EWM21231.1, cds9442 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21231.1 vs. NCBI_GenBank
Match: gi|585101346|gb|EWM21231.1| (beta-lactamase [Nannochloropsis gaditana]) HSP 1 Score: 665.611 bits (1716), Expect = 0.000e+0 Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0
Query: 1 MARRNFLCLLHLLIPTIARAQGDLEGIWQGATTAAKAWLDSGNSLPFPVAFSPESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKVYDPITGTNVALERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKNDILNPDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVYQRNMTDGTIHRPPPDPHNIQLVDYTKRPKHDEIRTDAS 321
MARRNFLCLLHLLIPTIARAQGDLEGIWQGATTAAKAWLDSGNSLPFPVAFSPESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKVYDPITGTNVALERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKNDILNPDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVYQRNMTDGTIHRPPPDPHNIQLVDYTKRPKHDEIRTDAS
Sbjct: 1 MARRNFLCLLHLLIPTIARAQGDLEGIWQGATTAAKAWLDSGNSLPFPVAFSPESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKVYDPITGTNVALERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKNDILNPDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVYQRNMTDGTIHRPPPDPHNIQLVDYTKRPKHDEIRTDAS 321
BLAST of EWM21231.1 vs. NCBI_GenBank
Match: gi|1147711501|gb|AQQ75272.1| (hypothetical protein, partial [uncultured bacterium]) HSP 1 Score: 198.749 bits (504), Expect = 5.171e-58 Identity = 115/272 (42.28%), Postives = 162/272 (59.56%), Query Frame = 0
Query: 31 ATTAAKAWLDSGNSLPFPVAFSPESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKV----YDPITGTNVAL-----ERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKNDILNPDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVYQRNMTDGTIH 293
A + A S N LP A +PE V M+S L + + V + +I GA + + G+I +T+G A+VET +P+R DTI RI+S SKPI++ A + L +EG NDPV+ Y+PEFA M+V DP TG N+ L +RPIT+ LL HT+GLTYG +T VD+ Y K IL+ D +LA + ++K+PL +PG++W Y +S DVL + +++G D+FLQ R+ PL M DTGFYVP +LA +Y R DG I
Sbjct: 21 ARPSGAASGKSDNELP---AVAPEEVGMASSRLAHIRSVMNRHVAEKRIPGAIGLIARRGKIAYQETFGMADVETGKPMRIDTIHRIYSMSKPITSVAVMMLYEEGKFQLNDPVAKYLPEFAKMQVGIEEKDPQTG-NLTLKTAPAKRPITVRDLLRHTAGLTYGVFGDTLVDREYRKAKILS-DLNLAEFVTNLSKIPLLYEPGSRWHYSVSVDVLGRLVEVLSGKSFDQFLQERIFAPLDMRDTGFYVPADKKDRLAKLY-RPTRDGKIQ 286
BLAST of EWM21231.1 vs. NCBI_GenBank
Match: gi|1147711509|gb|AQQ75278.1| (hypothetical protein, partial [uncultured bacterium]) HSP 1 Score: 197.208 bits (500), Expect = 1.688e-57 Identity = 119/300 (39.67%), Postives = 170/300 (56.67%), Query Frame = 0
Query: 3 RRNFLCLLHLLIPTIARAQGDLEGIWQGATTAAKAWLDSGNSLPFPVAFSPESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKV----YDPITGTNVAL-----ERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKNDILNPDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVYQRNMTDGTIH 293
RR + LL +L A + A + A S N LP A +PE V M+S L + + V + +I GA + + G+I +T+G A+VE +P+R DTI RI+S SKPI++ A + L +EG NDPV+ Y+PEFA M+V DP TG N+ L +RPIT+ LL HT+GLTYG +T VD+ Y K IL+ D +LA + ++K+PL +PG++W Y +S DVL + +++G D+FLQ R+ PL M DTGFYVP +LA +Y R DG +
Sbjct: 2 RRLLISLLIVLFAMSA---------YPAARPSGAASGKSDNELP---AVAPEEVGMASSRLAHIRSVMNRHVAEKRIPGAIGLIARRGKIAYQETFGMADVEAGKPMRIDTIHRIYSMSKPITSVAVMMLYEEGKFQLNDPVAKYLPEFAKMQVGIEEKDPQTG-NLTLKTAPAKRPITVRDLLRHTAGLTYGVFGDTLVDREYRKAKILS-DLNLAEFVTNLSKIPLLYEPGSRWHYSVSVDVLGRLVEVLSGKSFDQFLQERIFAPLDMRDTGFYVPADKKDRLAKLY-RPTRDGKVQ 286
BLAST of EWM21231.1 vs. NCBI_GenBank
Match: gi|1120301449|ref|WP_073167123.1| (hypothetical protein [Tangfeifania diversioriginum] >gi|1110272850|emb|SHI85094.1| CubicO group peptidase, beta-lactamase class C family [Tangfeifania diversioriginum]) HSP 1 Score: 196.438 bits (498), Expect = 3.164e-56 Identity = 96/221 (43.44%), Postives = 140/221 (63.35%), Query Frame = 0
Query: 63 LEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKVYDPITGTNVALERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKNDILNPDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVY 283
LE A ++ ++ K+ G S + KDGE V + +G+A++E ++P+ +TIFRIFS +KPI+ A +TL DEG +D VS YIPEFA KVY+ T T + +TI HLLTHTSG+ YG+ N +VD LY + + + K+K +A LPL QPGT W+YGLS DV + +++G+P DE+L+ ++ EPLGM DTGFY P +L+ ++
Sbjct: 37 LELAGEKMQEYIDSGKLAGISALIYKDGETVYRENFGFADLEAQKPMEDNTIFRIFSMTKPITAVALMTLYDEGKFKLDDKVSTYIPEFAATKVYNSETKTLEPQQEEMTIRHLLTHTSGIPYGWDQNAYVDSLYRVSGAGGWEGTIGEKVKIMASLPLKHQPGTTWEYGLSIDVAGYLVEVLSGMPFDEYLKTQIFEPLGMDDTGFYAPKEKHDRLSALH 257
BLAST of EWM21231.1 vs. NCBI_GenBank
Match: gi|528059751|gb|EPX64533.1| (Beta-lactamase class C protein [Cystobacter fuscus DSM 2262]) HSP 1 Score: 193.741 bits (491), Expect = 4.353e-55 Identity = 100/250 (40.00%), Postives = 148/250 (59.20%), Query Frame = 0
Query: 43 NSLPFPVAFSPESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKVY------DPITGTNVALERPITIWHLLTHTSGLTYGFMDNTHV-DQLYNKNDILNPDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVYQR 285
+S+ F V P V + + L T + V+D ++ G V + G++ + ++G A+ E P+R DT++RI+S +KP+++ A + L +EG +DPVS ++PEFA +VY P+T V PI +WHLLTHT+GLTYGF THV D+LY + DLAT+++ AKLPL QPG +W Y ++TDVL +V+G +D F R+L+PLGMTDT F+ P H+LA +Y R
Sbjct: 4 SSMGFGVNVDPGEVGLDARRLRRIDTHFSRYVDDGRLAGWQVMVSRRGKVAHLTSHGLADKEAGVPVRTDTLWRIYSMTKPLTSVAAMMLWEEGAFELSDPVSRWLPEFAEPRVYTGGPAARPVT---VPATEPIRVWHLLTHTAGLTYGF-HRTHVTDELYRLQEADMGSADLATRVRGWAKLPLAFQPGAEWNYSVATDVLGRFVEVVSGQSLDTFFSERILKPLGMTDTAFWCPETQRHRLAALYTR 249
BLAST of EWM21231.1 vs. NCBI_GenBank
Match: gi|759716927|ref|WP_043428358.1| (serine hydrolase [Cystobacter fuscus]) HSP 1 Score: 191.815 bits (486), Expect = 2.053e-54 Identity = 99/248 (39.92%), Postives = 146/248 (58.87%), Query Frame = 0
Query: 45 LPFPVAFSPESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKVY------DPITGTNVALERPITIWHLLTHTSGLTYGFMDNTHV-DQLYNKNDILNPDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVYQR 285
+ F V P V + + L T + V+D ++ G V + G++ + ++G A+ E P+R DT++RI+S +KP+++ A + L +EG +DPVS ++PEFA +VY P+T V PI +WHLLTHT+GLTYGF THV D+LY + DLAT+++ AKLPL QPG +W Y ++TDVL +V+G +D F R+L+PLGMTDT F+ P H+LA +Y R
Sbjct: 1 MGFGVNVDPGEVGLDARRLRRIDTHFSRYVDDGRLAGWQVMVSRRGKVAHLTSHGLADKEAGVPVRTDTLWRIYSMTKPLTSVAAMMLWEEGAFELSDPVSRWLPEFAEPRVYTGGPAARPVT---VPATEPIRVWHLLTHTAGLTYGF-HRTHVTDELYRLQEADMGSADLATRVRGWAKLPLAFQPGAEWNYSVATDVLGRFVEVVSGQSLDTFFSERILKPLGMTDTAFWCPETQRHRLAALYTR 244
BLAST of EWM21231.1 vs. NCBI_GenBank
Match: gi|219950521|gb|ACL60913.1| (beta-lactamase [Methylobacterium nodulans ORS 2060]) HSP 1 Score: 190.274 bits (482), Expect = 7.748e-54 Identity = 100/239 (41.84%), Postives = 147/239 (61.51%), Query Frame = 0
Query: 53 PESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKVYDPITG------TNVALERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKN--DILNPDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVY 283
PE+V +S+ LE + VE K+ G S +V + GE+V + +G A++ E+P+ DTI R++S +KP+++ A + L +EG +DPV+ ++PEF M+V +TG +V ER ITI LLTHTSGLTYGFM++T VD +Y D + LA + R A LPL QPG +W Y ++TDVL + ++V+G+P DEFL+RR++ PLGM DT F+VP + A Y
Sbjct: 8 PEAVGLSAERLERIDPWMRRYVEAGKLAGLSVTVARRGEVVFSRAHGLADLARERPMADDTIVRVYSMTKPLTSVAVMMLYEEGRFQLDDPVTRFLPEFRDMRV---LTGGSRKKWESVPAERDITIRDLLTHTSGLTYGFMESTLVDAMYRDEGIDFQTAETSLADVVARAASLPLLSQPGAEWNYSIATDVLGHLVAVVSGVPFDEFLRRRIIHPLGMVDTDFHVPAEKLPRFASNY 243
BLAST of EWM21231.1 vs. NCBI_GenBank
Match: gi|1194598589|ref|WP_085933834.1| (serine hydrolase [Enhydrobacter aerosaccus] >gi|1152239870|emb|SJZ74418.1| CubicO group peptidase, beta-lactamase class C family [Enhydrobacter aerosaccus]) HSP 1 Score: 189.889 bits (481), Expect = 1.192e-53 Identity = 96/239 (40.17%), Postives = 143/239 (59.83%), Query Frame = 0
Query: 52 SPESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKVYDPITGTN---VALERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKNDILN---PDEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVYQ 284
+PE V +S+ L + V+ ++ G VM+ GE+ + YG A+VE +P+R DTIFRI+S +KP+++ A + L +EG +DP+S ++P F TM+V+ + V ER IT LLTHTSGLTYGFM++T +D LY D ++ D LA + ++A PL CQPG W Y +STDVL + +V+G P +++L R+++PLGM DT F+VP +LA Y
Sbjct: 8 APEQVGLSAARLARVSHWMKGWVDSGRLPGMVTCVMRKGELAFAEAYGKADVERGKPMRPDTIFRIYSMTKPLTSTAIMMLYEEGRFQLDDPISRFLPAFKTMRVFAGGSRGKIDTVPAEREITFRDLLTHTSGLTYGFMESTIIDALYRGKDGVDFQTADSSLAELVDKLATFPLLCQPGKAWNYSVSTDVLGRLVEVVSGEPFEKYLVERVIKPLGMVDTNFHVPKEKHERLAANYS 246
BLAST of EWM21231.1 vs. NCBI_GenBank
Match: gi|992051790|ref|WP_061027396.1| (serine hydrolase [Bradyrhizobium sp. CCH5-F6]) HSP 1 Score: 190.274 bits (482), Expect = 1.212e-53 Identity = 100/255 (39.22%), Postives = 154/255 (60.39%), Query Frame = 0
Query: 48 PVAFSPESVEMSSVHLEEAHTRIAS-LVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKVYDPITGTNVAL-----ERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKNDILNPDED--LATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVYQRNMTDG-TIH 293
P SPESV MS L+ + + ++ + G V + G+IV +G+A++E + P++ DTI+RI+S +KP+++ AF+ L++EGLV+ ++PV+ YIPE+ + V+ + GT A RP+ I LL HTSGLTYGF ++VD Y I ++ L T I+ +AK+PL PG W Y +STDV+ + ++G+P ++FL++R+LEPLGMTDT F+VP AH+ A Y + G T H
Sbjct: 4 PTPASPESVGMSKAALDRVDAHLKNRYIDAGRFPGTQLLVYRRGKIVHNSVHGFADIERKVPVKDDTIYRIYSMTKPLTSVAFMMLVEEGLVAIDEPVAKYIPEWKDLGVF--VAGTYPAFLTRPPSRPMLIVDLLRHTSGLTYGFQQRSNVDAAYRSEKIGEVEKSGTLQTMIEGLAKIPLEFSPGESWNYSVSTDVIGYLVGKISGMPFEQFLKQRILEPLGMTDTDFHVPASKAHRFAACYSADPGGGMTFH 256
BLAST of EWM21231.1 vs. NCBI_GenBank
Match: gi|472338620|dbj|BAN08436.1| (hypothetical protein [uncultured bacterium]) HSP 1 Score: 191.045 bits (484), Expect = 1.448e-53 Identity = 106/249 (42.57%), Postives = 146/249 (58.63%), Query Frame = 0
Query: 45 LPFPVAFSPESVEMSSVHLEEAHTRIASLVEDSKIGGASFSVMKDGEIVTMQTYGYANVETEQPIRADTIFRIFSQSKPISTAAFLTLIDEGLVSYNDPVSLYIPEFATMKV----YDPITGTN----VALERPITIWHLLTHTSGLTYGFMDNTHVDQLYNKNDILNP--DEDLATKIKRVAKLPLTCQPGTKWQYGLSTDVLLLIASLVTGLPIDEFLQRRLLEPLGMTDTGFYVPLYNAHKLAIVY 283
LP PE V +++ L + V + KI GA + + G+I +T+G A+VE +P+R DTI RI+S SKPI++ A + L +EG NDPV+ Y+PEFA M+V DP TG V +RPITI LL HTSGLTYG +T VD+ Y K D++LA + ++A+LPL +PGT+W Y LS DVL + +++G D+FLQ R+ PL M DTGFYVP +LA +Y
Sbjct: 36 LPVAAPEEPEEVGLANSRLAHIRAAMNRYVAEKKIPGAIGLIARRGKIAYQETFGMADVEAGKPMRLDTIHRIYSMSKPITSVAVMMLYEEGRFQLNDPVAKYLPEFAKMQVGVEEKDPQTGQPVLKLVPAKRPITIRDLLRHTSGLTYGVFGDTLVDREYRKTKGTKGVMDQNLAHFVTQLARLPLLYEPGTRWNYSLSVDVLGRLVEVLSGKSFDQFLQERIFAPLDMRDTGFYVPASKKDRLAQLY 284 The following BLAST results are available for this feature:
BLAST of EWM21231.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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