWAYDGVNDGAITGNTEAYLGIAGISKNARYFGYYAYGNADPKKYVPFDCNYVSRLYKKVGRCILGQSTVVGTIDFTDLVTDCVEITLSRAEAAFVFSQTNFAFGMPVPVGVVKYFYMAPFLRLSDDINYENCPILEGHFKKGSPIVRASKGGAVPTA 238 MKTAFFGLPAAALLFLGTMPQAFSAFVSSDVYANNDLTGDERVCKNRQFKNFLKCAHAEKGNASTWPDLSSCQSLLGDCRGWAYDGVNDGAITGNTEAYLGIAGISKNARYFGYYAYGNADPKKYVPFDCNYVSRLYKK ITLSRAEAAFVFSQTNFAFGMPVPVGVVKYFYM PFLRLSDDINYENCPILEGHFKKGSPIVRASKGGAVPTA Sbjct: 1 MKTAFFGLPAAALLFLGTMPQAFSAFVSSDVYANNDLTGDERVCKNRQFKNFLKCAHAEKGNASTWPDLSSCQSLLGDCRGWAYDGVNDGAITGNTEAYLGIAGISKNARYFGYYAYGNADPKKYVPFDCNYVSRLYKK--------------------------ITLSRAEAAFVFSQTNFAFGMPVPVGVVKYFYMVPFLRLSDDINYENCPILEGHFKKGSPIVRASKGGAVPTA 212
BLAST of EWM21193.1 vs. NCBI_GenBank
Match: gi|585113117|gb|EWM30454.1| (hypothetical protein Naga_100100g12 [Nannochloropsis gaditana]) HSP 1 Score: 249.98 bits (637), Expect = 2.269e-80 Identity = 109/212 (51.42%), Postives = 155/212 (73.11%), Query Frame = 0 Query: 25 AFVSSDVYANNDLTGDERVCKNRQFKNFLKCAHAEKGNASTWPDLSSCQSLLGDCRGWAYDGVNDGAITGNTEAYLGIAGISKNARYFGYYAYGNADPKKYVPFDCNYVSRLYKKVGRCILGQSTVVGTIDFTDLVTDCVEITLSRAEAAFVFSQTNFAFGMPVPVGVVKYFYMAPFLRLSDDINYENCPILEGHFKKGSPIVRASKGGAVP 236 AF+SS+V +NDL +++CK R KNFLKCA+ +KG+++TWPDLSSC+S+LGDCRGW Y GVN + G + YL AG+S+ A + GYYAYG+ DPKKY FDCNYVS+LY+ VG C+LGQ+TV G++ F D+V +C+E +LS ++AF+++QT F P+ G + YFY+ P L + D ++ E+CP+LEG+ K + +VR KG A+P Sbjct: 21 AFISSNVTNSNDLAAGQKICKPRVLKNFLKCAYVQKGDSATWPDLSSCESVLGDCRGWVYHGVNVDELVGRS--YLSAAGVSRKANFLGYYAYGDEDPKKYTRFDCNYVSKLYQDVGHCVLGQTTVQGSLTFEDVVDECIESSLSPVQSAFLWAQTEFLRSAPLDFGKITYFYIIPQLLMGDGLSSESCPVLEGYLKSQTTLVRRRKGSAIP 230
BLAST of EWM21193.1 vs. NCBI_GenBank
Match: gi|585109819|gb|EWM27552.1| (hypothetical protein Naga_100015g58 [Nannochloropsis gaditana]) HSP 1 Score: 247.669 bits (631), Expect = 1.436e-79 Identity = 119/222 (53.60%), Postives = 159/222 (71.62%), Query Frame = 0 Query: 16 LGTMPQAFSAFVSSDVYANNDLTGDERVCKNRQFKNFLKCAHAEKGNASTWPDLSSCQSLLGDCRGWAYDGVNDGAITGNTEAYLGIAGISKNARYFGYYAYGNADPKKYVPFDCNYVSRLYKKVGRCILGQSTVV--GTIDFTDLVTDCVEITLSRAEAAFVFSQTNFAFGMPVPVGVVKYFYMAPFLRLSDDINYENCPILEGHFKK-GSPIVRASKGGA 234 L +P A SA S+V N L ++VC RQ K+FL CA+AEKG+AS WP LS C+ LG CRGWAYDG++ +T E +LG+AG+SKNARYFGYYAYG+ DPKKYVPF+CNYVS+L++KVGRCILG++T G++ F +V +C+ L AE +FVF+QT++ P+ G+V YFY++PFL L++ E+CP++EG+FKK GSP VR K GA Sbjct: 13 LVALPWATSA---SNVSDANPLAAGQKVCSKRQLKSFLGCAYAEKGSASIWPSLSPCEGQLGKCRGWAYDGLDAQIVTNEDEPFLGVAGLSKNARYFGYYAYGDLDPKKYVPFNCNYVSKLFQKVGRCILGKTTTASQGSLFFERVVVECIRSVLDPAEQSFVFTQTDYTRSAPMEPGLVTYFYISPFLLLANKEATEDCPVVEGYFKKNGSPSVRILKAGA 231 The following BLAST results are available for this feature:
BLAST of EWM21193.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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