EWM21304.1, cds9368 (CDS) Nannochloropsis gaditana

Overview
NameEWM21304.1
Unique Namecds9368
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037253.1:178281..178471 -
Alignment locationKK037253.1:178054..178141 -
Alignment locationKK037253.1:177861..177934 -
Alignment locationKK037253.1:177535..177626 -
Alignment locationKK037253.1:177074..177400 -
Alignment locationKK037253.1:176783..176868 -
Alignment locationKK037253.1:176491..176613 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21304.1
ProductDeoxyUTP pyrophosphatase, dUTPase subfamily
Orig transcript idgnl|cribi|Naga_100350g4.4390.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037253.1supercontigKK037253.1:178281..178471 -
KK037253.1supercontigKK037253.1:178054..178141 -
KK037253.1supercontigKK037253.1:177861..177934 -
KK037253.1supercontigKK037253.1:177535..177626 -
KK037253.1supercontigKK037253.1:177074..177400 -
KK037253.1supercontigKK037253.1:176783..176868 -
KK037253.1supercontigKK037253.1:176491..176613 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0009056catabolic process
GO:0046080dUTP metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016787hydrolase activity
GO:0004170dUTP diphosphatase activity
Vocabulary: INTERPRO
TermDefinition
IPR008180dUTPase/dCTP_deaminase
IPR008181dUTPase_1
IPR029054dUTPase-like
Homology
BLAST of EWM21304.1 vs. NCBI_GenBank
Match: gi|585101483|gb|EWM21304.1| (DeoxyUTP pyrophosphatase, dUTPase subfamily [Nannochloropsis gaditana])

HSP 1 Score: 668.307 bits (1723), Expect = 0.000e+0
Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
Query:    1 MPVGIFWSSSLSTAVCKKAVTALSFRSSPSVPCASCFSVLAFPTAFRAPRLQHLFLPTLLFTIRFSVPTNPIFPPSFRSLCAMSLPRMSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQGQLAEREEGGNGEGKRMRVVEGATSVPTGAQLLLMLKEVADSGEDKDWIKSLKPLALAGDTRMYAAWGAYQCNKDMSDLKETLRLITPSEQ 326
            MPVGIFWSSSLSTAVCKKAVTALSFRSSPSVPCASCFSVLAFPTAFRAPRLQHLFLPTLLFTIRFSVPTNPIFPPSFRSLCAMSLPRMSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQGQLAEREEGGNGEGKRMRVVEGATSVPTGAQLLLMLKEVADSGEDKDWIKSLKPLALAGDTRMYAAWGAYQCNKDMSDLKETLRLITPSEQ
Sbjct:    1 MPVGIFWSSSLSTAVCKKAVTALSFRSSPSVPCASCFSVLAFPTAFRAPRLQHLFLPTLLFTIRFSVPTNPIFPPSFRSLCAMSLPRMSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQGQLAEREEGGNGEGKRMRVVEGATSVPTGAQLLLMLKEVADSGEDKDWIKSLKPLALAGDTRMYAAWGAYQCNKDMSDLKETLRLITPSEQ 326          
BLAST of EWM21304.1 vs. NCBI_GenBank
Match: gi|298715640|emb|CBJ28166.1| (deoxyuridine 5'-triphosphate nucleotidohydrolase [Ectocarpus siliculosus])

HSP 1 Score: 234.958 bits (598), Expect = 1.130e-72
Identity = 120/168 (71.43%), Postives = 136/168 (80.95%), Query Frame = 0
Query:   88 MSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQGQLAEREEGGNGEGKRMRVV 255
            M ET+QVK+LS++A++PVRGSE AAG+DLASA +  VPA  +ALVKTDLSIAIPPNTYARIAPRSGLA KK IDVGAGVVDYDYRGPVGVVLFNHG+EDF V +GDRVAQLILERI MA   ++EE  EL ET RG GGFGSTGV  QG L       NG  K+++VV
Sbjct:   36 MGETMQVKKLSENAIMPVRGSEHAAGFDLASAYEATVPAGRQALVKTDLSIAIPPNTYARIAPRSGLAVKKMIDVGAGVVDYDYRGPVGVVLFNHGSEDFKVQKGDRVAQLILERICMA---DIEEVTELSETTRGSGGFGSTGV-EQGALQSSSTVANG-AKKIKVV 198          
BLAST of EWM21304.1 vs. NCBI_GenBank
Match: gi|308813425|ref|XP_003084019.1| (putative dUTP pyrophosphatase (ISS) [Ostreococcus tauri] >gi|116055901|emb|CAL57986.1| DeoxyUTP pyrophosphatase [Ostreococcus tauri])

HSP 1 Score: 208.379 bits (529), Expect = 6.053e-64
Identity = 107/159 (67.30%), Postives = 123/159 (77.36%), Query Frame = 0
Query:   88 MSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQGQLAEREEGGN 246
            M+  L+VK+LS+HA +PVRGS  AAGYDL+SA D VVPA+GK LVKTD+S+AIP  TYAR+APRSGLAWK  IDVGAGVVDYDYRG VGV+LFNHG  DF V +GDRVAQLILE+I    VVE E   EL +T RG GGFGSTGV  +    ERE G +
Sbjct:    1 MATALRVKKLSEHATVPVRGSSGAAGYDLSSAYDYVVPARGKELVKTDISVAIPEGTYARVAPRSGLAWKSFIDVGAGVVDYDYRGNVGVILFNHGENDFVVKKGDRVAQLILEQIVTPDVVECE---ELDDTTRGAGGFGSTGVAKR----ERENGAD 152          
BLAST of EWM21304.1 vs. NCBI_GenBank
Match: gi|145355634|ref|XP_001422063.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144582302|gb|ABP00357.1| predicted protein [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 207.223 bits (526), Expect = 1.608e-63
Identity = 106/144 (73.61%), Postives = 116/144 (80.56%), Query Frame = 0
Query:   89 SETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGV 232
            S  L+VKRLS  A +P RGSE AAGYDLASA D VVPA+GK LVKTDLSIAIP  TYAR+APRSGLAWKK IDVGAGVVDYDYRG VGV+LFNHG EDF V +GDRVAQLILE+I    VVE +   +L +T RG GGFGSTGV
Sbjct:    3 SAALRVKRLSDDATMPTRGSEGAAGYDLASAHDCVVPARGKELVKTDLSIAIPLGTYARVAPRSGLAWKKFIDVGAGVVDYDYRGNVGVILFNHGDEDFEVKKGDRVAQLILEQILTPEVVECD---DLDDTARGAGGFGSTGV 143          
BLAST of EWM21304.1 vs. NCBI_GenBank
Match: gi|1149600100|gb|OON07523.1| (deoxyuridine 5'-triphosphate nucleotidohydrolase [Batrachochytrium salamandrivorans])

HSP 1 Score: 205.682 bits (522), Expect = 1.188e-62
Identity = 103/147 (70.07%), Postives = 118/147 (80.27%), Query Frame = 0
Query:   86 PRMSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGV 232
            P +++ L VKRLS+HA LP RGS  AAGYDL SA D V+PA G+ +V TDLSIA+PPNTY R+APRSGLA K  IDVGAGVVD DYRGP+GVVLFN GT DF V RGDR+AQLI+ERI+M  VVEVE   +L  T+RGQGGFGSTGV
Sbjct:   27 PSLADCLCVKRLSEHAQLPKRGSAEAAGYDLCSAHDAVIPALGRGVVPTDLSIALPPNTYGRVAPRSGLAVKHFIDVGAGVVDRDYRGPLGVVLFNFGTSDFQVKRGDRIAQLIIERIAMVDVVEVE---DLDNTERGQGGFGSTGV 170          
BLAST of EWM21304.1 vs. NCBI_GenBank
Match: gi|669152922|ref|XP_008612023.1| (dUTP pyrophosphatase [Saprolegnia diclina VS20] >gi|530736375|gb|EQC34617.1| dUTP pyrophosphatase [Saprolegnia diclina VS20])

HSP 1 Score: 204.142 bits (518), Expect = 2.366e-61
Identity = 115/213 (53.99%), Postives = 139/213 (65.26%), Query Frame = 0
Query:   90 ETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQGQLAEREEGGNGEGKRMRVVEGATSVPTGAQLLLMLKEVADSGED--KDWIKSLKPLALAGDTRMYA 300
            ETL VK+LS  AVLP RGS  AAG+DLASA + V+PA GKALVKTD++IAIP   YAR+APRSGL+WK H+DVGAGV+D DYRG VGVVLFNH  EDF V  GDR+AQLILERI   A  +V+E  EL +T RG+GGFGSTGV                 KR +V   AT+  + A +  ++  +A    D      K LK L +A D R +A
Sbjct:    4 ETLLVKKLSATAVLPARGSALAAGFDLASAYECVIPAHGKALVKTDIAIAIPSGCYARVAPRSGLSWKNHLDVGAGVIDEDYRGNVGVVLFNHANEDFHVKAGDRIAQLILERI--VAQADVQEVDELSDTARGEGGFGSTGV----------------AKRAKVEHAATTSASVAGVDAIVGAIAAIEADLTDAQRKRLKELVVAADDRRFA 198          
BLAST of EWM21304.1 vs. NCBI_GenBank
Match: gi|1173953968|gb|OQS01474.1| (deoxyuridine 5'-triphosphate nucleotidohydrolase [Achlya hypogyna])

HSP 1 Score: 202.216 bits (513), Expect = 1.539e-60
Identity = 101/144 (70.14%), Postives = 117/144 (81.25%), Query Frame = 0
Query:   90 ETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILER-ISMAAVVEVEEGGELPETKRGQGGFGSTGV 232
            ET+ VK+LS  AVLPVRGS  AAG+DLASA + V+PA GKALVKTD++IAIP   YAR+APRSGL+WK H+DVGAGV+D DYRG VGVV+FNH  EDF V  GDR+AQLILER I+ A VVEV+   EL ET RG+GGFGSTGV
Sbjct:    4 ETMLVKKLSATAVLPVRGSALAAGFDLASAYECVIPAHGKALVKTDIAIAIPSGCYARVAPRSGLSWKNHLDVGAGVIDEDYRGNVGVVIFNHANEDFQVKAGDRIAQLILERIIAQADVVEVD---ELSETARGEGGFGSTGV 144          
BLAST of EWM21304.1 vs. NCBI_GenBank
Match: gi|1048066734|ref|XP_017485890.1| (PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase-like [Rhagoletis zephyria])

HSP 1 Score: 198.749 bits (504), Expect = 5.510e-60
Identity = 98/141 (69.50%), Postives = 114/141 (80.85%), Query Frame = 0
Query:   92 LQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGV 232
            L+VKRLS++A LP RGS+ AAGYDL SA D  VPA+GK LVKTD+SIA P   YAR+APRSGLAWK  IDVGAGV+D DYRGPVGV+LFNH  E+F ++RGDR+AQLILERIS   VVEV+   +L ET+R  GGFGSTGV
Sbjct:   24 LKVKRLSENAFLPTRGSKQAAGYDLYSAYDCSVPARGKNLVKTDISIAFPQGYYARVAPRSGLAWKNSIDVGAGVIDVDYRGPVGVILFNHSDEEFRITRGDRIAQLILERISTPDVVEVD---DLDETERNAGGFGSTGV 161          
BLAST of EWM21304.1 vs. NCBI_GenBank
Match: gi|813110877|ref|XP_012195029.1| (hypothetical protein SPRG_01422 [Saprolegnia parasitica CBS 223.65] >gi|641540406|gb|KDO34188.1| hypothetical protein SPRG_01422 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 200.29 bits (508), Expect = 9.797e-60
Identity = 99/149 (66.44%), Postives = 116/149 (77.85%), Query Frame = 0
Query:   90 ETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGVRHQGQL 238
            ETL VK+LS  AVLP RGS  AAG+DLASA + V+PA GKALVKTD++IAIP   YAR+APRSGL+WK H+DVGAGV+D DYRG VGVVLFNH  EDF V  GDR+AQLILERI   A  +V+E  EL +T RG GGFGSTGV  + ++
Sbjct:    4 ETLLVKKLSATAVLPARGSALAAGFDLASAYECVIPAHGKALVKTDIAIAIPSGCYARVAPRSGLSWKNHLDVGAGVIDEDYRGNVGVVLFNHANEDFHVKAGDRIAQLILERI--VAQADVQEVDELSDTARGDGGFGSTGVAKRAKV 150          
BLAST of EWM21304.1 vs. NCBI_GenBank
Match: gi|612388373|ref|XP_007509707.1| (dUTP pyrophosphatase, putative [Bathycoccus prasinos] >gi|412985376|emb|CCO18822.1| dUTP pyrophosphatase, putative [Bathycoccus prasinos])

HSP 1 Score: 199.519 bits (506), Expect = 1.555e-59
Identity = 104/164 (63.41%), Postives = 122/164 (74.39%), Query Frame = 0
Query:   69 TNPIFPPSFRSLCAMSLPRMSETLQVKRLSQHAVLPVRGSEWAAGYDLASAEDTVVPAKGKALVKTDLSIAIPPNTYARIAPRSGLAWKKHIDVGAGVVDYDYRGPVGVVLFNHGTEDFGVSRGDRVAQLILERISMAAVVEVEEGGELPETKRGQGGFGSTGV 232
            TN I   + + + A         L+VK+LS+HA +PVRGS+ AAGYDL++A D VV AK K LVKTDLSIAIP NTYARIAPRSGLA+KK IDV AGVVDYDYRG VGV+L N G EDF V +GDR+AQ+ILERI+    VEVE   +L  T+RG GGFGSTGV
Sbjct:   56 TNEIEKKA-KMMSAEDETLFENKLRVKKLSEHATVPVRGSDGAAGYDLSAAYDCVVKAKSKELVKTDLSIAIPKNTYARIAPRSGLAYKKFIDVLAGVVDYDYRGNVGVILANFGDEDFEVKKGDRIAQMILERITTPECVEVE---DLEATERGAGGFGSTGV 215          
The following BLAST results are available for this feature:
BLAST of EWM21304.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585101483|gb|EWM21304.1|0.000e+0100.00DeoxyUTP pyrophosphatase, dUTPase subfamily [Nanno... [more]
gi|298715640|emb|CBJ28166.1|1.130e-7271.43deoxyuridine 5'-triphosphate nucleotidohydrolase [... [more]
gi|308813425|ref|XP_003084019.1|6.053e-6467.30putative dUTP pyrophosphatase (ISS) [Ostreococcus ... [more]
gi|145355634|ref|XP_001422063.1|1.608e-6373.61predicted protein [Ostreococcus lucimarinus CCE990... [more]
gi|1149600100|gb|OON07523.1|1.188e-6270.07deoxyuridine 5'-triphosphate nucleotidohydrolase [... [more]
gi|669152922|ref|XP_008612023.1|2.366e-6153.99dUTP pyrophosphatase [Saprolegnia diclina VS20] >g... [more]
gi|1173953968|gb|OQS01474.1|1.539e-6070.14deoxyuridine 5'-triphosphate nucleotidohydrolase [... [more]
gi|1048066734|ref|XP_017485890.1|5.510e-6069.50PREDICTED: deoxyuridine 5'-triphosphate nucleotido... [more]
gi|813110877|ref|XP_012195029.1|9.797e-6066.44hypothetical protein SPRG_01422 [Saprolegnia paras... [more]
gi|612388373|ref|XP_007509707.1|1.555e-5963.41dUTP pyrophosphatase, putative [Bathycoccus prasin... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9398rna9398Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications