EWM21269.1, cds9403 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21269.1 vs. NCBI_GenBank
Match: gi|585101423|gb|EWM21269.1| (glycoprotein 3-alpha-l-fucosyltransferase a [Nannochloropsis gaditana]) HSP 1 Score: 784.252 bits (2024), Expect = 0.000e+0 Identity = 376/376 (100.00%), Postives = 376/376 (100.00%), Query Frame = 0 Query: 1 MRAQENPCRLFLCVPQAPLPAVLVVVKTMPCIFSGVLAAFTRSPPHCRPSPPLPASSFLFPHPSNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQPDIHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFLTEPFTVATLHATLLALYGSEHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376 MRAQENPCRLFLCVPQAPLPAVLVVVKTMPCIFSGVLAAFTRSPPHCRPSPPLPASSFLFPHPSNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQPDIHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFLTEPFTVATLHATLLALYGSEHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV Sbjct: 1 MRAQENPCRLFLCVPQAPLPAVLVVVKTMPCIFSGVLAAFTRSPPHCRPSPPLPASSFLFPHPSNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQPDIHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFLTEPFTVATLHATLLALYGSEHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376
BLAST of EWM21269.1 vs. NCBI_GenBank
Match: gi|545360017|ref|XP_005645422.1| (hypothetical protein COCSUDRAFT_37671 [Coccomyxa subellipsoidea C-169] >gi|384247391|gb|EIE20878.1| hypothetical protein COCSUDRAFT_37671 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 238.424 bits (607), Expect = 3.877e-71 Identity = 137/329 (41.64%), Postives = 189/329 (57.45%), Query Frame = 0 Query: 51 PPLPASSFLFPHPSNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQPDIH-KDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFLTEP-FTVATLHATLLALYG-SEHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376 P +P + + SNC A SFRL+A+ N TVHSYGRCL+N K D L KF+LAFENS+E+DY+TEKY QAL G+VP+VIGA NI DY + NS++ +E++ +P VAA+MQ L+ + AYD MLAWK GP D+FLAL+D+ V C LC+ LA R+R E A++ + PC+CR G V+HHL VRER FE R +FL TVA LHA + +G + P+W RP ++ + + + ++I++VY G T + ALYG+ + D + V NPC ++EV FV Sbjct: 133 PLVPKEADVVAFISNCGAKSFRLQALEALSA-NFTVHSYGRCLHNVDTRDPKADVLRRYKFTLAFENSQELDYITEKYIQALEAGSVPIVIGATNIADYEVAPNSMLVLESMEDIPAVAARMQQLLRNKTAYDEMLAWKEIGPQDKFLALLDLSVVHSSCSLCIQLATRIRTAE-----EAAQQLQRQPPCSCRRAPGG------AVVHHLLVRERGRFESRDVFLDGGNLTVAGLHAAINQAFGRAGQVPIWQSHRPDFKGGAREIGKFNTLIKLRIYRVYQVGQTQRAALYGE--------ASLDTDLKVAGIVSGNPCAKLEVVFV 441
BLAST of EWM21269.1 vs. NCBI_GenBank
Match: gi|719969937|ref|XP_010269886.1| (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like isoform X1 [Nelumbo nucifera]) HSP 1 Score: 234.958 bits (598), Expect = 4.986e-69 Identity = 131/317 (41.32%), Postives = 186/317 (58.68%), Query Frame = 0 Query: 64 SNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQP-DIHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGY-RRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFL-TEPFTVATLHATLLALY-GSEHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376 SNC +++FRLEA+ +K N+ + SYG C N+ + K + L KFSLAFENS E DYVTEK+FQ+L GA+PVV+GAPNI ++APS S++HI+ L+ +P +A M+ L + AY+ L WK GPSD F ALVD+ V CRLC+YLA ++R E + G+ +RPC C E I+H+YVRER FE S+FL + T+ L + +LA + S H P+W ++RP K +KI+++YP G+T ++ALY F G D LR++V+ +PC + EV FV Sbjct: 230 SNCRSHNFRLEALEGLEKENIKIDSYGICHRNRDGSVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGAIPVVVGAPNIQEFAPSTGSVLHIKELSDIPSIAKAMKYLAENPDAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIYLASKIRESE-------ERNPGFQKRPCKCTRGLE--------TIYHIYVRERGRFEMDSIFLRSVNLTLNALESAVLAKFKSSNHVPIWKKQRPESIKGD----------ELKIYRIYPVGMTQRQALY-----TFKFNG----DSDLRKYVESHPCPKFEVIFV 512
BLAST of EWM21269.1 vs. NCBI_GenBank
Match: gi|302754078|ref|XP_002960463.1| (fucosyltransferase [Selaginella moellendorffii] >gi|300171402|gb|EFJ38002.1| fucosyltransferase [Selaginella moellendorffii]) HSP 1 Score: 233.802 bits (595), Expect = 9.854e-69 Identity = 134/319 (42.01%), Postives = 186/319 (58.31%), Query Frame = 0 Query: 64 SNCHANSFRLEAISFFQKHNVTVHSYGRCLNN-QPDIHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRV---RRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFL-TEPFTVATLHATLLALYGSE-HRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376 SNC ++FRLEAI+ Q + V V SYG CL N P + K D L H KFSLAFENS E DYVTEK++Q+L G+VPVVIGAPNI ++APS NSI++++++ + VA QM+ L + AY+ L WK GP+D F AL+D+ V CRLC+++A + + EAF+ R + RPC C GS HLYVRER F S+FL ++ +VA L A +++ + S+ H P+W RP K A P+K+H+VYP G+T +EAL+ + D+ L + NPC ++EV FV Sbjct: 212 SNCGGHNFRLEAITKLQGYGVAVDSYGSCLTNVHPAVEKVDALRHYKFSLAFENSNEEDYVTEKFWQSLEAGSVPVVIGAPNIQNFAPSPNSILYLKSIKDVQAVAKQMKYLARNATAYNETLRWKFEGPTDSFKALIDMAAVHSSCRLCIHVATAIHQKQEQEAFRSRNAS------RPCKCSV-------GSTTTF-HLYVRERGRFHLESIFLRSDNLSVAALEAAIISKFSSKNHVPIWNAARPEMLK---------AKGPLKVHRVYPVGLTQREALFSW----------QFTDEDLVNHIDANPCAKLEVIFV 497
BLAST of EWM21269.1 vs. NCBI_GenBank
Match: gi|641840787|gb|KDO59704.1| (hypothetical protein CISIN_1g038682mg, partial [Citrus sinensis]) HSP 1 Score: 230.335 bits (586), Expect = 1.033e-68 Identity = 135/331 (40.79%), Postives = 188/331 (56.80%), Query Frame = 0 Query: 49 PSPPLPASSFLFPHPSNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQPD-IHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFL-TEPFTVATLHATLLALYGS-EHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376 P P S+ SNC A +FRL+A+ +K NV + SYG C N+ + K + L KFSLAFENS E DYVTEK+FQAL G+VPVV+GAPNI D+APS SI+HI + VA M+ L + AY+ L+WK GPSD F ALVD+ V CRLC+YLA ++ ++R + +RPC C E +HHLYVRER F+ S+FL + T+ L + +LA + S +H P+W ++RP KS G ++ KI++++P G+T ++ALY F G D L+R ++ +PC + EV FV Sbjct: 84 PVQPKTESALAAAFISNCGARNFRLQALEALEKENVKIDSYGGCHRNRDGRVEKVETLKRYKFSLAFENSNEEDYVTEKFFQALVAGSVPVVVGAPNIQDFAPSPKSILHIREREDVKSVAKTMKYLAENPEAYNQSLSWKYEGPSDSFKALVDMAAVHSSCRLCIYLATKI------QEREETNPAFRKRPCKCTRGSE--------TVHHLYVRERGRFKMVSIFLRSGSLTLKALESAVLAKFKSLKHVPIWKQERP----KSIRGEDEL-----KIYRIHPVGLTQRQALY-----EFKFNG----DDDLKRHIESSPCAKFEVIFV 382
BLAST of EWM21269.1 vs. NCBI_GenBank
Match: gi|659112246|ref|XP_008456133.1| (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Cucumis melo]) HSP 1 Score: 233.417 bits (594), Expect = 1.834e-68 Identity = 132/321 (41.12%), Postives = 185/321 (57.63%), Query Frame = 0 Query: 64 SNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQ--PDIHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRV----RRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFL-TEPFTVATLHATLLALYGS-EHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376 SNC A +FRLEA+ +K N+T+ SYG C N+ ++K + L KFSLAFENS E DYVTEK+FQ+L GA+PVVIGAPNI D+APS S++HI L+ + VA M+ L A+ A++ L WK GPSD F AL D+G V CRLC+++A + +G AFK+ RPC C E +HHLYVRER F S+FL + TV L + +++ + S +H P+W ++RP K + ++++K+YP G+T ++ALY F G D RR+V+ NPC ++E FV Sbjct: 230 SNCGARNFRLEALEALEKLNITIDSYGSCHRNRDGSTVNKLEALKRYKFSLAFENSNEEDYVTEKFFQSLVAGAIPVVIGAPNIQDFAPSPASLLHIGELSDVESVANSMKYLAANPEAFNNSLRWKYEGPSDSFKALFDMGAVHSSCRLCIHVATGIHETEEKGLAFKN----------RPCKCTRGSE--------TVHHLYVRERGRFNSESIFLRSSNLTVEGLASAVISKFNSLKHEPIWKQERPKSLKGGDE---------LRLYKIYPVGLTQRQALY-----TFRFKG----DSGFRRYVEDNPCAKLEAIFV 514
BLAST of EWM21269.1 vs. NCBI_GenBank
Match: gi|1040896812|ref|XP_017256161.1| (PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like isoform X3 [Daucus carota subsp. sativus]) HSP 1 Score: 231.106 bits (588), Expect = 2.072e-68 Identity = 127/316 (40.19%), Postives = 184/316 (58.23%), Query Frame = 0 Query: 64 SNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQPD-IHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFL-TEPFTVATLHATLLALYGS-EHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376 SNC A +FRL+A+ +K N+ + SYG C N+ + K L KFSLAFENS E DYVTEKYFQ+L G++PVV+GAPNI +++PS N+I+HI+ L +P V+ M+ L AY+ L WK GPSD F ALVD+ V CRLC+YLA R+R + + D +RPC C E ++H+YVRER FE S+FL + T+ L + + + + S +H P+W +RP + + + +K++++YP G+T ++ALY FS G D LR+ +++NPC + EV FV Sbjct: 158 SNCAARNFRLQALEGLEKENIKIDSYGGCHRNRDGRVDKVQALKRYKFSLAFENSNEEDYVTEKYFQSLVAGSIPVVVGAPNIQEFSPSSNAILHIKELKDIPSVSKSMRYLADHPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLCIYLATRIRESD------EKSLDSSKRPCKCTRGSE--------TVYHVYVRERGRFEMVSIFLRSSNLTLKALESAVQSKFESLKHVPIWKDERPESIRGTDE---------LKVYRIYPLGLTQRQALY-----TFSFKG----DNELRKHLEKNPCAKFEVIFV 441
BLAST of EWM21269.1 vs. NCBI_GenBank
Match: gi|586642191|ref|XP_006826237.1| (putative fucosyltransferase-like protein [Amborella trichopoda] >gi|548830481|gb|ERM93474.1| hypothetical protein AMTR_s00132p00113370 [Amborella trichopoda]) HSP 1 Score: 231.876 bits (590), Expect = 5.001e-68 Identity = 132/326 (40.49%), Postives = 190/326 (58.28%), Query Frame = 0 Query: 54 PASSFLFPHPSNCHANSFRLEAISFFQKHNVTVHSYGRC-LNNQPDIHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFL-TEPFTVATLHATLLALYGS-EHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376 PA++F+ SNC A +FRLEA+ +K N+ + SYG C N+ + K L KFSLAFENS E DYVTEK+FQ+L G +PVV+GAPNI D+AP+ SI+HI+ + +P VA + L ++ A++ L WK GPSD F ALVD+ V CRLC++LA ++R + + ++ + +RPC C S +HHL+VRER FE S+FL + T+ L + +LA + S H P+W RPS K D +KI+++YP G+T ++ALY FS G D L+ +++ NPC ++EV FV Sbjct: 213 PAAAFI----SNCGARNFRLEALELLEKMNIQIDSYGGCHRNHDGRVDKVKALKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIQDFAPAPGSILHIKEVDDVPSVAKNITYLASNPVAFNNSLRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATQIR-----EKKERSNPNFQKRPCNCTR--------SGVTVHHLFVRERGRFEMESIFLSSSSLTLQALESAVLAKFKSLNHVPIWKGDRPSVIKGGDD---------LKIYRIYPLGMTQRQALY-----TFSFKG----DGDLQYYIESNPCAKLEVIFV 503
BLAST of EWM21269.1 vs. NCBI_GenBank
Match: gi|1201316285|gb|OVA15676.1| (Glycosyl transferase [Macleaya cordata]) HSP 1 Score: 233.032 bits (593), Expect = 6.420e-68 Identity = 135/332 (40.66%), Postives = 190/332 (57.23%), Query Frame = 0 Query: 49 PSPPLPASSFLFPHPSNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQPD--IHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFL-TEPFTVATLHATLLALYGS-EHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYGQIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376 P P ++ SNC A +FRL+A+ +K NV + SYG C N+ + K D L H KFSLAFENS E DYVTEK+FQ+L G+VPVV+GAPNILD+APS S++HI+ L +P VA M+ L + AY+ + WK GPSD F ALVD+ V CRLC++LA ++ E + K +RPC C E ++HLYVRER F+ S+FL + T+ L + +LA + S H P+W ++RP R + D +K++++YP G+T ++ALY F G D LR ++++NPC + EV FV Sbjct: 249 PLQPKTEAALAAAFISNCGARNFRLQALEMLEKSNVKIDSYGGCHRNRDGRAVDKVDALKHYKFSLAFENSNEEDYVTEKFFQSLVAGSVPVVVGAPNILDFAPSPGSVLHIKELDDVPSVAKTMKYLAENPDAYNQTVRWKYDGPSDSFKALVDMAAVHSSCRLCIHLATKIWETEERRPGLK------KRPCKCTRGLE--------TVYHLYVRERGRFQMDSIFLRSGNVTLEALESVVLAKFKSLNHVPIWKQERPE-RIRGGD--------ELKVYRIYPVGMTQRQALY-----TFRFKG----DSDLRSYLERNPCAKFEVIFV 548
BLAST of EWM21269.1 vs. NCBI_GenBank
Match: gi|1147613923|ref|XP_020110975.1| (glycoprotein 3-alpha-L-fucosyltransferase A-like [Ananas comosus]) HSP 1 Score: 231.106 bits (588), Expect = 6.894e-68 Identity = 129/332 (38.86%), Postives = 191/332 (57.53%), Query Frame = 0 Query: 49 PSPPLPASSFLFPHPSNCHANSFRLEAISFFQKHNVTVHSYGRCLNNQPD-IHKDDRLPHVKFSLAFENSEEVDYVTEKYFQALNFGAVPVVIGAPNILDYAPSENSIIHIENLAALPRVAAQMQALMADDHAYDAMLAWKARGPSDQFLALVDVGTVAPECRLCLYLADRVRRGEAFKDRAKAKEDGYRRPCACRPQEEGGEGGSNGVIHHLYVRERFTFEYRSLFL-TEPFTVATLHATLLALYGS-EHRPVWTRKRPSYRKKSPDGSWDMAYVPIKIHKVYPAGITTKEALYG-QIPDAFSVVGNRTMDQALRRWVKQNPCGEIEVTFV 376 P P ++ SNC A +FRL+A+ ++ + + SYG C N+ + K + L KFSLAFENS E DYVTEK+FQ+L G+VPVV+GAPNI D+AP+ SI+HI+ L+ + +A M+ L AD AY+ + WK GPSD F ALVD+ V CRLC++LA ++R E + AK + RPC+C + G ++HL+VRER FE S+FL ++ TV L +L + S + P+W +RP+ + + +KI+++YP G+T ++ALY + D D L+R++K NPC ++EV FV Sbjct: 191 PMQPKTEAALAAAFISNCGARNFRLQALEMLEQMGIKIDSYGACHRNRDGRVDKVEALKKYKFSLAFENSNEEDYVTEKFFQSLVAGSVPVVVGAPNIQDFAPAPGSILHIKELSDVSSIAQTMKHLAADPDAYNRTMRWKFEGPSDSFKALVDMAAVHSSCRLCIHLATKIREKE--EKTAKFQN----RPCSC--------SSNKGTVYHLFVRERGRFEMESIFLRSDKLTVEALEFAVLEKFRSLNYVPIWKNERPASIRGGDE---------LKIYRIYPVGLTQRQALYSFKFKD----------DADLKRYIKNNPCTKLEVIFV 489 The following BLAST results are available for this feature:
BLAST of EWM21269.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|