EWM21196.1, cds9477 (CDS) Nannochloropsis gaditana

Overview
NameEWM21196.1
Unique Namecds9477
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037254.1:22081..22229 +
Alignment locationKK037254.1:22566..22638 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21196.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101635g1.3095.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:22081..22229 +
KK037254.1supercontigKK037254.1:22566..22638 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21196.1 vs. NCBI_GenBank
Match: gi|585101281|gb|EWM21196.1| (hypothetical protein Naga_101635g1 [Nannochloropsis gaditana])

HSP 1 Score: 149.058 bits (375), Expect = 1.356e-45
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 
Query:    1 MDNGYCQTQKETCDGRGEACGCHPTVADPVHCVLGIDIHGRRRRVFGQKIRGRREQERAHQYGGKFEEIGRGD 73
            MDNGYCQTQKETCDGRGEACGCHPTVADPVHCVLGIDIHGRRRRVFGQKIRGRREQERAHQYGGKFEEIGRGD
Sbjct:    1 MDNGYCQTQKETCDGRGEACGCHPTVADPVHCVLGIDIHGRRRRVFGQKIRGRREQERAHQYGGKFEEIGRGD 73
The following BLAST results are available for this feature:
BLAST of EWM21196.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585101281|gb|EWM21196.1|1.356e-45100.00hypothetical protein Naga_101635g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9508rna9508Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications