rna9508, rna9508 (mRNA) Nannochloropsis gaditana

Overview
Namerna9508
Unique Namerna9508
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1034
Alignment locationKK037254.1:22081..22638 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101635g1.3095.mrna
Orig protein idgnl|cribi|Naga_101635g1.3095
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037254.1supercontigKK037254.1:22081..22638 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101635g1gene9229Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna9508rna9508-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM21196.1cds9477Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna9508 ID=rna9508|Name=rna9508|organism=Nannochloropsis gaditana|type=mRNA|length=1034bp
CACAGGACGAGCGAAAATAGTTTCCTGGTAACATGACATTGGGTGCCGTG
GTCGCACGGCGTGGATCGGTGGGGTGGCGATTGACACGTCGCACCATCCT
CCCCCTCACCTCCCCTCCATTTCAGCACGGGGGGAGACAAGTAGTGAGGC
GGCCGCTCACACTTTTAAATCCAGAAACACCACAAGAATTAGCGTCAATA
CCACCGCAGCACCAGGAAGAAGGCATCGGGAAGGCTACATCCCCGCGACA
GAGGAAACGCAGGTCGAGAAATCTCGCGAGGGGCTTCTCGCCGCTTGCTC
CCCCGAAGGGAGAGATGCAATCTCCCCTCGGTGAGTCCCACGCCCGTCGG
CACGAGTTACACCGCCCACAGCGGCCACAAAAGCAAGGAAAGGCAGGGCA
GGAAGGAGAGAAGGCGCCCGGACAAGCTGTTCGACCCTGGCATCCGCCAG
GTGTACTGACGAGCTCGGAGGGGGAGGAGGGAATGGCTGGCTTGCTCCTG
GTCGACACGGTGTTGGACAAATATGTGCCCCTTTTTGACATCCCAAGGTA
GGTTTGGACCAGGAATTTTCGTCTTTTGCGGACCTTTCTTTTCGAATAAC
TTCCTTCCCGTCCTCCCCTCCTTAGTCTCCTCCGTCTCGTCCAGCAAGCC
TCCCTCCCCTTGAATCTGGACATTTTCAAGCGGACGATCGCCGCCTGCGT
CCGAAACAAAGATGCGGTCAAGGCGCTGGGGCTTGTGGTGGAGATGCGGG
AGCGGGGCATCGTTCCTGATTTGGAGGTGTACGAGACGATAACGGGGGGA
TTCACCCAACAGGGGGAGCCGGACGTGGTGCTGGCCGTGCTGCGAGGGCT
GGAGGGAGGGAGGGAGGGGGGTAGGAAGGGAGGGAGGGAGAAAGGAAGGG
AGGGAGGTGGTGTGGTCCCCTCCGTGCAGATGTACAATCACTTGATTCAA
GCTTACGTGACGGCGGGGAGGAGGGAGGAGGCGGAGCGAGTGTTCCAGGC
AATGAAGGCAGGAGGGCGGGAAGGAGGGCGGGAA
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protein sequence of rna9508

>rna9508-protein ID=rna9508-protein|Name=rna9508|organism=Nannochloropsis gaditana|type=polypeptide|length=73bp
MDNGYCQTQKETCDGRGEACGCHPTVADPVHCVLGIDIHGRRRRVFGQKI
RGRREQERAHQYGGKFEEIGRGD
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mRNA from alignment at KK037254.1:22081..22638+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna9508 ID=rna9508|Name=rna9508|organism=Nannochloropsis gaditana|type=mRNA|length=558bp|location=Sequence derived from alignment at KK037254.1:22081..22638+ (Nannochloropsis gaditana)
ATGGACAACGGTTACTGCCAAACCCAAAAAGAAACCTGcgacgggagggg cgaggcctGCGGGTGTCACCCAACCGTGGCAGACCCGGTCCACTGCGTCC TCGGCATCGACATacacgggaggaggcgccgcgTCTTCGGCCAAAAAATG TACGTGGGAGCGTGCTCGGActtgggaggtggagaggctGGTTTTGAGCC TCGACGGGTTTagaaggggcaggaggaaggaggaaaggacagcAGGAGGA GTTACTCGTACGACGCCGTGTATGCTTTATTTTTGAGCCTGCCGCGGCGA CCATGAGAGGAAGTAGGATGGAAGGAGCACGTTGGGCCTCAGATAATTGT TGTCCTGTGGGAGACACTTCcggtggcgatggcccctgcctcctcctctc tccctcccccgcaatCATCCTTGGGACATCGACGTTGCTcatccttgtct tcccttcttttcggTTCCCGACCCGACCTGCTCAGACGCGGCCGGAGAGA ACAAGAGCGCGCACACCAATACGGGGGCAAATTTGAGGaaattggaagag gagactgA
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Coding sequence (CDS) from alignment at KK037254.1:22081..22638+

>rna9508 ID=rna9508|Name=rna9508|organism=Nannochloropsis gaditana|type=CDS|length=444bp|location=Sequence derived from alignment at KK037254.1:22081..22638+ (Nannochloropsis gaditana)
ATGGACAACGGTTACTGCCAAACCCAAAAAGAAACCTGcgacgggagggg
cgaggcctGCGGGTGTCACCCAACCGTGGCAGACCCGGTCCACTGCGTCC
TCGGCATCGACATacacgggaggaggcgccgcgTCTTCGGCCAAAAAATA
CGCGGCCGGAGAGAACAAGAGCGCGCACACCAATACGGGGGCAAATTTGA
GGaaattggaagaggagactgAATGGACAACGGTTACTGCCAAACCCAAA
AAGAAACCTGcgacgggaggggcgaggcctGCGGGTGTCACCCAACCGTG
GCAGACCCGGTCCACTGCGTCCTCGGCATCGACATacacgggaggaggcg
ccgcgTCTTCGGCCAAAAAATACGCGGCCGGAGAGAACAAGAGCGCGCAC
ACCAATACGGGGGCAAATTTGAGGaaattggaagaggagactgA
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Synonyms
Publications